BAC Information

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BAC

Clone NameB6Ng01-098H16
Chromosome7 (Build37)
Map Location 49,334,606 - 49,335,321
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668555, EG627987, LOC100039269, LOC545955, EG628304, LOC668561, EG434172, LOC100039221, LOC668565, AI987944, EG269902, LOC100039375, EG628359, 2610021A01Rik, 2810426N06Rik, LOC668576, Gprc2a-rs5, LOC628372, EG668579, EG628403, EG628422, Gprc2a-rs1, EG628444, EG434174, EG637913
Downstream geneEG434175, LOC100039556, EG637898, Gprc2a-rs2, LOC434177, Vmn2r-ps60, 4933421I07Rik, LOC628503, BC063263, LOC100039449, EG637776, C330019L16Rik, EG434179, EG546965, LOC546964, LOC100039706, EG637572, LOC100039507, EG435975, LOC668606, EG668668, LOC100039543, LOC668612
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098H16.bB6Ng01-098H16.g
ACCDH908561DH908562
length9801,202
definitionDH908561|Mus musculus domesticus DNA, BAC clone: B6Ng01-098H16, 5' end.DH908562|Mus musculus domesticus DNA, BAC clone: B6Ng01-098H16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtgaaaataattcttgtacagagtaaattaatccagggatcta
gatgatgaaaattaaggtattatattaaataggaagagaaaaaggtaaat
caaacatatataacatctaactcattaattagattgtatatttagacaca
gaatatttttattaaatatcactttgaaataattttatttcactttttct
tccaatatttattattttatttgagattcctctattgagaattctctggc
tttgtttcccatttttaattggggcttatttcacttgatgtatctaactt
cttgagttctttgtaaattttgaatattagacctctgttgaatgtacagt
tagtgaagatcttttcccattctctgggttgctgttttatcctattgatg
atatccttagcctggtaaaagctttttcattacatgaggtcaaatttatt
aatttattaattgttgattaattgttgatctgttcaggaggttggctctt
gtgccaatgagttcaaggcagttcaatttatcatctattatatttagtgt
gtcaggaattatgttgagttatttaatccatttggacttgagttacgtgc
agggtgataaatatggctttatttacattcttctctatccacacatccag
ttagaccagagctgaagatgtgtccttttttccattgtatagctttggct
actttgtcaaacatcaagtgtccataggagggaaggttgatttttttggt
gattttttttctttttctttattagatattttctttatttacatttcaaa
tgttatctcttttcctattttcccctccaaaaatcccctatcctctcccc
tcttcccctgcccccaaccttcccacttgaagtgtccaaaatttggtctt
ccttcttgagtttcacatggtttgcaaatgtatcttggtgctgtaaactt
ctggcctatatccactatcactgagtgcat
gaattctcctagatcttcaaaaaagatttaattccaatacctctcaaatt
attccataagaagcaacaaaaggaatatctgtcaactcatttgataaagt
gactgatactcaagtcaaagactcaaaaaaaaaagaattacagactaatt
tttcttatgtacatgtttgcaaaaatactttaaatatctttgaaattgaa
tgtaaaaacacatcaaacaaacatggtgaatcatctcagtgattcagtga
tggcaatatatagaaataagtaaatgcaaacatgcaaatataaatgaatt
aaaataaacaaatgagcatataatttgatataatataggtctttgacaaa
atccaatgtaacttcattacaaaaatgctgaagactttaagggcacaaag
gccatacttaattacaaggaaggcaatttacagcaagcatatatgcaaca
acaaattaaatgcagagaaacacaaagtaattctactaaaataaggaaca
agtccaatttgtgtattctctacatatctactcagtatagtagtttaaat
tttatacatttattttttattggctattgatttcatttacatttccaatg
ctatcccaaccccacatgctctcccacccactccaccacctacctactcc
cacttcttggccctggcattcccctgtactgaggcatataaagtttgcat
gaccaatgggcctttctttccactgatggccgactaggccatcttctgat
tcatatgcagctagagacacgagctctgggggagtaggggtactggttag
ttcatattgttgttctacctataggattgcagatccctttagttccttgg
gtactttctctagctcctccattgggggccctgtgatccatcccatagct
gactgtgagcatccacttctgtgtttgcatagtctcacagagacactata
tctgggtcctttcagcaaaatcttgctatgtatgcaatggtgtcagtgtt
tgggaagtgattatgggatggatcccggatatgcagtctctagatggtcc
attgaattacagcagtaaacaagttaagaaatcaagggatccatctggaa
gagctaatactattattgcatgatattagttaacttactcaccataaact
tctctcagaatctccatctctgaaccactctggagacacaggtgtgtgtg
at
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_49334606_49335321
seq2: B6Ng01-098H16.b_43_758

seq1  GAATTCAGTGAAAATAATTCTTGTACAGAGTAAATTAATCCAGGGATCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGAAAATAATTCTTGTACAGAGTAAATTAATCCAGGGATCTA  50

seq1  GATGATGAAAATTAAGGTATTATATTAAATAGGAAGAGAAAAAGGTAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATGAAAATTAAGGTATTATATTAAATAGGAAGAGAAAAAGGTAAAT  100

seq1  CAAACATATATAACATCTAACTCATTAATTAGATTGTATATTTAGACACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACATATATAACATCTAACTCATTAATTAGATTGTATATTTAGACACA  150

seq1  GAATATTTTTATTAAATATCACTTTGAAATAATTTTATTTCACTTTTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATTTTTATTAAATATCACTTTGAAATAATTTTATTTCACTTTTTCT  200

seq1  TCCAATATTTATTATTTTATTTGAGATTCCTCTATTGAGAATTCTCTGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATATTTATTATTTTATTTGAGATTCCTCTATTGAGAATTCTCTGGC  250

seq1  TTTGTTTCCCATTTTTAATTGGGGCTTATTTCACTTGATGTATCTAACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTCCCATTTTTAATTGGGGCTTATTTCACTTGATGTATCTAACTT  300

seq1  CTTGAGTTCTTTGTAAATTTTGAATATTAGACCTCTGTTGAATGTACAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGTTCTTTGTAAATTTTGAATATTAGACCTCTGTTGAATGTACAGT  350

seq1  TAGTGAAGATCTTTTCCCATTCTCTGGGTTGCTGTTTTATCCTATTGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGAAGATCTTTTCCCATTCTCTGGGTTGCTGTTTTATCCTATTGATG  400

seq1  ATATCCTTAGCCTGGTAAAAGCTTTTTCATTACATGAGGTCAAATTTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCTTAGCCTGGTAAAAGCTTTTTCATTACATGAGGTCAAATTTATT  450

seq1  AATTTATTAATTGTTGATTAATTGTTGATCTGTTCAGGAGGTTGGCTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATTAATTGTTGATTAATTGTTGATCTGTTCAGGAGGTTGGCTCTT  500

seq1  GTGCCAATGAGTTCAAGGCAGTTCAATTTATCATCTATTATATTTAGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCAATGAGTTCAAGGCAGTTCAATTTATCATCTATTATATTTAGTGT  550

seq1  GTCAGGAATTATGTTGAGTTATTTAATCCATTTGGACTTGAGTTACGTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGAATTATGTTGAGTTATTTAATCCATTTGGACTTGAGTTACGTGC  600

seq1  AGGGTGATAAATATGGCTTTATTTACATTCTTCTCTATCCACACATCCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGATAAATATGGCTTTATTTACATTCTTCTCTATCCACACATCCAG  650

seq1  TTAGACCAGAGCTGAAGATGTGTCCTTTTTTCCATTGTATAGCTTTGGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACCAGAGCTGAAGATGTGTCCTTTTTTCCATTGTATAGCTTTGGCT  700

seq1  ACTTTGTCAAACATCA  716
      ||||||||||||||||
seq2  ACTTTGTCAAACATCA  716