BAC Information

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BAC

Clone NameB6Ng01-105N04
Chromosome7 (Build37)
Map Location 94,905,046 - 95,085,474
singlet/doubletdoublet
Overlap geneGrm5
Upstream geneFolh1, EG546983, Vmn2r-ps87, LOC637896, EG621430, LOC621477, Nox4, Tyr
Downstream geneCtsc, LOC100039756, Rab38, LOC100039924, LOC666598, EG621562
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-105N04.bB6Ng01-105N04.g
ACCDH913738DH913739
length1,189915
definitionDH913738|Mus musculus domesticus DNA, BAC clone: B6Ng01-105N04, 5' end.DH913739|Mus musculus domesticus DNA, BAC clone: B6Ng01-105N04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,905,046 - 94,906,242)(95,084,561 - 95,085,474)
sequence
gaattcagtgctcaggtagtttctaaattcctcccagttttttggaaggg
gtgagtattaaaaaatagggaagtaaagtttaaatgttaattgcttgtaa
gtgacctttctgaattgcttgtttggtgggcttgactctgaattgtttaa
aaagatctcagatagtgtatttttctaaataaaattgatttgttaaaagg
tcatatacatgatttagagacatgttggtcagaagaagcagataagtatt
tgcaaattaaatggctacagttcagaaggtctttaacaaaggcctattag
gcagttggcaacttcagaacttcaatattcattttctggtgaatcaggtg
attgaaaatcctatacaacatggatatgcctacagtggatttctatttga
agtgaaccattactgtttaaaacactaataatttcaaatcatatctagaa
gacatatttataaaacaaagcattttcacaatactgtaatagcatgttgt
aagtatatatcatgtcatcagatgtataatttgccatcagatgtatatcc
atctgtctataatccttctatacaggtataaatttgttctttatttggac
agtaattaaaattatattactaacaaatgatgaatataataaggattatg
ctgaaataattgttccttaactggaatacctatgccaactaccatttcca
tgccactaaataaacaattgtaaatccattctaaactttgatagttcaat
agtgttttcattttaattaaaccataactttcttagacaacctctcactg
tgagatatatgctttttccaaatgttccataatatatggcctacataaga
tgagacatggtttcacgttgcagaaactgacttgtaatttactccttagt
tgaggctggccttaaacacatgatccacctactctatcacttaactgttg
gaattataaggcacactctgctaccataccttgcttgaaaagatgattaa
aataaactcactctttcacgcatataagtcatatttttctgttttgttct
aaagtataaagtcatgccaatatgtggaataaccggagacacaattcagt
ttttgtatagccttacctgagattgatgtcaattccaagcacagcaaggg
aaaaacaaccctaggagcgtgtcaataatactacacatg
gaattcctagcctgacttagttcctggtagagaggaagaaaccatgtgca
tctgtggattgacttaacaaatgatctttttttttttttctgtatgtaaa
gtataggcttttaggagtgaaaattgtggatgtatactggattgatcaaa
gttaatacttaaaaagcattttgtttaggctcaagtgtccttgtcaccca
ctttttatataactatataattataggttttaaacctatgactagaaatg
attatttaggtacacacacacacatatatttgtatattcatatatatata
tgaataagagataaattattcttctttatgaatttcatactatggcaata
aaagaatagattaattactttccaagtaattcccttgtttgtgacatcta
aaatgttttaggatggtggttcactttaagctttttatatctacatttca
ttgtgacagttgtgaaagattttaggctgctaccaagacctaactgggtc
tctatctaggaaaatccctcacctaaaaggaagtaggaaggtgtctcatc
ccagggactgttcatccaaacaattctgctttcaaagacaatgacatgta
gatataaaaaggctaaccattttgcaacagaattttaatccagcagcaca
tctctgtgatacatttggaatgctaacatgccacacaatttaatttcata
gtctggaatacagacacgagacacatccttagtccacacctttaatccca
aacaatggaggtaaagttagtttgtagaaagacagcatgcttgaaagtaa
tttctaattgggggaaaagacaaagtgatgaatcagaaagatatgatgag
tcccagatagaatacacccaaatctcatgagaacagacaatagagatggg
gggggagagagaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_94905046_94906242
seq2: B6Ng01-105N04.b_48_1236

seq1  GAATTCAGTGCTCAGGTAGTTTCTAAATTCCTCCCAGTTTTTTGGAAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGCTCAGGTAGTTTCTAAATTCCTCCCAGTTTTTTGGAAGGG  50

seq1  GTGAGTATTAAAAAATAGGGAAGTAAAGTTTAAATGTTAATTGCTTGTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTATTAAAAAATAGGGAAGTAAAGTTTAAATGTTAATTGCTTGTAA  100

seq1  GTGACCTTTCTGAATTGCTTGTTTGGTGGGCTTGACTCTGAATTGTTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACCTTTCTGAATTGCTTGTTTGGTGGGCTTGACTCTGAATTGTTTAA  150

seq1  AAAGATCTCAGATAGTGTATTTTTCTAAATAAAATTGATTTGTTAAAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATCTCAGATAGTGTATTTTTCTAAATAAAATTGATTTGTTAAAAGG  200

seq1  TCATATACATGATTTAGAGACATGTTGGTCAGAAGAAGCAGATAAGTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATACATGATTTAGAGACATGTTGGTCAGAAGAAGCAGATAAGTATT  250

seq1  TGCAAATTAAATGGCTACAGTTCAGAAGGTCTTTAACAAAGGCCTATTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAATTAAATGGCTACAGTTCAGAAGGTCTTTAACAAAGGCCTATTAG  300

seq1  GCAGTTGGCAACTTCAGAACTTCAATATTCATTTTCTGGTGAATCAGGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTGGCAACTTCAGAACTTCAATATTCATTTTCTGGTGAATCAGGTG  350

seq1  ATTGAAAATCCTATACAACATGGATATGCCTACAGTGGATTTCTATTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAAATCCTATACAACATGGATATGCCTACAGTGGATTTCTATTTGA  400

seq1  AGTGAACCATTACTGTTTAAAACACTAATAATTTCAAATCATATCTAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAACCATTACTGTTTAAAACACTAATAATTTCAAATCATATCTAGAA  450

seq1  GACATATTTATAAAACAAAGCATTTTCACAATACTGTAATAGCATGTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATATTTATAAAACAAAGCATTTTCACAATACTGTAATAGCATGTTGT  500

seq1  AAGTATATATCATGTCATCAGATGTATAATTTGCCATCAGATGTATATCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATATATCATGTCATCAGATGTATAATTTGCCATCAGATGTATATCC  550

seq1  ATCTGTCTATAATCCTTCTATACAGGTATAAATTTGTTCTTTATTTGGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTCTATAATCCTTCTATACAGGTATAAATTTGTTCTTTATTTGGAC  600

seq1  AGTAATTAAAATTATATTACTAACAAATGATGAATATAATAAGGATTATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATTAAAATTATATTACTAACAAATGATGAATATAATAAGGATTATG  650

seq1  CTGAAATAATTGTTCCTTAACTGGAATACCTATGCCAACTACCATTTCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAATAATTGTTCCTTAACTGGAATACCTATGCCAACTACCATTTCCA  700

seq1  TGCCACTAAATAAACAATTGTAAATCCATTCTAAACTTTGATAGTTCAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACTAAATAAACAATTGTAAATCCATTCTAAACTTTGATAGTTCAAT  750

seq1  AGTGTTTTCATTTTAATTAAACCATAACTTTCTTAGACAACCTCTCACTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTTCATTTTAATTAAACCATAACTTTCTTAGACAACCTCTCACTG  800

seq1  TGAGATATATGCTTTTTCCAAATGTTCCATAATATATGGCCTACATAAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATATATGCTTTTTCCAAATGTTCCATAATATATGGCCTACATAAGA  850

seq1  TGAGACATGGTTTCACGTTGCAGAAACTGACTTGTAATTTACTCCTTAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACATGGTTTCACGTTGCAGAAACTGACTTGTAATTTACTCCTTAGT  900

seq1  TGAGGCTGGCCTTAAACACATGATCCACCTACTCTATCACTTAACTGTTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCTGGCCTTAAACACATGATCCACCTACTCTATCACTTAACTGTTG  950

seq1  GAATTAT-AGGCACACTCTGCTACCATACCTTGCTTGAAAAGATGATTAA  999
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTATAAGGCACACTCTGCTACCATACCTTGCTTGAAAAGATGATTAA  1000

seq1  AATAAAACTCAACTCTTTCACGCATAATAAGTCATA-TTTTCTGTTTTGT  1048
      ||| |||||| |||||||||||||| |||||||||| |||||||||||||
seq2  AAT-AAACTC-ACTCTTTCACGCAT-ATAAGTCATATTTTTCTGTTTTGT  1047

seq1  TCTAAAGGTATAAAGTCATGGCAATATGT-GAATAACC-GAGACAACCAA  1096
      |||||| ||||||||||||| |||||||| |||||||| ||||| || | 
seq2  TCTAAA-GTATAAAGTCATGCCAATATGTGGAATAACCGGAGAC-ACAAT  1095

seq1  TCAGTTTTTGTATAGGCCTTACACTGAGATTGATGTCAAAATTCAAAGCA  1146
      |||||||||||||| ||||||| ||||||||||||||  ||||| |||||
seq2  TCAGTTTTTGTATA-GCCTTAC-CTGAGATTGATGTC--AATTCCAAGCA  1141

seq1  CAGCAAGGAAAAAAACAACTCTAGGAAGCTGTCCAATAATTACTACACAT  1196
      ||||||||  ||||||||| ||||||   ||| |||||| ||||||||||
seq2  CAGCAAGG-GAAAAACAACCCTAGGAGCGTGT-CAATAA-TACTACACAT  1188

seq1  G  1197
      |
seq2  G  1189

seq1: chr7_95084561_95085474
seq2: B6Ng01-105N04.g_69_983 (reverse)

seq1  CCCTCTCTCT-CCCCCCCATCTCTATTGTCTGTTCTCATGAGATTTGGGT  49
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTCTCTCCCCCCCCATCTCTATTGTCTGTTCTCATGAGATTTGGGT  50

seq1  GTATTCTATCTGGGACTCATCATATCTTTCTGATTCATCACTTTGTCTTT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCTATCTGGGACTCATCATATCTTTCTGATTCATCACTTTGTCTTT  100

seq1  TCCCCCAATTAGAAATTACTTTCAAGCATGCTGTCTTTCTACAAACTAAC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCAATTAGAAATTACTTTCAAGCATGCTGTCTTTCTACAAACTAAC  150

seq1  TTTACCTCCATTGTTTGGGATTAAAGGTGTGGACTAAGGATGTGTCTCGT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCTCCATTGTTTGGGATTAAAGGTGTGGACTAAGGATGTGTCTCGT  200

seq1  GTCTGTATTCCAGACTATGAAATTAAATTGTGTGGCATGTTAGCATTCCA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTATTCCAGACTATGAAATTAAATTGTGTGGCATGTTAGCATTCCA  250

seq1  AATGTATCACAGAGATGTGCTGCTGGATTAAAATTCTGTTGCAAAATGGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTATCACAGAGATGTGCTGCTGGATTAAAATTCTGTTGCAAAATGGT  300

seq1  TAGCCTTTTTATATCTACATGTCATTGTCTTTGAAAGCAGAATTGTTTGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTTTTTATATCTACATGTCATTGTCTTTGAAAGCAGAATTGTTTGG  350

seq1  ATGAACAGTCCCTGGGATGAGACACCTTCCTACTTCCTTTTAGGTGAGGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACAGTCCCTGGGATGAGACACCTTCCTACTTCCTTTTAGGTGAGGG  400

seq1  ATTTTCCTAGATAGAGACCCAGTTAGGTCTTGGTAGCAGCCTAAAATCTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCTAGATAGAGACCCAGTTAGGTCTTGGTAGCAGCCTAAAATCTT  450

seq1  TCACAACTGTCACAATGAAATGTAGATATAAAAAGCTTAAAGTGAACCAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAACTGTCACAATGAAATGTAGATATAAAAAGCTTAAAGTGAACCAC  500

seq1  CATCCTAAAACATTTTAGATGTCACAAACAAGGGAATTACTTGGAAAGTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTAAAACATTTTAGATGTCACAAACAAGGGAATTACTTGGAAAGTA  550

seq1  ATTAATCTATTCTTTTATTGCCATAGTATGAAATTCATAAAGAAGAATAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATCTATTCTTTTATTGCCATAGTATGAAATTCATAAAGAAGAATAA  600

seq1  TTTATCTCTTATTCATATATATATATGAATATACAAATATATGTGTGTGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTCTTATTCATATATATATATGAATATACAAATATATGTGTGTGT  650

seq1  GTGTACCTAAATAATCATTTCTAGTCATAGGTTTAAAACCTATAATTATA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTACCTAAATAATCATTTCTAGTCATAGGTTTAAAACCTATAATTATA  700

seq1  TAGTTATATAAAAAGTGGGTGACAAGGACACTTGAGCCTAAACAAAATGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTATATAAAAAGTGGGTGACAAGGACACTTGAGCCTAAACAAAATGC  750

seq1  TTTTTAAGTATTAACTTTGATCAATCCAGTATACATCCACAATTTTCACT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAGTATTAACTTTGATCAATCCAGTATACATCCACAATTTTCACT  800

seq1  CCTAAAAGCCTATACTTTACATACAGAAAAAAAAAAAAAGATCATTTGTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAAAGCCTATACTTTACATACAGAAAAAAAAAAAAAGATCATTTGTT  850

seq1  AAGTCAATCCACAGATGCACATGGTTTCTTCCTCTCTACCAGGAACTAAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAATCCACAGATGCACATGGTTTCTTCCTCTCTACCAGGAACTAAG  900

seq1  TCAGGCTAGGAATTC  914
      |||||||||||||||
seq2  TCAGGCTAGGAATTC  915