BAC Information

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BAC

Clone NameB6Ng01-100P18
Chromosome7 (Build37)
Map Location 80,148,749 - 80,306,252
singlet/doubletdoublet
Overlap geneLOC625243
Upstream geneMctp2, LOC100042873, LOC100042880, LOC233391, LOC665570, LOC100042029, EG384643
Downstream gene4930429H19Rik, LOC665588, Rgma, Chd2, 1810026B05Rik, EG665610, LOC244061, A830073O21Rik, St8sia2, LOC100042127, LOC100042140
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-100P18.bB6Ng01-100P18.g
ACCDH910313DH910314
length8231,016
definitionDH910313|Mus musculus domesticus DNA, BAC clone: B6Ng01-100P18, 5' end.DH910314|Mus musculus domesticus DNA, BAC clone: B6Ng01-100P18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(80,305,430 - 80,306,252)(80,148,749 - 80,149,764)
sequence
gaattctcaagacagcaaactaagtctcactctacctgtaagtctgacat
ttgcctgtcaccagagaatgtccacgttcgcgcaggatgcttctccaact
taggtcccctctttattcattcccacgagtgattgacctgcaggtctgtg
tgtgtgccgcctgcatgcctggtccccacagagaccagaagagggagctg
cgtttcctggagctggagctatgggtgattgggagctaccctgtgagtcc
tgggaactgaagctgggtcctcggcaagagcagctcttgtatctgtgtag
tccacaggagtgcaggagtccgtggaaatcagaaaagggtgtgagagtcc
ctggaactggagtttcaggtggttgtgaatcttcctgtgggaactgaatc
caggccctctgcaagagcagtaattgcttttgatagccggcaagtcatct
ctcagccccagttttacagcgctgcctcagaaactacacttgggggctgg
agtgatggctttagtgactaagagcactggctgcttttccaggggacctg
agttcaatccccaggacccacatggtggtccacaaccgtctgtaactcct
ccaagaggatctgattccctcttgtgatctttgtggaggtcatagataca
ggccaaacatccatacacacagaataataaaataatttttaaaaaaagat
gggaaaatccacatttgcctctagtgccacttaggcagtattttccttcc
ttccttccttccttccttccatccgtccttctatccttcctctctctctc
tctctctctctctctctctctct
gaattcttttacttgttgtattgttcttttagattttgccacactgattt
acctatcaatatttcgtgctttgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgttaactttggagttgactgattgggctagctcgcccattctgctttg
agtggagatatcattacttcttgcttggggttactacaagtaaccgcttt
aaatgttcttgcccagttctttcatttgatgtaactcttaggcaggatgg
agaaaacagcagccataaaagcaaaggagaaagaaggctgtggctcatta
aacagtgtgctctgtgagaggtgaagcaaggagaatgacaagcatggaag
agagtgtttgcgggtaccatgtactttagttaaactattgagcgcatgtc
tttatttctcctaagaaaaatacctaggttactgcatagatatatattaa
acttaataaaaataatgaagaagcattatgaagtgtggtttactccattt
taaactcctaccaggagttcactagaggtccaggaagccatacccctgcc
cccactggatgttggcagccattttggtttgagcctccttacagtagtat
agtggcaattcacagggcttttgattacattttttatgactactgatgtt
aaataattgtttatgctttaaatggacatttttgtaaagtgcatattgaa
gtatctcatttcattctacattatttttcatgcttacattttgcacgttc
ggatgcaaaacattgataatgaacactggaataacatagatgttctggag
gcatcttttcagattttaaagcacgaaagtgttggaaaacaacatttaaa
catttgggccttgtaaagctcaaggttttagcttattgaattgtggaaag
tctttatatttgtgatcaagttcctttctccttccttcttccacttatca
cttcatgtcttatcaaagagtgcaaatctaagtttaatgaaattgacctt
cttttccttccttctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_80305430_80306252
seq2: B6Ng01-100P18.b_49_871 (reverse)

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAAGGAAGGAAGGAAG  50
      ||||||||||||||||||||||||||||||||||||||||  |||||| |
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAAGGATAGAAGGACG  50

seq1  GAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAATACTGCCTAAGTGGCAC  100
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAAGGAAGGAAGGAAGGAAGGAAGGAAAATACTGCCTAAGTGGCAC  100

seq1  TAGAGGCAAATGTGGATTTTCCCATCTTTTTTTAAAAATTATTTTATTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGCAAATGTGGATTTTCCCATCTTTTTTTAAAAATTATTTTATTAT  150

seq1  TCTGTGTGTATGGATGTTTGGCCTGTATCTATGACCTCCACAAAGATCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTGTATGGATGTTTGGCCTGTATCTATGACCTCCACAAAGATCAC  200

seq1  AAGAGGGAATCAGATCCTCTTGGAGGAGTTACAGACGGTTGTGGACCACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGGAATCAGATCCTCTTGGAGGAGTTACAGACGGTTGTGGACCACC  250

seq1  ATGTGGGTCCTGGGGATTGAACTCAGGTCCCCTGGAAAAGCAGCCAGTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGGTCCTGGGGATTGAACTCAGGTCCCCTGGAAAAGCAGCCAGTGC  300

seq1  TCTTAGTCACTAAAGCCATCACTCCAGCCCCCAAGTGTAGTTTCTGAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGTCACTAAAGCCATCACTCCAGCCCCCAAGTGTAGTTTCTGAGGC  350

seq1  AGCGCTGTAAAACTGGGGCTGAGAGATGACTTGCCGGCTATCAAAAGCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGCTGTAAAACTGGGGCTGAGAGATGACTTGCCGGCTATCAAAAGCAA  400

seq1  TTACTGCTCTTGCAGAGGGCCTGGATTCAGTTCCCACAGGAAGATTCACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGCTCTTGCAGAGGGCCTGGATTCAGTTCCCACAGGAAGATTCACA  450

seq1  ACCACCTGAAACTCCAGTTCCAGGGACTCTCACACCCTTTTCTGATTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCTGAAACTCCAGTTCCAGGGACTCTCACACCCTTTTCTGATTTCC  500

seq1  ACGGACTCCTGCACTCCTGTGGACTACACAGATACAAGAGCTGCTCTTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGACTCCTGCACTCCTGTGGACTACACAGATACAAGAGCTGCTCTTGC  550

seq1  CGAGGACCCAGCTTCAGTTCCCAGGACTCACAGGGTAGCTCCCAATCACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGGACCCAGCTTCAGTTCCCAGGACTCACAGGGTAGCTCCCAATCACC  600

seq1  CATAGCTCCAGCTCCAGGAAACGCAGCTCCCTCTTCTGGTCTCTGTGGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCTCCAGCTCCAGGAAACGCAGCTCCCTCTTCTGGTCTCTGTGGGG  650

seq1  ACCAGGCATGCAGGCGGCACACACACAGACCTGCAGGTCAATCACTCGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGCATGCAGGCGGCACACACACAGACCTGCAGGTCAATCACTCGTG  700

seq1  GGAATGAATAAAGAGGGGACCTAAGTTGGAGAAGCATCCTGCGCGAACGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGAATAAAGAGGGGACCTAAGTTGGAGAAGCATCCTGCGCGAACGT  750

seq1  GGACATTCTCTGGTGACAGGCAAATGTCAGACTTACAGGTAGAGTGAGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATTCTCTGGTGACAGGCAAATGTCAGACTTACAGGTAGAGTGAGAC  800

seq1  TTAGTTTGCTGTCTTGAGAATTC  823
      |||||||||||||||||||||||
seq2  TTAGTTTGCTGTCTTGAGAATTC  823

seq1: chr7_80148749_80149764
seq2: B6Ng01-100P18.g_67_1082

seq1  GAATTCTTTTACTTGTTGTATTGTTCTTTTAGATTTTGCCACACTGATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTACTTGTTGTATTGTTCTTTTAGATTTTGCCACACTGATTT  50

seq1  ACCTATCAATATTTCGTGCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTATCAATATTTCGTGCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  100

seq1  GTGTTAACTTTGGAGTTGACTGATTGGGCTAGCTCGCCCATTCTGCTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTAACTTTGGAGTTGACTGATTGGGCTAGCTCGCCCATTCTGCTTTG  150

seq1  AGTGGAGATATCATTACTTCTTGCTTGGGGTTACTACAAGTAACCGCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAGATATCATTACTTCTTGCTTGGGGTTACTACAAGTAACCGCTTT  200

seq1  AAATGTTCTTGCCCAGTTCTTTCATTTGATGTAACTCTTAGGCAGGATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTCTTGCCCAGTTCTTTCATTTGATGTAACTCTTAGGCAGGATGG  250

seq1  AGAAAACAGCAGCCATAAAAGCAAAGGAGAAAGAAGGCTGTGGCTCATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACAGCAGCCATAAAAGCAAAGGAGAAAGAAGGCTGTGGCTCATTA  300

seq1  AACAGTGTGCTCTGTGAGAGGTGAAGCAAGGAGAATGACAAGCATGGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTGTGCTCTGTGAGAGGTGAAGCAAGGAGAATGACAAGCATGGAAG  350

seq1  AGAGTGTTTGCGGGTACCATGTACTTTAGTTAAACTATTGAGCGCATGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGTTTGCGGGTACCATGTACTTTAGTTAAACTATTGAGCGCATGTC  400

seq1  TTTATTTCTCCTAAGAAAAATACCTAGGTTACTGCATAGATATATATTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTCTCCTAAGAAAAATACCTAGGTTACTGCATAGATATATATTAA  450

seq1  ACTTAATAAAAATAATGAAGAAGCATTATGAAGTGTGGTTTACTCCATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAATAAAAATAATGAAGAAGCATTATGAAGTGTGGTTTACTCCATTT  500

seq1  TAAACTCCTACCAGGAGTTCACTAGAGGTCCAGGAAGCCATACCCCTGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTCCTACCAGGAGTTCACTAGAGGTCCAGGAAGCCATACCCCTGCC  550

seq1  CCCACTGGATGTTGGCAGCCATTTTGGTTTGAGCCTCCTTACAGTAGTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTGGATGTTGGCAGCCATTTTGGTTTGAGCCTCCTTACAGTAGTAT  600

seq1  AGTGGCAATTCACAGGGCTTTTGATTACATTTTTTATGACTACTGATGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCAATTCACAGGGCTTTTGATTACATTTTTTATGACTACTGATGTT  650

seq1  AAATAATTGTTTATGCTTTAAATGGACATTTTTGTAAAGTGCATATTGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATTGTTTATGCTTTAAATGGACATTTTTGTAAAGTGCATATTGAA  700

seq1  GTATCTCA-TTCATTCTACATTA-TTTTCATGCTTACATTTTGCACGTTC  748
      |||||||| |||||||||||||| ||||||||||||||||||||||||||
seq2  GTATCTCATTTCATTCTACATTATTTTTCATGCTTACATTTTGCACGTTC  750

seq1  GGATGCAAAACATTGATAATGAACACTGGGAATAACATAGATGTTCTGGA  798
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GGATGCAAAACATTGATAATGAACACT-GGAATAACATAGATGTTCTGGA  799

seq1  GGCATC-TTTCAGATTTTAAAGCACGAAAGTGTTGGGAAAACAACA-TTA  846
      |||||| ||||||||||||||||||||||||||| ||||||||||| |||
seq2  GGCATCTTTTCAGATTTTAAAGCACGAAAGTGTT-GGAAAACAACATTTA  848

seq1  AACATTTGGGCCTTGTAAAGCTCAAGGTTTTAGCTTATTGAATTGTGGAA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTGGGCCTTGTAAAGCTCAAGGTTTTAGCTTATTGAATTGTGGAA  898

seq1  AGTCTTTATATTGTGGATCAAGTTCCCTTTCTCCTTCCTTCCTTCACTTA  946
      ||||||||||||   ||||||||| |||||||||||||||| | ||||||
seq2  AGTCTTTATATTTGTGATCAAGTT-CCTTTCTCCTTCCTTCTTCCACTTA  947

seq1  GTCACTTCATGTC-TATCAAAGAGTGCAAATCTTAGTTTTAATGAAATTT  995
       |||||||||||| ||||||||||||||||||| || |||||||||| ||
seq2  -TCACTTCATGTCTTATCAAAGAGTGCAAATCTAAG-TTTAATGAAA-TT  994

seq1  GACCTTCTTTTCCTT-CTTCTT  1016
      ||||||||||||||| ||||||
seq2  GACCTTCTTTTCCTTCCTTCTT  1016