BAC Information

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BAC

Clone NameB6Ng01-095L14
Chromosome7 (Build37)
Map Location 6,785,406 - 6,882,676
singlet/doubletdoublet
Overlap geneUsp29
Upstream geneV1rd11, LOC100041666, V1rd6, EG384525, EG269859, Nlrp4c, Zfp787, Zfp444, Galp, Zfp371, EG627821, Zfp667, Zfp583, LOC100042467, LOC100042459, Zfp78, Zfp28, LOC100042450, Olfr1344, GA_x5J8B7W3DQU-679632-679375, Olfr1336, Olfr1346, Olfr5, Olfr1347, Olfr1348, Olfr1349, LOC665328, Olfr1350, Zim2, Zim1, Peg3, LOC627961
Downstream geneAurkc, LOC628030, LOC100041822, 5730403M16Rik, 2810409K11Rik, Vmn2r-ps35, Zfp418, BC023179, 6430701C03Rik, Clcn4-2, V2r15, LOC100041866, LOC100042577, Vmn2r31, Vmn2r-ps36, V2r5, LOC100041883, EG628117, Vmn2r33, LOC665470, EG665474, EG628368, LOC100042636, LOC665485, EG625353, Vmn2r-ps40, Vmn2r36, LOC638170
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095L14.bB6Ng01-095L14.g
ACCDH906586DH906587
length1,1691,137
definitionDH906586|Mus musculus domesticus DNA, BAC clone: B6Ng01-095L14, 5' end.DH906587|Mus musculus domesticus DNA, BAC clone: B6Ng01-095L14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(6,785,406 - 6,786,590)(6,881,496 - 6,882,676)
sequence
gaattcaaccctgctagcttacccttcaagctcactgatccccataatcc
catgagccaattccttaatataaaaatcaaccctcccaccctctttgtct
ctctgtctcactctgtatctcttttcttcctcctcctcatctcccttctc
ctcctcctcttcttctctgacctctacagacgtattacactgtatgcaca
tacatgcacaagtatgtatgagtaaatgtaaaaaaaaaaaaaaaaaaggt
ttaaatgagaacactattcctgcatgattttaccttccaaagacataaag
tcctcagatgatgaagagacaactgttattgaggtgatttcatgctatgg
tgaatgctaaaaaagagctaggttaaaatgttacagatgcaccctggtcg
ggcaaacataactcaggtactaactcatctgctcacttacatccatctac
agaacacctgctgtgcattaggcaccgtgtctgctgtgggttcagttgtt
tcctctgtagttctgagtgaagaagaatgaaagtccagagcctatgagat
ggattcgcagtcatctgggaaagagtctaatatgaccccatcacccagac
attccagctgcagatttatgacctggacgaactcttgcacagacagcaag
gaagggaagttaacaatgtctactgcaagccgggcgtggtggcgcacgcc
tttaatcccagcactcgggaggcagaggcaggcagatttctgagttcgag
gcctggtctacagagtgagtttcagaacagccagggctacacagagaaac
cctgtctcaaaaaccaaaaaaaaaaaaaagaaaaaaaaagaaaaaaaaga
tgtgtactgcaatgttcattcatttcatcatatacatatatgtgtatatt
agcagaaatataatatattacctatattgttatacatatataaattatat
actttatatcggatatagtatattaagcattttttattttctttaccaat
actcatcttataatacaaaggtacacacagaggcagaaactgccaacaag
tctggctctgggccctggtgatgtgtggcatgacttataataaaacaaga
tggcatgggataggggtattcaagtgtgttctactcaccaggattttcat
gcacgttcaatgggcagtt
gaattccaaacaattctcaaaacctaatatatgtatgcacatatgtacgt
gcacttatctatctctatatatgtatatgtgtctctatataattagaagt
tgttttgccaattccctttgaaggctattggggttcttctctaatcattt
gccactacaagatatggtgaagaagagaaacaattgagtcagtggttctc
agcctttctgatgctgcagccctttagcacagttcctcgtgttgtgctga
ccctcaaccataaagctattttcgttgcttttcatagctgtaattttgct
actgttgcaaattcaaatgttgatacctgatatgtaccctctgtgaaaag
ctcctttgattctccactgcacaggaaggttctcatttctctctctagca
ccaaagagtttgactgtaaggagtccctttcaagtgtgtgtgccccacgc
tggtgatggtgctttgggaggctggggaaccttcgggggagaagcctagt
tggtacaagtgggtccctggggaagcccttgctggtgtacccagtgtgga
taagtcatttctgttaggcatttttctcactttgagggaaaaagaatctt
ttattcacattacatcccaaccagaagcccccacctcttctcagtcccac
cttcacaaaatccctccccctccacttccttcccttctccccaccctgag
aaggggaagcctgcccttgggtaccaccccacccgggacatctagtcaca
gtaggactagtaatgtgaatttttaaatactaataaattatgggaaaaag
agaaatgttccaaatttcaaagcatttcagattttaaaaatctaatacac
tgataaaatctcataattttatcacatacaactacaaggaatgaggagtt
tgcccaggttagttagttcccattacctattccctgcttcacaggattgg
tctcatgaatcatctgcgtcgtcatcatcatcatcatcatcatcatcaca
tcatcttcaagatatatcacagagattttcttctttctgagacaaggtct
ctatgaccctgctgttctggaacttgctctgtagacagcctagcctcaac
tccaaattcatatctgcctgcctcaggtctgggatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_6785406_6786590
seq2: B6Ng01-095L14.b_49_1217

seq1  GAATTCAACCCTGCTAGCTTACCCTTCAAGCTCACTGATCCCCATAATCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACCCTGCTAGCTTACCCTTCAAGCTCACTGATCCCCATAATCC  50

seq1  CATGAGCCAATTCCTTAATATAAAAATCAACCCTCCCACCCTCTTTGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGCCAATTCCTTAATATAAAAATCAACCCTCCCACCCTCTTTGTCT  100

seq1  CTCTGTCTCACTCTGTATCTCTTTTCTTCCTCCTCCTCATCTCCCTTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCTCACTCTGTATCTCTTTTCTTCCTCCTCCTCATCTCCCTTCTC  150

seq1  CTCCTCCTCTTCTTCTCTGACCTCTACAGACGTATTACACTGTATGCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCTCTTCTTCTCTGACCTCTACAGACGTATTACACTGTATGCACA  200

seq1  TACATGCACAAGTATGTATGAGTAAATGTAAAAAAAAAAAAAAAAAAGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGCACAAGTATGTATGAGTAAATGTAAAAAAAAAAAAAAAAAAGGT  250

seq1  TTAAATGAGAACACTATTCCTGCATGATTTTACCTTCCAAAGACATAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATGAGAACACTATTCCTGCATGATTTTACCTTCCAAAGACATAAAG  300

seq1  TCCTCAGATGATGAAGAGACAACTGTTATTGAGGTGATTTCATGCTATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAGATGATGAAGAGACAACTGTTATTGAGGTGATTTCATGCTATGG  350

seq1  TGAATGCTAAAAAAGAGCTAGGTTAAAATGTTACAGATGCACCCTGGTCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGCTAAAAAAGAGCTAGGTTAAAATGTTACAGATGCACCCTGGTCG  400

seq1  GGCAAACATAACTCAGGTACTAACTCATCTGCTCACTTACATCCATCTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAACATAACTCAGGTACTAACTCATCTGCTCACTTACATCCATCTAC  450

seq1  AGAACACCTGCTGTGCATTAGGCACCGTGTCTGCTGTGGGTTCAGTTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACACCTGCTGTGCATTAGGCACCGTGTCTGCTGTGGGTTCAGTTGTT  500

seq1  TCCTCTGTAGTTCTGAGTGAAGAAGAATGAAAGTCCAGAGCCTATGAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGTAGTTCTGAGTGAAGAAGAATGAAAGTCCAGAGCCTATGAGAT  550

seq1  GGATTCGCAGTCATCTGGGAAAGAGTCTAATATGACCCCATCACCCAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCGCAGTCATCTGGGAAAGAGTCTAATATGACCCCATCACCCAGAC  600

seq1  ATTCCAGCTGCAGATTTATGACCTGGACGAACTCTTGCACAGACAGCAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAGCTGCAGATTTATGACCTGGACGAACTCTTGCACAGACAGCAAG  650

seq1  GAAGGGAAGTTAACAATGTCTACTGCAAGCCGGGCGTGGTGGCGCACGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGAAGTTAACAATGTCTACTGCAAGCCGGGCGTGGTGGCGCACGCC  700

seq1  TTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAG  750

seq1  GCCTGGTCTACAGAGTGAGTTTCAGAACAGCCAGGGCTACACAGAGAAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGTCTACAGAGTGAGTTTCAGAACAGCCAGGGCTACACAGAGAAAC  800

seq1  CCTGTCTCAAAAAACCAAAAAAAAAAAAAAGAAAAAAAAAAGAAAAAAAA  850
      |||||||| |||||||||||||||||||||| ||||||||||||||||||
seq2  CCTGTCTC-AAAAACCAAAAAAAAAAAAAAG-AAAAAAAAAGAAAAAAAA  848

seq1  AGAATGTGTACTGCAATGTTCATTCATTTCATCAATATACATATATGTGT  900
         |||||||||||||||||||||||||||||| ||||||||||||||||
seq2  --GATGTGTACTGCAATGTTCATTCATTTCATC-ATATACATATATGTGT  895

seq1  ATATTAGCAGATATATAATATATTACCTATATTGTTATTACATATTATAA  950
      ||||||||||| ||||||||||||||||||||||||| |||||| |||||
seq2  ATATTAGCAGAAATATAATATATTACCTATATTGTTA-TACATA-TATAA  943

seq1  ATTATATACTTTATATTCAGATATAGTATATT-AGCATATCT--ATATCT  997
      ||||||||||||||| || ||||||||||||| ||||| | |   | |||
seq2  ATTATATACTTTATA-TCGGATATAGTATATTAAGCATTTTTTATTTTCT  992

seq1  ATACCCATACTCATC-TATACATACATAGTACACACACAGAGGCAGAAAC  1046
       |||| ||||||||| |||| ||||| ||   ||||||||||||||||||
seq2  TTACCAATACTCATCTTATA-ATACAAAG-GTACACACAGAGGCAGAAAC  1040

seq1  TGCACACAAGGTCT-GCTCTGGGCACTGGTGATGTGTGGCATGACTTATA  1095
      |||  |||| |||| ||||||||| |||||||||||||||||||||||||
seq2  TGCCAACAA-GTCTGGCTCTGGGCCCTGGTGATGTGTGGCATGACTTATA  1089

seq1  ATAAAAACAAGATAGGCATGGGGATAGGGGGTACTCAAAGTGTG-TCTAC  1144
      || |||||||||| ||||| |||||| |||||| || ||||||| |||||
seq2  AT-AAAACAAGAT-GGCAT-GGGATA-GGGGTATTC-AAGTGTGTTCTAC  1134

seq1  TCAACCCAGGTATGTTCATGGGACAGGTAAGATGGGCAGTT  1185
      |||  ||||| || ||||||   || ||   ||||||||||
seq2  TCA--CCAGG-ATTTTCATG---CACGTTCAATGGGCAGTT  1169

seq1: chr7_6881496_6882676
seq2: B6Ng01-095L14.g_65_1201 (reverse)

seq1  TAATCCCAGCACTTGGGAGGCAGAGGCAGATA-GATTATTGTGAGTTTGA  49
      |||||||||  ||   |||||  ||||||||| ||  |||  ||| ||||
seq2  TAATCCCAGACCT---GAGGC--AGGCAGATATGA--ATTTGGAG-TTGA  42

seq1  GGCTAGCCTGGTCTACAGAGCAAGTTCCAGGACAGCCAGGGTTACATAGA  99
      |||||| || |||||||||||||||||||| |||| ||||||  ||||||
seq2  GGCTAGGCT-GTCTACAGAGCAAGTTCCAGAACAG-CAGGGT--CATAGA  88

seq1  GGAACCTTGTCTCAGAAAGAAAGAAAATCTACATGATAGATATATACATA  149
      |  |||||||||||||||| ||||||||||   ||||| || |       
seq2  G--ACCTTGTCTCAGAAAG-AAGAAAATCTCTGTGATATATCT-------  128

seq1  GAAAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA  199
        ||||| |||     ||| ||| ||| ||| ||| ||| ||| ||| ||
seq2  TGAAGAT-GAT---GTGAT-GAT-GAT-GAT-GAT-GAT-GAT-GAT-GA  166

seq1  CAGACAGACAGATAGATATCATGAAGACAAATACTGTGAAGCAGGGAATA  249
      | |||   ||||| ||| ||||| |||| ||| |||||||||||||||||
seq2  C-GAC--GCAGAT-GAT-TCATG-AGACCAATCCTGTGAAGCAGGGAATA  210

seq1  GGTAATTGGAACTAACTAACCTGGGCAAACTTCCTCATTCCTTGTAGTTG  299
      |||||| ||||||||||||||||||||||| |||||||||||||||||||
seq2  GGTAATGGGAACTAACTAACCTGGGCAAAC-TCCTCATTCCTTGTAGTTG  259

seq1  TATGTGATAAAATTATGAGATTTTATCAGTTGTATTAGATTTTTTAAAAT  349
      ||||||||||||||||||||||||||||| ||||||||| ||||||||||
seq2  TATGTGATAAAATTATGAGATTTTATCAG-TGTATTAGA-TTTTTAAAAT  307

seq1  CTGAAATGCTTTGAAATTTGGAACATTTCTCTTTTTTCCCATAATTTATT  399
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CTGAAATGCTTTGAAATTTGGAACATTTCTC-TTTTTCCCATAATTTATT  356

seq1  AGTATTTTAAAAATTCACATTACTAGTCCTACTGTGACTAGATGTCCCGG  449
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTA-TTTAAAAATTCACATTACTAGTCCTACTGTGACTAGATGTCCCGG  405

seq1  GTGGGGTGGTACCCAAGGGCAGGCTTCCCCTTCTCAGGGTGGGGAGAAGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGTGGTACCCAAGGGCAGGCTTCCCCTTCTCAGGGTGGGGAGAAGG  455

seq1  GAAGGAAGTGGAGGGGGAGGGATTTTGTGAAGGTGGGACTGAGAAGAGGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAAGTGGAGGGGGAGGGATTTTGTGAAGGTGGGACTGAGAAGAGGT  505

seq1  GGGGGCTTCTGGTTGGGATGTAATGTGAATAAAAGATTCTTTTTCCCTCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGCTTCTGGTTGGGATGTAATGTGAATAAAAGATTCTTTTTCCCTCA  555

seq1  AAGTGAGAAAAATGCCTAACAGAAATGACTTATCCACACTGGGTACACCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAGAAAAATGCCTAACAGAAATGACTTATCCACACTGGGTACACCA  605

seq1  GCAAGGGCTTCCCCAGGGACCCACTTGTACCAACTAGGCTTCTCCCCCGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGGCTTCCCCAGGGACCCACTTGTACCAACTAGGCTTCTCCCCCGA  655

seq1  AGGTTCCCCAGCCTCCCAAAGCACCATCACCAGCGTGGGGCACACACACT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCCCCAGCCTCCCAAAGCACCATCACCAGCGTGGGGCACACACACT  705

seq1  TGAAAGGGACTCCTTACAGTCAAACTCTTTGGTGCTAGAGAGAGAAATGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGGGACTCCTTACAGTCAAACTCTTTGGTGCTAGAGAGAGAAATGA  755

seq1  GAACCTTCCTGTGCAGTGGAGAATCAAAGGAGCTTTTCACAGAGGGTACA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTTCCTGTGCAGTGGAGAATCAAAGGAGCTTTTCACAGAGGGTACA  805

seq1  TATCAGGTATCAACATTTGAATTTGCAACAGTAGCAAAATTACAGCTATG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGGTATCAACATTTGAATTTGCAACAGTAGCAAAATTACAGCTATG  855

seq1  AAAAGCAACGAAAATAGCTTTATGGTTGAGGGTCAGCACAACACGAGGAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCAACGAAAATAGCTTTATGGTTGAGGGTCAGCACAACACGAGGAA  905

seq1  CTGTGCTAAAGGGCTGCAGCATCAGAAAGGCTGAGAACCACTGACTCAAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCTAAAGGGCTGCAGCATCAGAAAGGCTGAGAACCACTGACTCAAT  955

seq1  TGTTTCTCTTCTTCACCATATCTTGTAGTGGCAAATGATTAGAGAAGAAC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTCTTCTTCACCATATCTTGTAGTGGCAAATGATTAGAGAAGAAC  1005

seq1  CCCAATAGCCTTCAAAGGGAATTGGCAAAACAACTTCTAATTATATAGAG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAATAGCCTTCAAAGGGAATTGGCAAAACAACTTCTAATTATATAGAG  1055

seq1  ACACATATACATATATAGAGATAGATAAGTGCACGTACATATGTGCATAC  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATATACATATATAGAGATAGATAAGTGCACGTACATATGTGCATAC  1105

seq1  ATATATTAGGTTTTGAGAATTGTTTGGAATTC  1181
      ||||||||||||||||||||||||||||||||
seq2  ATATATTAGGTTTTGAGAATTGTTTGGAATTC  1137