BAC Information

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BAC

Clone NameB6Ng01-096A20
Chromosome7 (Build37)
Map Location 111,348,434 - 111,484,304
singlet/doubletdoublet
Overlap geneOlfr650-ps1, Trim6, LOC667497, EG667823, Trim12, Trim34
Upstream geneOlfr593, Olfr594, Olfr595-ps1, Usp17, Dub2a, LOC100041187, Olfr597, GA_x5J8B7TU1BB-380-666, Olfr598, Olfr599, Olfr600, Olfr601, Olfr602-ps1, Olfr604, Olfr596-ps1, Dub2, Olfr605, Olfr606, EG546989, Olfr608, Olfr609, Olfr610, Olfr611, EG545985, Olfr614, Olfr615, Olfr616, LOC100042167, Olfr617, Olfr618, Olfr619, Olfr620, LOC667639, Olfr622, Olfr623, Olfr624, Olfr625-ps1, Olfr261-ps1, Olfr260-ps1, Olfr627, Olfr1526-ps1, Olfr629, Olfr630, Olfr69, Olfr68, Olfr67, Hbb-b1, EG436003, Hbb-bh1, Hbb-y, Olfr66, Olfr64, Olfr65, Olfr631, Olfr632, Olfr633, Olfr634-ps1, LOC233614, Olfr635, Olfr636-ps1, Olfr637-ps1, Olfr638, Olfr639, Olfr640, Olfr641, Olfr642, Olfr643, Olfr644, Olfr645, Olfr646, 4931431F19Rik, Ubqln3, Ubqlnl, E030002O03Rik, Olfr647-ps1, Olfr648, Olfr649
Downstream gene9230105E10Rik, A530023O14Rik, EG434219, LOC100041595, Trim30, AI451617, LOC672495, LOC625305, EG625321, Olfr651, Olfr652, Olfr653, Olfr654, Olfr655, Olfr656, Olfr657, Olfr658, LOC667882, Olfr659, GA_x5J8B7W3SPQ-80592-80214, Olfr661, LOC625495, Olfr662-ps1, Olfr663, Olfr664, EG625530, LOC100042613, LOC233637, Dub1a, Dub1, Olfr665, Olfr666, Olfr667, Olfr668, Olfr669, EG545987, Olfr670, Olfr671, Olfr672, GA_x5J8B7W6B6J-189947-189022, Olfr674-ps1, Olfr675, Olfr676, Olfr677, LOC667987, Olfr678, Olfr679, Olfr680-ps1, Olfr681, Olfr682-ps1, Olfr683, Olfr684, Olfr685, Olfr686, EG668035, Olfr688, Olfr689, Olfr690
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-096A20.bB6Ng01-096A20.g
ACCDH906819DH906820
length1,1421,050
definitionDH906819|Mus musculus domesticus DNA, BAC clone: B6Ng01-096A20, 5' end.DH906820|Mus musculus domesticus DNA, BAC clone: B6Ng01-096A20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(111,483,147 - 111,484,304)(111,348,434 - 111,349,500)
sequence
gaattcttatgtgtatgaggtaacacaggagacagaggtgataaggccac
attgaaccacacacttgtgaaaggtgatcagaacacagtgatttcaacat
ctgcaacttcttaccccagtaggcccggacagctgatagctctgaaatga
taaaacatttggagacttttattagaagcaaagattcgaaagaggtaata
ctttgctctctctagaggtaagaaagggtggtataagaagaggtttatga
gaggcttaaaaaagtttaaaggtcctctctggtaaacaagaacactttag
ggtgctccctcggacacagctgtatcgtcctcctcacagaacacccctcc
ctgacttccctgctatctttaccatagaaactgcctgctgctctcctcac
ctctgaacttttgtagcatgccactcagatcaggagcttggaataccatg
ctcagtttcttagaaactgcttttggcttcttcagtgtccagatctgact
cctagggatggagaaatagtttaatctttacatctgtcatgttgttgtct
tgctaacacaatggcctttctctccttccacatcactgatgtgcttcata
cctgaggatcctaaaggaaagccctgactgtgaatcagaagccacaggcc
tctgtgaaatgttccctgtgacactgggaggatctaaccctcttgaagtc
acagctgcctcttcttaatatggggtagctttcatctcttgaaatctcat
ggtaataatataaatttgggtgaaaagcatcggaatgacattggcacagc
actgagggtgcggtgaggacctatgagttctcaaggaaattgagagcaag
gctgtaggtcctggctgtgatgtaggactcataaactaactgcctgtgag
tttgtgagtagtccgaagcctgggttccacacacacaccacaccccatgc
cccatatagataacagatggttcttctgggggagaagaaagcctgactct
aggtatgatccacatcagagatacatgttttgggggaaagccttgctaaa
gaaagttatgctaaatgaatgtgtcaggcagacttagagcttctgtcttt
aaataatcagacagctatcgaacctatcttattaccaaaagc
gaattccctcaaaaatcacttgggaattcggaaggatgggaagaacccag
cagcaactggcaccaactggtcagtaggtggcgctaatggagcacccaga
gagtgctgtcaatgcccgtccaaagggggcggtgcacacctgagagggaa
cttctgcagacaggccctcctctataactaaacagtgactgatagagata
agagagtgaagagtgaaccactcccgcatataatgagaaatttgctttga
cttttgatcataaggaaaggaaaactcataccagaaaacataatgacact
aaaaataacagcagggactagcaatgcctatcagtcgatagcacacacaa
ggccccaagtgcaatccttagtacctcattaaccagggatgctgtcatac
ctctgtaatcgtccacttcaaaggtggaggcaggagaatagatcaaaaat
ttaagatcatcctcaactatatagatgacttccagccagcctgggctaca
tgaagcctgtttcaaaaaaaaaaaaaaattgtcaaatatttaaatgaaca
aaacaaccctccctattgtttgcttaaaacactgcattagttgttgtctg
gctaatacaataaaacaccaaaccaaagcaacttaaggaaagaagggttt
attctggctccagtatatggtggcagcaggtcacattgcatctacagtca
agacacagagagatatgaactctggaactcagctcatcttcctttttatg
tctgatctgccagatatggtgggtcctctagcctcaatcttatctggcaa
gccctcacaaacaagcccaagctttgtcctaagaccgtggcgcatacaat
cagtacacaccatgtaagtgtaaggattcctcgggttccctgaggaaagt
atggggaagagagcagtgaagtgtatagttgtggcatgagacatggtctc
cactcagtgagatgaagtattgactggaaagattcagatcatcagtagaa
gtgaagttagcatttattgaatggtgttctacacgattgaagcacaggat

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_111483147_111484304
seq2: B6Ng01-096A20.b_38_1180 (reverse)

seq1  GCTTTTGTGTAATAAAGATGAGTTCG-TAGCTGTCCTGATTAATTTTAAA  49
      ||||||| ||||| |||||  ||||| ||||||| |||||||  ||||||
seq2  GCTTTTG-GTAAT-AAGATAGGTTCGATAGCTGT-CTGATTA--TTTAAA  45

seq1  GACAGGAGCCTCTAAGTCTGCCTGACCACATTCATTTTAAGCAATAACTT  99
      ||||| || |||||||||||||||| |||||||||||  ||| ||||| |
seq2  GACAGAAG-CTCTAAGTCTGCCTGA-CACATTCATTT--AGC-ATAAC-T  89

seq1  TTCTTTTGCAAGGCTTTCCCCCATAACAATGTTATCTCTGATGTGGATCA  149
      |||||| |||||||||||||||| ||| ||| ||||||||||||||||||
seq2  TTCTTTAGCAAGGCTTTCCCCCAAAAC-ATG-TATCTCTGATGTGGATCA  137

seq1  TACCTAGAGTTCAGGCTTTCTTCTTCCCCCAGAAGAACCATCTGTTATCT  199
      ||||||||| ||||||||||||| ||||||||||||||||||||||||||
seq2  TACCTAGAG-TCAGGCTTTCTTC-TCCCCCAGAAGAACCATCTGTTATCT  185

seq1  ATATGGGGCATGGGGTGTGGTGTGTGTGTGGAACCCAGGCTTCGGACTAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGGGCATGGGGTGTGGTGTGTGTGTGGAACCCAGGCTTCGGACTAC  235

seq1  TCACAAACTCACAGGCAGTTAGTTTATGAGTCCTACATCACAGCCAGGAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAACTCACAGGCAGTTAGTTTATGAGTCCTACATCACAGCCAGGAC  285

seq1  CTACAGCCTTGCTCTCAATTTCCTTGAGAACTCATAGGTCCTCACCGCAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGCCTTGCTCTCAATTTCCTTGAGAACTCATAGGTCCTCACCGCAC  335

seq1  CCTCAGTGCTGTGCCAATGTCATTCCGATGCTTTTCACCCAAATTTATAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGTGCTGTGCCAATGTCATTCCGATGCTTTTCACCCAAATTTATAT  385

seq1  TATTACCATGAGATTTCAAGAGATGAAAGCTACCCCATATTAAGAAGAGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACCATGAGATTTCAAGAGATGAAAGCTACCCCATATTAAGAAGAGG  435

seq1  CAGCTGTGACTTCAAGAGGGTTAGATCCTCCCAGTGTCACAGGGAACATT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGTGACTTCAAGAGGGTTAGATCCTCCCAGTGTCACAGGGAACATT  485

seq1  TCACAGAGGCCTGTGGCTTCTGATTCACAGTCAGGGCTTTCCTTTAGGAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGAGGCCTGTGGCTTCTGATTCACAGTCAGGGCTTTCCTTTAGGAT  535

seq1  CCTCAGGTATGAAGCACATCAGTGATGTGGAAGGAGAGAAAGGCCATTGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGGTATGAAGCACATCAGTGATGTGGAAGGAGAGAAAGGCCATTGT  585

seq1  GTTAGCAAGACAACAACATGACAGATGTAAAGATTAAACTATTTCTCCAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGCAAGACAACAACATGACAGATGTAAAGATTAAACTATTTCTCCAT  635

seq1  CCCTAGGAGTCAGATCTGGACACTGAAGAAGCCAAAAGCAGTTTCTAAGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAGGAGTCAGATCTGGACACTGAAGAAGCCAAAAGCAGTTTCTAAGA  685

seq1  AACTGAGCATGGTATTCCAAGCTCCTGATCTGAGTGGCATGCTACAAAAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAGCATGGTATTCCAAGCTCCTGATCTGAGTGGCATGCTACAAAAG  735

seq1  TTCAGAGGTGAGGAGAGCAGCAGGCAGTTTCTATGGTAAAGATAGCAGGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAGGTGAGGAGAGCAGCAGGCAGTTTCTATGGTAAAGATAGCAGGG  785

seq1  AAGTCAGGGAGGGGTGTTCTGTGAGGAGGACGATACAGCTGTGTCCGAGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAGGGAGGGGTGTTCTGTGAGGAGGACGATACAGCTGTGTCCGAGG  835

seq1  GAGCACCCTAAAGTGTTCTTGTTTACCAGAGAGGACCTTTAAACTTTTTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACCCTAAAGTGTTCTTGTTTACCAGAGAGGACCTTTAAACTTTTTT  885

seq1  AAGCCTCTCATAAACCTCTTCTTATACCACCCTTTCTTACCTCTAGAGAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTCTCATAAACCTCTTCTTATACCACCCTTTCTTACCTCTAGAGAG  935

seq1  AGCAAAGTATTACCTCTTTCGAATCTTTGCTTCTAATAAAAGTCTCCAAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAGTATTACCTCTTTCGAATCTTTGCTTCTAATAAAAGTCTCCAAA  985

seq1  TGTTTTATCATTTCAGAGCTATCAGCTGTCCGGGCCTACTGGGGTAAGAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTATCATTTCAGAGCTATCAGCTGTCCGGGCCTACTGGGGTAAGAA  1035

seq1  GTTGCAGATGTTGAAATCACTGTGTTCTGATCACCTTTCACAAGTGTGTG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCAGATGTTGAAATCACTGTGTTCTGATCACCTTTCACAAGTGTGTG  1085

seq1  GTTCAATGTGGCCTTATCACCTCTGTCTCCTGTGTTACCTCATACACATA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAATGTGGCCTTATCACCTCTGTCTCCTGTGTTACCTCATACACATA  1135

seq1  ATGAATTCC  1158
      | |||||||
seq2  A-GAATTCC  1143

seq1: chr7_111348434_111349500
seq2: B6Ng01-096A20.g_66_1115

seq1  GAATTCCCTCAAAAATCACTTGGGAATTCGGAAGGATGGGAAGAACCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTCAAAAATCACTTGGGAATTCGGAAGGATGGGAAGAACCCAG  50

seq1  CAGCAACTGGCACCAACTGGTCAGTAGGTGGCGCTAATGGAGCACCCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAACTGGCACCAACTGGTCAGTAGGTGGCGCTAATGGAGCACCCAGA  100

seq1  GAGTGCTGTCAATGCCCGTCCAAAGGGGGCGGTGCACACCTGAGAGGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCTGTCAATGCCCGTCCAAAGGGGGCGGTGCACACCTGAGAGGGAA  150

seq1  CTTCTGCAGACAGGCCCTCCTCTATAACTAAGCAGTGACTGATAGAGATA  200
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CTTCTGCAGACAGGCCCTCCTCTATAACTAAACAGTGACTGATAGAGATA  200

seq1  AGAGAGTGAAGAGTGAACCACTCCCGCATATAATGAGAAATTTGCTTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGTGAAGAGTGAACCACTCCCGCATATAATGAGAAATTTGCTTTGA  250

seq1  CTTTTGATCATAAGGAAAGGAAAACTCATACCAGAAAACATAATGACACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGATCATAAGGAAAGGAAAACTCATACCAGAAAACATAATGACACT  300

seq1  AAAAATAACAGCAGGGACTAGCAATGCCTATCAGTCGATAGCACACACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAACAGCAGGGACTAGCAATGCCTATCAGTCGATAGCACACACAA  350

seq1  GGCCCCAAGTGCAATCCTTAGTACCTCATTAACCAGGGATGCTGTCATAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCCAAGTGCAATCCTTAGTACCTCATTAACCAGGGATGCTGTCATAC  400

seq1  CTCTGTAATCGTCCACTTCAAAGGTGGAGGCAGGAGAATAGATCAAAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTAATCGTCCACTTCAAAGGTGGAGGCAGGAGAATAGATCAAAAAT  450

seq1  TTAAGATCATCCTCAACTATATAGATGACTTCCAGCCAGCCTGGGCTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGATCATCCTCAACTATATAGATGACTTCCAGCCAGCCTGGGCTACA  500

seq1  TGAAGCCTGTTTCAAAAAAAAAAAAAAATTGTCAAATATTTAAATGAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCCTGTTTCAAAAAAAAAAAAAAATTGTCAAATATTTAAATGAACA  550

seq1  AAACAACCCTCCCTATTGTTTGCTTAAAACACTGCATTAGTTGTTGTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAACCCTCCCTATTGTTTGCTTAAAACACTGCATTAGTTGTTGTCTG  600

seq1  GCTAATACAATAAAACACCAAACCAAAGCAACTTAAGGAAAGAAGGGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATACAATAAAACACCAAACCAAAGCAACTTAAGGAAAGAAGGGTTT  650

seq1  ATTCTGGCTCCAGTATATGGTGGCAGCAGGTCACATTGCATCTACAGTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGGCTCCAGTATATGGTGGCAGCAGGTCACATTGCATCTACAGTCA  700

seq1  GGACACAGAGAGATATGAACTCTGGAACTCAGCTCATCTTCCTTTTTATG  750
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACAGAGAGATATGAACTCTGGAACTCAGCTCATCTTCCTTTTTATG  750

seq1  TCTGATCTGCCAGATATGGTGGGTCCTCTAGCCTCAATCTTATCTGGCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATCTGCCAGATATGGTGGGTCCTCTAGCCTCAATCTTATCTGGCAA  800

seq1  GCCCTCACAAACAAGCCCAAAGCTTTGTCCTAAGACCGTGGCGCATACAA  850
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GCCCTCACAAACAAGCCC-AAGCTTTGTCCTAAGACCGTGGCGCATACAA  849

seq1  TCAGTACACACCATGTAAGTGTAAGGGATTCCTCGGG-TCCCTGAGGAAA  899
      |||||||||||||||||||||||| |||||||||||| ||||||||||||
seq2  TCAGTACACACCATGTAAGTGTAA-GGATTCCTCGGGTTCCCTGAGGAAA  898

seq1  GTATGGGGAAGAGAGCAGTGAAGTGGAGAGTTGGTGGCAGGAGGACAAGG  949
      ||||||||||||||||||||||||| | |||| |||||| || ||| | |
seq2  GTATGGGGAAGAGAGCAGTGAAGTGTATAGTT-GTGGCATGA-GAC-ATG  945

seq1  GTCTCCACTCAGGTGAAGATGAGAGTATTGACAGGAAAGGATTTCAGGAT  999
      ||||||||||| ||| |||||| ||||||||| ||||||   |||| |||
seq2  GTCTCCACTCA-GTG-AGATGA-AGTATTGACTGGAAAG--ATTCA-GAT  989

seq1  CAATCAGTAGGAAGTGAAGTTAGCATTTATTTGGATGGTGTTCTAACACG  1049
      | ||||||| ||||||||||||||||||| ||| |||||||||| |||||
seq2  C-ATCAGTA-GAAGTGAAGTTAGCATTTA-TTGAATGGTGTTCT-ACACG  1035

seq1  GAATTTAAGCACAAGGAT  1067
        ||| |||||| |||||
seq2  --ATTGAAGCAC-AGGAT  1050