BAC Information

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BAC

Clone NameB6Ng01-105B05
Chromosome7 (Build37)
Map Location 7,496,705 - 7,624,527
singlet/doubletdoublet
Overlap geneVmn2r33, LOC665470, EG665474, EG628368, LOC100042636
Upstream geneOlfr1350, Zim2, Zim1, Peg3, Usp29, LOC627961, Aurkc, LOC628030, LOC100041822, 5730403M16Rik, 2810409K11Rik, Vmn2r-ps35, Zfp418, BC023179, 6430701C03Rik, Clcn4-2, V2r15, LOC100041866, LOC100042577, Vmn2r31, Vmn2r-ps36, V2r5, LOC100041883, EG628117
Downstream geneLOC665485, EG625353, Vmn2r-ps40, Vmn2r36, LOC638170, LOC100042662, LOC100041942, LOC100042673, LOC100041949, LOC100042681, LOC100042688, LOC100042695, LOC100041956, LOC100041961, LOC100042703, LOC100041967, LOC100042724, LOC100041977
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-105B05.bB6Ng01-105B05.g
ACCDH913194DH913195
length84483
definitionDH913194|Mus musculus domesticus DNA, BAC clone: B6Ng01-105B05, 5' end.DH913195|Mus musculus domesticus DNA, BAC clone: B6Ng01-105B05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,623,684 - 7,624,527)(7,496,705 - 7,496,787)
sequence
gaattctgtcaaatgtaaagttggtacatacccaccaaatattgggttat
agtgcatgtgtctagttttagaatcactctcactggttgctctagtgata
tcagcaagtatcatatctactgaacttccctacagtgtccataaaatctt
gcactcattcactttcttcattttctctcagagaactaaactctctaatt
attacaattttattcttcattttgctttcatggagattgccctctggtaa
cttccaaaaaatgttgataaggaagttgaatccaccactttgtgtagaaa
aatgagatctaggaagacagggttacacataaaaaccatctaccaaaata
aataatcaatgagaaacacagactaactaaataatcagcaaagatgaaat
cagaacatattttctaatttccagtaagagcacacacataagaaaatact
tacttttttcatctgttcttcaatctactgaccaatagtctaaggaggaa
atgttccttttctgctgtcaaataaaaatatattatatccaacaatgttc
agaagcccagggactctctggatgaattgggaatattgggaagaagctga
ggaggagggtgaccagcattctcaacaaacctggacaagcaagatctctc
agacattgagcctctaaccagagatcatacactagctgatgtgaagcccc
caacaaatatgcagcataagactgcctggtctagcatcagtgggagagac
acacctaaccccagagagacttaagtctccagggattgggaagggctggt
cgttggggaggtagggatatcatcttggagatgggggaggagtt
agacctggttgggtttagttgtttgacatttgattgggattgtgtgtgtg
tgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_7623684_7624527
seq2: B6Ng01-105B05.b_47_890 (reverse)

seq1  AACTCCTCCCCCATCTCCAAGATGATATCCCTACCTCCCCAACGACCAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCTCCCCCATCTCCAAGATGATATCCCTACCTCCCCAACGACCAGC  50

seq1  CCTTCCCAATCCCTGGAGACTTAAGTCTCTCTGGGGTTAGGTGTGTCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCCAATCCCTGGAGACTTAAGTCTCTCTGGGGTTAGGTGTGTCTCT  100

seq1  CCCACTGATGCTAGACCAGGCAGTCTTATGCTGCATATTTGTTGGGGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTGATGCTAGACCAGGCAGTCTTATGCTGCATATTTGTTGGGGGCT  150

seq1  TCACATCAGCTAGTGTATGATCTCTGGTTAGAGGCTCAATGTCTGAGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATCAGCTAGTGTATGATCTCTGGTTAGAGGCTCAATGTCTGAGAGA  200

seq1  TCTTGCTTGTCCAGGTTTGTTGAGAATGCTGGTCACCCTCCTCCTCAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCTTGTCCAGGTTTGTTGAGAATGCTGGTCACCCTCCTCCTCAGCT  250

seq1  TCTTCCCAATATTCCCAATTCATCCAGAGAGTCCCTGGGCTTCTGAACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCCAATATTCCCAATTCATCCAGAGAGTCCCTGGGCTTCTGAACAT  300

seq1  TGTTGGATATAATATATTTTTATTTGACAGCAGAAAAGGAACATTTCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGATATAATATATTTTTATTTGACAGCAGAAAAGGAACATTTCCTC  350

seq1  CTTAGACTATTGGTCAGTAGATTGAAGAACAGATGAAAAAAGTAAGTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGACTATTGGTCAGTAGATTGAAGAACAGATGAAAAAAGTAAGTATT  400

seq1  TTCTTATGTGTGTGCTCTTACTGGAAATTAGAAAATATGTTCTGATTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATGTGTGTGCTCTTACTGGAAATTAGAAAATATGTTCTGATTTCA  450

seq1  TCTTTGCTGATTATTTAGTTAGTCTGTGTTTCTCATTGATTATTTATTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGCTGATTATTTAGTTAGTCTGTGTTTCTCATTGATTATTTATTTT  500

seq1  GGTAGATGGTTTTTATGTGTAACCCTGTCTTCCTAGATCTCATTTTTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGATGGTTTTTATGTGTAACCCTGTCTTCCTAGATCTCATTTTTCTA  550

seq1  CACAAAGTGGTGGATTCAACTTCCTTATCAACATTTTTTGGAAGTTACCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAGTGGTGGATTCAACTTCCTTATCAACATTTTTTGGAAGTTACCA  600

seq1  GAGGGCAATCTCCATGAAAGCAAAATGAAGAATAAAATTGTAATAATTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCAATCTCCATGAAAGCAAAATGAAGAATAAAATTGTAATAATTAG  650

seq1  AGAGTTTAGTTCTCTGAGAGAAAATGAAGAAAGTGAATGAGTGCAAGATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTTAGTTCTCTGAGAGAAAATGAAGAAAGTGAATGAGTGCAAGATT  700

seq1  TTATGGACACTGTAGGGAAGTTCAGTAGATATGATACTTGCTGATATCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGACACTGTAGGGAAGTTCAGTAGATATGATACTTGCTGATATCAC  750

seq1  TAGAGCAACCAGTGAGAGTGATTCTAAAACTAGACACATGCACTATAACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGCAACCAGTGAGAGTGATTCTAAAACTAGACACATGCACTATAACC  800

seq1  CAATATTTGGTGGGTATGTACCAACTTTACATTTGACAGAATTC  844
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATTTGGTGGGTATGTACCAACTTTACATTTGACAGAATTC  844

seq1: chr7_7496705_7496787
seq2: B6Ng01-105B05.g_74_156

seq1  AGACCTGGTTGGGTTTAGTTGTTTGACATTTGATTGGGATTGTGTGTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTGGTTGGGTTTAGTTGTTTGACATTTGATTGGGATTGTGTGTGTG  50

seq1  TGTGTGTGTGTGTGTCTGTGTGTGTGTGTGTGT  83
      |||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTCTGTGTGTGTGTGTGTGT  83