BAC Information

Click to search

BAC

Clone NameB6Ng01-105K22
Chromosome7 (Build37)
Map Location 129,160,217 - 129,261,094
singlet/doubletdoublet
Overlap geneGga2, Ears2, Ubfd1, Ndufab1, Palb2
Upstream geneMettl9, LOC668456, Igsf6, Otoa, LOC668556, Hs3st2, Usp31, Scnn1g, Scnn1b, Cog7
Downstream geneDctn5, Plk1, Ern2, 2010110P09Rik, Prkcb1, LOC668486, Cacng3, 4930413G21Rik, Rbbp6, LOC628696, LOC100042977, LOC100042981
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-105K22.bB6Ng01-105K22.g
ACCDH913636DH913637
length672917
definitionDH913636|Mus musculus domesticus DNA, BAC clone: B6Ng01-105K22, 5' end.DH913637|Mus musculus domesticus DNA, BAC clone: B6Ng01-105K22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(129,160,217 - 129,160,887)(129,260,451 - 129,261,094)
sequence
gaattctctgtgtagccctggctgtcctggaactcagtgtagaccaggct
ggcctcaaactcagagatccacctgcctctgcctcttgagtgctgggatg
aaaggcatgcaccacccagctttttggggggcatagctgttgtctttgta
tgtttcggtaacagcttcctcatgctgctttggggaactatcccttctca
aaccaaagtctaaagttcacctaggactcatcactgccctcttccacccc
tctggtctggtaatcttcctatgacatcctcttggtcatccagatctcaa
gaccacagtctaagccatcaggtccacagacagagcagttacttttgaaa
gtcatggtgaaatgagacatttctgcagtgaatgaggcagggagcagagg
cctgagcaaatccaagaaacaaaagctcagtggcaggacggagcagtatg
gggttaggcccgctcccactctgagcctttctttctttctatctgggttt
cagcctctgtaactgacatcttaggcctgaatgtggtaggctatgctatg
cattactggacatttaagttcatcttagcctccacccattagattgccaa
ttatacagccgaccttgccagtcctgacacctcaaggtgcctccagacat
gcccagcttctcaggatgtggg
gaattcaagagaatgtgattagcaggctcaggcctgtaatctcagctcct
cagaaggctgaggcaggaagatcacaggttcagggccaacctacacaact
taatatgaccccatcacaaaataaaaaataaaaagaaagctaggagtaac
ataaaagagtgataaaatttttcctgaaatattcatgaaactataagtga
ctgaatataactttcttttatgtaggttccagtattacaaatagttccag
tgcctgatgtttacaatcttatatgtgtagctttgggaagtttggaaatc
agagaaatcaggtacgcagtttctgagaactccacatgtgcttgccctct
ctctctctctctctctctctctctctctcgctctcgctctcgctctcgct
ctcgctctcactctcgctcttgctctcgctctgacactccaccatctttg
ttcttttcagttattctgagtacacattataactcacacttcagtattaa
aagcagggcatcttaaaagaatctgagtttctggtatgcaaagattattc
ggtgtttaaggctacttgctgcacttaaagaggatctatctgggttgggt
tcccagcacctacaataggtggcacacaattactttcaactccagttcta
gggaatatcacaccctgtgttagttagggatttactgctgtgaacagaca
ccatgagcaaggcaactcttcataaggacaacatttaattgggttcagat
attcagtccattatcatcaaggcaggagcatggcagcatctagacagaca
tggtgctagaggagctgagattctacatcttcatctgaaggctgctagca
gaatactgacttctaagatgagggccctaaagcccacacccacagtgaca
cacttcctccaaccagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_129160217_129160887
seq2: B6Ng01-105K22.b_48_719

seq1  GAATTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCAGTGTAGACCAGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCAGTGTAGACCAGGCT  50

seq1  GGCCTCAAACTCAGAGATCCACCTGCCTCTGCCTCTTGAGTGCTGGGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCAAACTCAGAGATCCACCTGCCTCTGCCTCTTGAGTGCTGGGATG  100

seq1  AAAGGCATGCACCACCCAGCTTTTTGGGGGGCATAGCTGTTGTCTTTGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCATGCACCACCCAGCTTTTTGGGGGGCATAGCTGTTGTCTTTGTA  150

seq1  TGTTTCGGTAACAGCTTCCTCATGCTGCTTTGGGGAACTATCCCTTCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCGGTAACAGCTTCCTCATGCTGCTTTGGGGAACTATCCCTTCTCA  200

seq1  AACCAAAGTCTAAAGTTCACCTAGGACTCATCACTGCCCTCTTCCACCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAAGTCTAAAGTTCACCTAGGACTCATCACTGCCCTCTTCCACCCC  250

seq1  TCTGGTCTGGTAATCTTCCTATGACATCCTCTTGGTCATCCAGATCTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTCTGGTAATCTTCCTATGACATCCTCTTGGTCATCCAGATCTCAA  300

seq1  GACCACAGTCTAAGCCATCAGGTCCACAGACAGAGCAGTTACTTTTGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCACAGTCTAAGCCATCAGGTCCACAGACAGAGCAGTTACTTTTGAAA  350

seq1  GTCATGGTGAAATGAGACATTTCTGCAGTGAATGAGGCAGGGAGCAGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGGTGAAATGAGACATTTCTGCAGTGAATGAGGCAGGGAGCAGAGG  400

seq1  CCTGAGCAAATCCAAGAAACAAAAGCTCAGTGGCAGGACGGAGCAGTATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGCAAATCCAAGAAACAAAAGCTCAGTGGCAGGACGGAGCAGTATG  450

seq1  GGGTTAGGCCCGCTCCCACTCTGAGCCTTTCTTTCTTTCTATCTGGGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTAGGCCCGCTCCCACTCTGAGCCTTTCTTTCTTTCTATCTGGGTTT  500

seq1  CAGCCTCTGTAACTGACATCTTAGGCCTGAATGTGGTAGGCTATGCTATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTCTGTAACTGACATCTTAGGCCTGAATGTGGTAGGCTATGCTATG  550

seq1  CATTACTGGACATTTAAGTTCATCTTAGCCTCCACCCATTAGA-TGCCAA  599
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CATTACTGGACATTTAAGTTCATCTTAGCCTCCACCCATTAGATTGCCAA  600

seq1  TTATACAGCCGACCTTGCCAGTCCTGACACCTCAAGGTGCCTCCAGACAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACAGCCGACCTTGCCAGTCCTGACACCTCAAGGTGCCTCCAGACAT  650

seq1  GCCCAGCTTCTCAGGATGTGGG  671
      ||||||||||||||||||||||
seq2  GCCCAGCTTCTCAGGATGTGGG  672

seq1: chr7_129260451_129261094
seq2: B6Ng01-105K22.g_70_713 (reverse)

seq1  TGGAGTTGAAAGTAATTGTGTGCCACCTATTGTAGGTGCTGGGAACCCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTTGAAAGTAATTGTGTGCCACCTATTGTAGGTGCTGGGAACCCAA  50

seq1  CCCAGATAGATCCTCTTTAAGTGCAGCAAGTAGCCTTAAACACCGAATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGATAGATCCTCTTTAAGTGCAGCAAGTAGCCTTAAACACCGAATAA  100

seq1  TCTTTGCATACCAGAAACTCAGATTCTTTTAAGATGCCCTGCTTTTAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGCATACCAGAAACTCAGATTCTTTTAAGATGCCCTGCTTTTAATA  150

seq1  CTGAAGTGTGAGTTATAATGTGTACTCAGAATAACTGAAAAGAACAAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGTGTGAGTTATAATGTGTACTCAGAATAACTGAAAAGAACAAAGA  200

seq1  TGGTGGAGTGTCAGAGCGAGAGCAAGAGCGAGAGTGAGAGCGAGAGCGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGAGTGTCAGAGCGAGAGCAAGAGCGAGAGTGAGAGCGAGAGCGAG  250

seq1  AGCGAGAGCGAGAGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGAGAGCGAGAGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGG  300

seq1  CAAGCACATGTGGAGTTCTCAGAAACTGCGTACCTGATTTCTCTGATTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCACATGTGGAGTTCTCAGAAACTGCGTACCTGATTTCTCTGATTTC  350

seq1  CAAACTTCCCAAAGCTACACATATAAGATTGTAAACATCAGGCACTGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTTCCCAAAGCTACACATATAAGATTGTAAACATCAGGCACTGGAA  400

seq1  CTATTTGTAATACTGGAACCTACATAAAAGAAAGTTATATTCAGTCACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTGTAATACTGGAACCTACATAAAAGAAAGTTATATTCAGTCACTT  450

seq1  ATAGTTTCATGAATATTTCAGGAAAAATTTTATCACTCTTTTATGTTACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTTCATGAATATTTCAGGAAAAATTTTATCACTCTTTTATGTTACT  500

seq1  CCTAGCTTTCTTTTTATTTTTTATTTTGTGATGGGGTCATATTAAGTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCTTTCTTTTTATTTTTTATTTTGTGATGGGGTCATATTAAGTTGT  550

seq1  GTAGGTTGGCCCTGAACCTGTGATCTTCCTGCCTCAGCCTTCTGAGGAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTTGGCCCTGAACCTGTGATCTTCCTGCCTCAGCCTTCTGAGGAGC  600

seq1  TGAGATTACAGGCCTGAGCCTGCTAATCACATTCTCTTGAATTC  644
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATTACAGGCCTGAGCCTGCTAATCACATTCTCTTGAATTC  644