BAC Information

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BAC

Clone NameB6Ng01-100M01
Chromosome7 (Build37)
Map Location 38,598,547 - 38,725,636
singlet/doubletdoublet
Overlap geneEG627844
Upstream geneLOC100043874, Zfp536, LOC100043453
Downstream geneC80913, Ccne1, 1600014C10Rik, Plekhf1, Pop4, LOC668519, LOC100043464, 1700010N08Rik, EG627975, EG625594, EG627983, EG434171, LOC100043467
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-100M01.bB6Ng01-100M01.g
ACCDH910151DH910152
length633988
definitionDH910151|Mus musculus domesticus DNA, BAC clone: B6Ng01-100M01, 5' end.DH910152|Mus musculus domesticus DNA, BAC clone: B6Ng01-100M01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,598,547 - 38,599,332)(38,724,931 - 38,725,636)
sequence
gaattccactctgtcaaattaaaacgcatttaaaaaaatttttgaagtga
ttttaattggtcttctcttcaggctggagggaaaaaaaaacatcttactt
cacttttaagaacattaattttttgttttgccctgcttgttaaagacgca
cgtgtaaagttagcgtaatcagcgctgtgatttcaggaatcttaatctca
cacagtaaacattgatcaacctgcagaacgtcagagtgcttcttcactgg
ggctgaagcacccatctgcctcacagaggaccgggatactcagacagcca
cagatgaagcaggacgctgcccttctcgggagcaaggagaggtgggagga
tctgccgggggcttgaggacacagagggtgggcttcctcttcccaagcag
cttgggctgagtttggctttctgtatccacactctgtcttcgaactttac
ctatagtaactcatcatgatgctgcctggtcctgaacatgacttagcaca
ggtgctggcctacgtttgctgatcttgtccttaaagagagagagaaaaaa
cagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaa
gaaaggaaggaaggaaggaaggaaggaaggaag
gaattctctgtgcctcccttcctccttctgtcctcttccctgaccatgtc
tgtccttctgcatttgccaaggattgctttgtggcctatcacgtgatcag
tctctgacagccagatggagtaacctatagatagatatctgtccattcag
ttggtctgtggtatattagctccggaatttctttgttgcatttggaagac
tctatcggttgctgttcccattgctgcgataaaatgccccggcagtagca
acctcaggggaataaggtttgctttggctcatagttctagggtagagccc
atcatggcagggactctgtggcagcaggcgcctgaggcagcaggtaacgt
tgcatccctggtcagggaacagagggagagaaatgtttgtgcttaagtag
ctttctaccttttcatatagtccagggccccaagcctagggaatggtgct
gccttgtttgaggctgggccttcataccccattaacccagatgatccctc
aaaggtacgcctggaggcttgtctcctgggtgatcctcaagcctgcctgt
cagatcgatgagagtaactgtcacaaagtcctctctaattccaagagtga
gatgttgaagcctctcactcctcttctgtcaggaactatggctgttcttg
cgtctcagtatttgatggcattgagaatcccggtgcttggtacataaatg
tctatcattgttaatggattgttcctctactaacatgtgacggccttctt
tatcgcttttgacaagctctgtgttaaagtctacattatcagctatacta
ataggctgtgcctacttgtctagagtttccttagggctgatttccacctt
tttcagtttgggggtgtcttcccagttagttttggagtttgctcatctgc
tgtgttggatgtgattagttgtttcctggctcctctctgttcaacctgcc
cctttctttccatagctcttaaggatggaggtggtctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_38598547_38599332
seq2: B6Ng01-100M01.b_43_675

seq1  GAATTCCACTCTGTCAAATTAAAACGCATTTAAAAAAATTTTTGAAGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTCTGTCAAATTAAAACGCATTTAAAAAAATTTTTGAAGTGA  50

seq1  TTTTAATTGGTCTTCTCTTCAGGCTGGAGGGAAAAAAAAACATCTTACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATTGGTCTTCTCTTCAGGCTGGAGGGAAAAAAAAACATCTTACTT  100

seq1  CACTTTTAAGAACATTAATTTTTTGTTTTGCCCTGCTTGTTAAAGACGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTTAAGAACATTAATTTTTTGTTTTGCCCTGCTTGTTAAAGACGCA  150

seq1  CGTGTAAAGTTAGCGTAATCAGCGCTGTGATTTCAGGAATCTTAATCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTAAAGTTAGCGTAATCAGCGCTGTGATTTCAGGAATCTTAATCTCA  200

seq1  CACAGTAAACATTGATCAACCTGCAGAACGTCAGAGTGCTTCTTCACTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTAAACATTGATCAACCTGCAGAACGTCAGAGTGCTTCTTCACTGG  250

seq1  GGCTGAAGCACCCATCTGCCTCACAGAGGACCGGGATACTCAGACAGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAAGCACCCATCTGCCTCACAGAGGACCGGGATACTCAGACAGCCA  300

seq1  CAGATGAAGCAGGACGCTGCCCTTCTCGGGAGCAAGGAGAGGTGGGAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGAAGCAGGACGCTGCCCTTCTCGGGAGCAAGGAGAGGTGGGAGGA  350

seq1  TCTGCCGGGGGCTTGAGGACACAGAGGGTGGGCTTCCTCTTCCCAAGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCGGGGGCTTGAGGACACAGAGGGTGGGCTTCCTCTTCCCAAGCAG  400

seq1  CTTGGGCTGAGTTTGGCTTTCTGTATCCACACTCTGTCTTCGAACTTTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGCTGAGTTTGGCTTTCTGTATCCACACTCTGTCTTCGAACTTTAC  450

seq1  CTATAGTAACTCATCATGATGCTGCCTGGTCCTGAACATGACTTAGCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGTAACTCATCATGATGCTGCCTGGTCCTGAACATGACTTAGCACA  500

seq1  GGTGCTGGCCTACGTTTGCTGATCTTGTCCTTAAAGAGAGAGAGAAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTGGCCTACGTTTGCTGATCTTGTCCTTAAAGAGAGAGAGAAAAAA  550

seq1  CAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA  600

seq1  GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG  650
      | |||||||||||||||||||||||||||||||                 
seq2  GAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAG-----------------  633

seq1  AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAAGAA  700
                                                        
seq2  --------------------------------------------------  633

seq1  AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG  750
                                                        
seq2  --------------------------------------------------  633

seq1  AAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAG  786
                                          
seq2  ------------------------------------  633

seq1: chr7_38724931_38725636
seq2: B6Ng01-100M01.g_68_773 (reverse)

seq1  GATAGACATTTATGTACCAAGCACCGGGATTCTCAATGCCATCAAATACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGACATTTATGTACCAAGCACCGGGATTCTCAATGCCATCAAATACT  50

seq1  GAGACGCAAGAACAGCCATAGTTCCTGACAGAAGAGGAGTGAGAGGCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACGCAAGAACAGCCATAGTTCCTGACAGAAGAGGAGTGAGAGGCTTC  100

seq1  AACATCTCACTCTTGGAATTAGAGAGGACTTTGTGACAGTTACTCTCATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCTCACTCTTGGAATTAGAGAGGACTTTGTGACAGTTACTCTCATC  150

seq1  GATCTGACAGGCAGGCTTGAGGATCACCCAGGAGACAAGCCTCCAGGCGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGACAGGCAGGCTTGAGGATCACCCAGGAGACAAGCCTCCAGGCGT  200

seq1  ACCTTTGAGGGATCATCTGGGTTAATGGGGTATGAAGGCCCAGCCTCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTGAGGGATCATCTGGGTTAATGGGGTATGAAGGCCCAGCCTCAAA  250

seq1  CAAGGCAGCACCATTCCCTAGGCTTGGGGCCCTGGACTATATGAAAAGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCAGCACCATTCCCTAGGCTTGGGGCCCTGGACTATATGAAAAGGT  300

seq1  AGAAAGCTACTTAAGCACAAACATTTCTCTCCCTCTGTTCCCTGACCAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGCTACTTAAGCACAAACATTTCTCTCCCTCTGTTCCCTGACCAGG  350

seq1  GATGCAACGTTACCTGCTGCCTCAGGCGCCTGCTGCCACAGAGTCCCTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCAACGTTACCTGCTGCCTCAGGCGCCTGCTGCCACAGAGTCCCTGC  400

seq1  CATGATGGGCTCTACCCTAGAACTATGAGCCAAAGCAAACCTTATTCCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATGGGCTCTACCCTAGAACTATGAGCCAAAGCAAACCTTATTCCCC  450

seq1  TGAGGTTGCTACTGCCGGGGCATTTTATCGCAGCAATGGGAACAGCAACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTTGCTACTGCCGGGGCATTTTATCGCAGCAATGGGAACAGCAACC  500

seq1  GATAGAGTCTTCCAAATGCAACAAAGAAATTCCGGAGCTAATATACCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGAGTCTTCCAAATGCAACAAAGAAATTCCGGAGCTAATATACCACA  550

seq1  GACCAACTGAATGGACAGATATCTATCTATAGGTTACTCCATCTGGCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAACTGAATGGACAGATATCTATCTATAGGTTACTCCATCTGGCTGT  600

seq1  CAGAGACTGATCACGTGATAGGCCACAAAGCAATCCTTGGCAAATGCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGACTGATCACGTGATAGGCCACAAAGCAATCCTTGGCAAATGCAGA  650

seq1  AGGACAGACATGGTCAGGGAAGAGGACAGAAGGAGGAAGGGAGGCACAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAGACATGGTCAGGGAAGAGGACAGAAGGAGGAAGGGAGGCACAGA  700

seq1  GAATTC  706
      ||||||
seq2  GAATTC  706