BAC Information

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BAC

Clone NameB6Ng01-104G22
Chromosome7 (Build37)
Map Location 74,018,488 - 74,155,284
singlet/doubletdoublet
Overlap geneAdamts17
Upstream genePcsk6, Snrpa1, H47, Chsy1, Lrrk1, Aldh1a3, Asb7, Lins2, Lass3
Downstream geneLysmd4, Mef2a, EG665304, Lrrc28, Ttc23, Dmn, LOC665319, LOC100041771, Igf1r
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-104G22.bB6Ng01-104G22.g
ACCDH912735DH912736
length924738
definitionDH912735|Mus musculus domesticus DNA, BAC clone: B6Ng01-104G22, 5' end.DH912736|Mus musculus domesticus DNA, BAC clone: B6Ng01-104G22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,018,488 - 74,019,205)(74,154,547 - 74,155,284)
sequence
gaattccaactgctcagtaataaaaagacattttcagttcttacaagcca
gcaaagaaagggctggagaggtaacccagtcaatatggcgttcatctccc
aagctcaaggacaccagttccctcctcagaacctatgcattaatttttaa
aaagctgaatattgtggcacaagcttgtaatcccagtggcaagtttgtct
gtagtaaagtgcaggcatgtacacacacacacacacacacacacacacac
acgagcaaagagctcaaatgactctacaaaggataaaatacagacagtca
atcaatatataagatgctgagcactaagggccaccagggaaatttaaatc
aaaatcacccggagacacttcgcaactactcatagaacaactaggttata
attaaaaaaagaaggccactaatgagtgttgacagggttcagagaatgaa
agccttcatatgctgctgctaggaatctgaaatagcataaccatcttaga
gaaagtgtggaagtttattaaaagttttgaaattgtgatagaacccagcc
accccatttctaacccatttctaattcaagtcctccgggagacttgaaaa
cgtgcattataaaaatttacacatcaattctgagtggtattgttcatgga
ggaaaaaaagggaacaaatcaaatgcctatctacatgtaaaatggtagct
agagtaagtatatttgtggctgggacctttacttggccattaaagaaaaa
ggaaaccatccatggatgggatatgtgctccatatccaggcaagctttgc
agtcggtctgtgagtaaagaagccagccagaacacacgacatactttacg
tgaattgctaggaatcagaaaaagttgttcagactgaatggatatttaat
gatttgtttagggtaaaagtggag
gaattcacgccgtcctgccagccctcagaggggaaacttgtttctcagaa
ggcagagcagagacaggaagaaggctcacaggtagtgaagatgccagtat
ttgtctcaaaatgcactctacctagttttgttcactccttgttttaagtt
ctgtattccaaaaccagaaagcactccaccctgcagccaccgtgtctagg
ttttattccctgggacatatccaacccctcttccagttcgttagttttag
tggtaggcttaaagttctagaaatgttggagacaaaagacagacagacac
aatacacacacttgtctcattagtgttcaggtgctttccaaactttccat
gatagctcttcacaggaacctcggccccatggctggctgcgaacttccct
gaggttcctgtcttccagggaactcagggcctgggaattcagacagcatt
ctcaattcccacactggaatgcggcttttaagagagaggttcctccagaa
ttttgaagttgtaatttctacatgatattctctctcctaaaatgcctgtc
tatgagtgttttcttatgttttatgacatctagtaagtaagtaagtagaa
tttttttttcctattaaacgggaccaaagtggtttggagaatgttgagta
tttcacagcagcatgcttttaaaaatcttaaagtaagctctctctctctc
tctctctctctctctctctttctctctctctctccctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_74018488_74019205
seq2: B6Ng01-104G22.b_35_754

seq1  GAATTCCAACTGCTCAGTAATAAAAAGACA-GTTCAGTTCTTACAAGCCA  49
      ||||||||||||||||||||||||||||||  ||||||||||||||||||
seq2  GAATTCCAACTGCTCAGTAATAAAAAGACATTTTCAGTTCTTACAAGCCA  50

seq1  GCAAAGAAAGGGCTGGAGAGGTAACCCAGTCAATATGGCGTTCATCTCCC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGAAAGGGCTGGAGAGGTAACCCAGTCAATATGGCGTTCATCTCCC  100

seq1  AAGCTCAAGGACACCAGTTCCCTCCTCAGAACCTATGCATTAATTTTTAA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCAAGGACACCAGTTCCCTCCTCAGAACCTATGCATTAATTTTTAA  150

seq1  AAAGCTGAATATTGTGGCACAAGCTTGTAATCCCAGTGGCAAGTTTGTCT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTGAATATTGTGGCACAAGCTTGTAATCCCAGTGGCAAGTTTGTCT  200

seq1  GTAGTAAAGTGCAGGCATGTACACACACACACACACACACACACACACAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTAAAGTGCAGGCATGTACACACACACACACACACACACACACACAC  250

seq1  ACGAGCAAAGAGCTCAAATGACTCTACAAAGGATAAAATACAGACAGTCA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAGCAAAGAGCTCAAATGACTCTACAAAGGATAAAATACAGACAGTCA  300

seq1  ATCAATATATAAGATGCTGAGCACTAAGGGCCACCAGGGAAATTTAAATC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATATATAAGATGCTGAGCACTAAGGGCCACCAGGGAAATTTAAATC  350

seq1  AAAATCACCCGGAGACACTTCGCAACTACTCATAGAACAACTAGGTTATA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCACCCGGAGACACTTCGCAACTACTCATAGAACAACTAGGTTATA  400

seq1  ATTAAAAAAAGAAGGCCACTAATGAGTGTTGACAGGGTTCAGAGAATGAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAAAAAGAAGGCCACTAATGAGTGTTGACAGGGTTCAGAGAATGAA  450

seq1  AGCCTTCATATGCTGCTGCTAGGAATCTGAAATAGCATAACCATCTTAGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTCATATGCTGCTGCTAGGAATCTGAAATAGCATAACCATCTTAGA  500

seq1  GAAAGTGTGGAAGTTTATTAAAAGTTTTGAAATTGTGATAGAACCCAGCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTGTGGAAGTTTATTAAAAGTTTTGAAATTGTGATAGAACCCAGCC  550

seq1  ACCCCATTTCTAACCCATTTCTAATTCAAGTCCTCCGGGAGACTTGAAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCATTTCTAACCCATTTCTAATTCAAGTCCTCCGGGAGACTTGAAAA  600

seq1  CGTGCATTATAAAAATTTACACATCAATTCTGAGTGGTATTGTTCATGGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGCATTATAAAAATTTACACATCAATTCTGAGTGGTATTGTTCATGGA  650

seq1  GGAAAAAAAGGGAACAAATCAAATGCCTATCTACATGT-AAATGGTAGCT  698
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GGAAAAAAAGGGAACAAATCAAATGCCTATCTACATGTAAAATGGTAGCT  700

seq1  AGAGTAAGTATATTTGTGGC  718
      ||||||||||||||||||||
seq2  AGAGTAAGTATATTTGTGGC  720

seq1: chr7_74154547_74155284
seq2: B6Ng01-104G22.g_68_805 (reverse)

seq1  GAGGGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  50

seq1  GCTTACTTTAAGATTTTTAAAAGCATGCTGCTGTGAAATACTCAACATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTACTTTAAGATTTTTAAAAGCATGCTGCTGTGAAATACTCAACATTC  100

seq1  TCCAAACCACTTTGGTCCCGTTTAATAGGAAAAAAAAATTCTACTTACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAACCACTTTGGTCCCGTTTAATAGGAAAAAAAAATTCTACTTACTT  150

seq1  ACTTACTAGATGTCATAAAACATAAGAAAACACTCATAGACAGGCATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACTAGATGTCATAAAACATAAGAAAACACTCATAGACAGGCATTTT  200

seq1  AGGAGAGAGAATATCATGTAGAAATTACAACTTCAAAATTCTGGAGGAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGAGAATATCATGTAGAAATTACAACTTCAAAATTCTGGAGGAAC  250

seq1  CTCTCTCTTAAAAGCCGCATTCCAGTGTGGGAATTGAGAATGCTGTCTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTTAAAAGCCGCATTCCAGTGTGGGAATTGAGAATGCTGTCTGA  300

seq1  ATTCCCAGGCCCTGAGTTCCCTGGAAGACAGGAACCTCAGGGAAGTTCGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCAGGCCCTGAGTTCCCTGGAAGACAGGAACCTCAGGGAAGTTCGC  350

seq1  AGCCAGCCATGGGGCCGAGGTTCCTGTGAAGAGCTATCATGGAAAGTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGCCATGGGGCCGAGGTTCCTGTGAAGAGCTATCATGGAAAGTTTG  400

seq1  GAAAGCACCTGAACACTAATGAGACAAGTGTGTGTATTGTGTCTGTCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCACCTGAACACTAATGAGACAAGTGTGTGTATTGTGTCTGTCTGT  450

seq1  CTTTTGTCTCCAACATTTCTAGAACTTTAAGCCTACCACTAAAACTAACG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGTCTCCAACATTTCTAGAACTTTAAGCCTACCACTAAAACTAACG  500

seq1  AACTGGAAGAGGGGTTGGATATGTCCCAGGGAATAAAACCTAGACACGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGAAGAGGGGTTGGATATGTCCCAGGGAATAAAACCTAGACACGGT  550

seq1  GGCTGCAGGGTGGAGTGCTTTCTGGTTTTGGAATACAGAACTTAAAACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCAGGGTGGAGTGCTTTCTGGTTTTGGAATACAGAACTTAAAACAA  600

seq1  GGAGTGAACAAAACTAGGTAGAGTGCATTTTGAGACAAATACTGGCATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGAACAAAACTAGGTAGAGTGCATTTTGAGACAAATACTGGCATCT  650

seq1  TCACTACCTGTGAGCCTTCTTCCTGTCTCTGCTCTGCCTTCTGAGAAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTACCTGTGAGCCTTCTTCCTGTCTCTGCTCTGCCTTCTGAGAAACA  700

seq1  AGTTTCCCCTCTGAGGGCTGGCAGGACGGCGTGAATTC  738
      ||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCCCCTCTGAGGGCTGGCAGGACGGCGTGAATTC  738