BAC Information

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BAC

Clone NameB6Ng01-097J22
Chromosome7 (Build37)
Map Location 30,026,598 - 30,027,738
singlet/doubletsinglet
Overlap geneYif1b
Upstream geneEid2, LOC434156, BC089491, Dll3, Timm50, Supt5h, Rps16, Plekhg2, Zfp36, Ixl, Paf1, Samd4b, 1700085B13Rik, Gmfg, Lrfn1, LOC624672, 1700028B04Rik, EG330496, Il28, Sycn, 1190020J12Rik, Pak4, C330005M16Rik, Fbxo27, Fbxo17, Mrps12, Sars2, EG624918, Nfkbib, Sirt2, 5830482F20Rik, Hnrpl, Ech1, Lgals4, Lgals7, Capn12, Actn4, Eif3s12, Map4k1, Ryr1, Rasgrp4, 1110006G06Rik, Spred3, Ggn, Psmd8, A230107C01Rik, Kcnk6
Downstream geneSpint2, Ppp1r14a, Neud4, Sipa1l3, LOC100043791, 4932431P20Rik, 4930432E11Rik, 1700067C01Rik, Zfp84, LOC100043794, Zfp30, EG625349, 6330581L23Rik, BC027344, Zfp420, Zfp27, Zfp74, LOC625437, LOC100043796, Zfp568, Zfp14, LOC100043798, Zfp82, Zfp566, Zfp260, Zfp382, Zfp146, EG330503, Cox7a1, Capns1, Tbcb, Polr2i, Ovol3, Wdr62
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097J22.bB6Ng01-097J22.g
ACCDH907943DH907944
length1,2341,132
definitionDH907943|Mus musculus domesticus DNA, BAC clone: B6Ng01-097J22, 5' end.DH907944|Mus musculus domesticus DNA, BAC clone: B6Ng01-097J22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgggaactccaagtatataggccccaggtggttggtggttgcag
tttgttaagtagttgtgtgcaaagaagaaacaacaaaaaggagaaatcag
atatcctgatggtgaagttcaaacttggctgtagtcagcaggaagtagtc
taagggccatcccctctctgcccccagctttactaaggggcctctttcct
ttcttctgtatccttttttctttcttatctagtgttaaggagttgaaagg
gtgggagaaagggatggaaaagcatgaaagaaagagaaacccacagagta
acaaagccaagctacggatctcagtgagttcaatgccagccttgtcgagg
tagtgggttcctagccagctagagctacatagtgagactcagtctcagaa
ataagtaagggagctggaaagatgactctgtgcttaaaaaaagcacttgt
tcttgccaagaatcggggctcagttcccagtacccacacggtggctcaca
cccattacaactccagttccaagggacctgatgccctctgcaggcatcgg
gcacccatgtggtacacatatatacatgcaggcaaaatggtcatacacaa
ataaaagtaaatgtatctaaaaaggttttaattaaaatatatatatattt
aaattttccttagatgaaggggcagaagaacagttttgttccctggaaag
gacagagaattgtccccaggggcccctgtcccagctgcaaagctgggtga
ggagcacagagggaggggacaggactctcctgtcttccctcttccttgca
tgtagatccaagggggggtaggcgccagaaccctggctggacttgaaggg
caggtgtgttgtatactcctcctcctcctcctcagggatgcctccttacc
ctgcctctgtccctctcctgtgtctttccaggcctgtcagtttcccagaa
acacctttttgcagcatcaccagcaggggccgacagagtcccttcctacg
acagcttctgggagcttctccaccccatggctcgccacctacgcaagata
caagccttctcccatgaaggtccaagttccctttgtgctttgaatgaagt
catcgggggattgccggtgcagatttttttctaggaaagtacctccacat
atcctatccacattgttatgggtttatggactctccatctaggtctcgaa
atcagacacaccgtatttggtgcaggttctccat
gaattccaaggccttgtcatctggcctgaatagccagatcagcaagctac
aggttcagtgagagatctggtctcagactgggaggtggagagtgagaaag
acagctgtggttggcctcagcacacaggtccaccctgcactcgagcgcac
acaaacacatacacgtgtacacgtggcatttgagacatggctcattagtt
aagaacacttgttgctcctgcccctagcacccacatggtggttcacatat
aaagtcagtctttagaaacaaagtggcacacattcacagtgcctcagcct
cctgagtgctggggctgcagatgagaaggaccatggccagctgtccacgt
agtctatgggtgtagactgcaggttcaccatggtctgactgttcctccca
gtgtgcagttcccagtgctcagcagccaatatctgggacccaggggctac
cccatctctgcagacactgcctcccacccctgcttagaccagtctgaaaa
ggtaggggattcctctctctccctttcctcagcccagctctacgcagctt
ccatgttccactggccccctggctcagtacttaaatggccactttccatg
tccccagctctgttcgccatgctctctagcctgacccactcagcagtctc
cacttcccgggttccccccaagaagtcagatggaacttttacaggtagct
ctggggttttgttttggttttatgccatgcaggggaattgaaccctggac
cttgtatgtggacactggaggtcaacctcgtatgtcatcctttcaggcac
tagctaccttgggtttggggttgcttttgttatcgtatttatttatttat
ttatttatttattatttgggttttacaagacagggtttctctgtgtagcc
ctggctgtcctgaactcactttgtaaaccaggctggcctagaactcagaa
atccgcctgcctctgctcccaagtgctggaattaatggtgtgcacaacca
cctacggcgtcttaaattttttatttgttgtgactgtgtgtaaggtaaag
ccgaaaaaggcgccccctggagccacagtcttgttggtcatgggtacctg
tgattaggtcttcccaaaagacgaccagtact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_30026598_30027738
seq2: B6Ng01-097J22.g_68_1199

seq1  GAATTCCAAGGCCTTGTCATCTGGCCTGAATAGCCAGATCAGCAAGCTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGGCCTTGTCATCTGGCCTGAATAGCCAGATCAGCAAGCTAC  50

seq1  AGGTTCAGTGAGAGATCTGGTCTCAGACTGGGAGGTGGAGAGTGAGAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCAGTGAGAGATCTGGTCTCAGACTGGGAGGTGGAGAGTGAGAAAG  100

seq1  ACAGCTGTGGTTGGCCTCAGCACACAGGTCCACCCTGCACTCGAGCGCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTGTGGTTGGCCTCAGCACACAGGTCCACCCTGCACTCGAGCGCAC  150

seq1  ACAAACACATACACGTGTACACGTGGCATTTGAGACATGGCTCATTAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACACATACACGTGTACACGTGGCATTTGAGACATGGCTCATTAGTT  200

seq1  AAGAACACTTGTTGCTCCTGCCCCTAGCACCCACATGGTGGTTCACATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACACTTGTTGCTCCTGCCCCTAGCACCCACATGGTGGTTCACATAT  250

seq1  AAAGTCAGTCTTTAGAAACAAAGTGGCACACATTCACAGTGCCTCAGCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCAGTCTTTAGAAACAAAGTGGCACACATTCACAGTGCCTCAGCCT  300

seq1  CCTGAGTGCTGGGGCTGCAGATGAGAAGGACCATGGCCAGCTGTCCACGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGTGCTGGGGCTGCAGATGAGAAGGACCATGGCCAGCTGTCCACGT  350

seq1  AGTCTATGGGTGTAGACTGCAGGTTCACCATGGTCTGACTGTTCCTCCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTATGGGTGTAGACTGCAGGTTCACCATGGTCTGACTGTTCCTCCCA  400

seq1  GTGTGCAGTTCCCAGTGCTCAGCAGCCAATATCTGGGACCCAGGGGCTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCAGTTCCCAGTGCTCAGCAGCCAATATCTGGGACCCAGGGGCTAC  450

seq1  CCCATCTCTGCAGACACTGCCTCCCACCCCTGCTTAGACCAGTCTGAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCTCTGCAGACACTGCCTCCCACCCCTGCTTAGACCAGTCTGAAAA  500

seq1  GGTAGGGGATTCCTCTCTCTCCCTTTCCTCAGCCCAGCTCTACGCAGCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGGGGATTCCTCTCTCTCCCTTTCCTCAGCCCAGCTCTACGCAGCTT  550

seq1  CCATGTTCCACTGGCCCCCTGGCTCAGTACTTAAATGGCCACTTTCCATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTTCCACTGGCCCCCTGGCTCAGTACTTAAATGGCCACTTTCCATG  600

seq1  TCCCCAGCTCTGTTCGCCATGCTCTCTAGCCTGACCCACTCAGCAGTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAGCTCTGTTCGCCATGCTCTCTAGCCTGACCCACTCAGCAGTCTC  650

seq1  CACTTCCCGGGTTCCCCCCAAGAAGTCAGATGGAACTTTTACAGGTAGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCCCGGGTTCCCCCCAAGAAGTCAGATGGAACTTTTACAGGTAGCT  700

seq1  CTGGGGTTTTGTTTTGGTTTTATGCCATGCAGGGGAATTGAACCCTGGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGTTTTGTTTTGGTTTTATGCCATGCAGGGGAATTGAACCCTGGAC  750

seq1  CTTGTATGTGGACACTGGAGGTCAACCTCGTATGTCATCC-TTCAGGCAC  799
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CTTGTATGTGGACACTGGAGGTCAACCTCGTATGTCATCCTTTCAGGCAC  800

seq1  TAGCTACCTTGGGTTTGGGGTTGCTTTTGTTATCGTATTTATTTATTTAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTACCTTGGGTTTGGGGTTGCTTTTGTTATCGTATTTATTTATTTAT  850

seq1  TTATTTATTTATTTATTTGGTTTTACAAGACAGGGTTTCTCTGTGTAGCC  899
      |||||||||||||  || ||||||||||||||||||||||||||||||||
seq2  TTATTTATTTATTATTTGGGTTTTACAAGACAGGGTTTCTCTGTGTAGCC  900

seq1  CTGGCTGTCCTGGAACTCACTTTGTAAACCAGGCTGGCCTAGAACTCAGA  949
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTGTCCT-GAACTCACTTTGTAAACCAGGCTGGCCTAGAACTCAGA  949

seq1  AATCCGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTGCACTAC  999
      |||||||||||||||| |||||||||||||| ||||| ||||||||| ||
seq2  AATCCGCCTGCCTCTG-CTCCCAAGTGCTGGAATTAATGGTGTGCACAAC  998

seq1  CACCTACCGGCGTCTTTAATTTTTTTATTTG-TGTGACTGTGTGTAAAGG  1048
      |||||| ||||||| |||| ||||||||||| ||||||||||||| ||||
seq2  CACCTA-CGGCGTC-TTAAATTTTTTATTTGTTGTGACTGTGTGT-AAGG  1045

seq1  TAGAGGCCAGAAGGGCG-CCCCTGGAGCCAACCAGTTCCCTGGTGGTCAT  1097
      || || | | || |||| ||||||||||||  ||||  | || |||||||
seq2  TAAAGCCGAAAAAGGCGCCCCCTGGAGCCA--CAGT--CTTGTTGGTCAT  1091

seq1  GGGTACTGGGGATTTTGGGGTCTT-CCAGAAGAGCAGCCAGTACT  1141
      ||||||  | ||||    |||||| ||| |||| |  ||||||||
seq2  GGGTACCTGTGATT---AGGTCTTCCCAAAAGA-CGACCAGTACT  1132