BAC Information

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BAC

Clone NameB6Ng01-105O14
Chromosome7 (Build37)
Map Location 126,850,564 - 126,851,626
singlet/doubletsinglet
Overlap geneBC048390
Upstream gene6330503K22Rik, 9030624J02Rik, 2310008H09Rik, Iqck, Gprc5b, Gpr139, LOC100042871, Gp2, Umod, 1700007B13Rik, C730027J19Rik, Acsm2, Acsm1
Downstream geneThumpd1, EG434233, Acsm3, Exod1, 2610020H08Rik, Dcun1d3, LOC100043399, LOC100043396, Lyrm1, Dnahc3, Tmem159, Zp2, Anks4b, Crym, Abca14, Abca15, Abca16, LOC668429, LOC546994, LOC100042914, E130201H02Rik, LOC637957, Uqcrc2, 4930408O21Rik, BC030336
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-105O14.bB6Ng01-105O14.g
ACCDH913804DH913805
length8041,060
definitionDH913804|Mus musculus domesticus DNA, BAC clone: B6Ng01-105O14, 5' end.DH913805|Mus musculus domesticus DNA, BAC clone: B6Ng01-105O14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaggtttataagcttttgttatgcaaaccttgttccttgattt
aaaacttctggttaagtaaaactgattacagagattagaggtggatgcat
ttggagctgggggaggggagagagaagagaataggaagaggaagaatagg
agaagagaggaagccaccatgaagagagcatgaagatggactatgagcac
acggccaggagaaatagcaagaatctggagtacaccgctagggagggagc
caggccagcatttacaagaatagactaggggttaccccctcagtaattgc
caaagccaaataaaataaccatagtctgtgtctcatttatttgtaagcta
gcaggggttaagcttaaattgttggtactacaccccaccgtccaatccac
tccctttctgtctctcattagaaaagaacagatttcaaagagataaccaa
acaagaccaaacaaaatacaataagatgaaagcaaaacttccatattgac
attggacatgacaaaccaacagaagggaaagagtcccaacaagcaggcac
agaaatactaagctaataactataatatatgcacagccttgtgcttgctg
cttcagtctctgtgagcacatatgtgtcttgcttagttttattcagcaga
gggcctttgttcttctggtgtcctgtgattcttaacaatctttttttgcc
tcctctcctgtggaatttttctgagctctaaggaaaaagaatttggatgg
aaaacatcaaaatttagactctctacatgatgtctggctgtgggtctctg
aatc
gaattcaacagtagatgcctgtttctaaagcatgtacattcctccattaa
ctagaaacccccaacatgtcactaatgacaactggtaaatacttactttc
ttattccatgggattagtaggcagtaatggaaaagaaaggttatagatgt
catctatagccatggtctctagctgaccattactgacatgtctgtttttc
tctctcttccagacacttaccacatatcccatcacgaccctgtgcagtgc
tcctacggtgtaccggatgctcgtacaaaaggaccttaagaggtactggg
cagaactctccatttaagccacaagcagaagctgccatacaacattacag
agcttcctttaccatacagggaggcccagaaatctgaatcttactgtata
gacattctggaccaaataactattctgtataccttatgatactgagcaga
tgccattagcattgtcctctcctttttcttcgttcatgacaattaaaatg
tcctaagatattacctaatacattatagggacaaaatcatatgccatctt
aaaatccagggtaagggctgggagatgaccagtcagtcgcatgcttacct
cctgtcttagtcagggtttctattcctgcacaaacatcattaccaagaag
caagttggggaggaaagggtttatttggcttatacttccatactgctgtt
catcaccaaggaatttcaggactggaactcaagcaggtcagaaagcaaga
gccgatgcagaagccatggaaaggatggatgttctttgatggcttcttcc
cttggcttgttcagcctgctctcttataagaacccaagactgctagccca
gagatgatcccacctgcaagggcctttcccccttgatcacttattgagag
aatacctcacagctggatctcgtggaggcatttccccaactgaagcttct
ttctctgtgataccccagcctgtgtcaagttgacacataaaaccagtcag
tacaccacccagtatgaagatctgagtttgatccctgagtcggaacattc
aggtgtttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_126850564_126851626
seq2: B6Ng01-105O14.g_69_1128

seq1  GAATTCAACAGTAGATGCCTGTTTCTAAAGCATGTACATTCCTCCATTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACAGTAGATGCCTGTTTCTAAAGCATGTACATTCCTCCATTAA  50

seq1  CTAGAAACCCCCAACATGTCACTAATGACAACTGGTAAATACTTACTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAACCCCCAACATGTCACTAATGACAACTGGTAAATACTTACTTTC  100

seq1  TTATTCCATGGGATTAGTAGGCAGTAATGGAAAAGAAAGGTTATAGATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCCATGGGATTAGTAGGCAGTAATGGAAAAGAAAGGTTATAGATGT  150

seq1  CATCTATAGCCATGGTCTCTAGCTGACCATTACTGACATGTCTGTTTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTATAGCCATGGTCTCTAGCTGACCATTACTGACATGTCTGTTTTTC  200

seq1  TCTCTCTTCCAGACACTTACCACATATCCCATCACGACCCTGTGCAGTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTTCCAGACACTTACCACATATCCCATCACGACCCTGTGCAGTGC  250

seq1  TCCTACGGTGTACCGGATGCTCGTACAAAAGGACCTTAAGAGGTACTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACGGTGTACCGGATGCTCGTACAAAAGGACCTTAAGAGGTACTGGG  300

seq1  CAGAACTCTCCATTTAAGCCACAAGCAGAAGCTGCCATACAACATTACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACTCTCCATTTAAGCCACAAGCAGAAGCTGCCATACAACATTACAG  350

seq1  AGCTTCCTTTACCATACAGGGAGGCCCAGAAATCTGAATCTTACTGTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCCTTTACCATACAGGGAGGCCCAGAAATCTGAATCTTACTGTATA  400

seq1  GACATTCTGGACCAAATAACTATTCTGTATACCTTATGATACTGAGCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTCTGGACCAAATAACTATTCTGTATACCTTATGATACTGAGCAGA  450

seq1  TGCCATTAGCATTGTCCTCTCCTTTTTCTTCGTTCATGACAATTAAAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATTAGCATTGTCCTCTCCTTTTTCTTCGTTCATGACAATTAAAATG  500

seq1  TCCTAAGATATTACCTAATACATTATAGGGACAAAATCATATGCCATCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAGATATTACCTAATACATTATAGGGACAAAATCATATGCCATCTT  550

seq1  AAAATCCAGGGTAAGGGCTGGGAGATGACCAGTCAGTCGCATGCTTACCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCCAGGGTAAGGGCTGGGAGATGACCAGTCAGTCGCATGCTTACCT  600

seq1  CCTGTCTTAGTCAGGGTTTCTATTCCTGCACAAACATCATTACCAAGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCTTAGTCAGGGTTTCTATTCCTGCACAAACATCATTACCAAGAAG  650

seq1  CAAGTTGGGGAGGAAAGGGTTTATTTGGCTTATACTTCCATACTGCTGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTGGGGAGGAAAGGGTTTATTTGGCTTATACTTCCATACTGCTGTT  700

seq1  CATCACCAAGGAA-TTCAGGACTGGAACTCAAGCAGGTCAGAAAGCAAGA  749
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CATCACCAAGGAATTTCAGGACTGGAACTCAAGCAGGTCAGAAAGCAAGA  750

seq1  GCCGATGCAGAAGCCATGG-AAGGATGGATGTTCTTTGATGGCTTCTTCC  798
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GCCGATGCAGAAGCCATGGAAAGGATGGATGTTCTTTGATGGCTTCTTCC  800

seq1  CTTGGCTTGTTCAGCCTGCTCTCTTATAAGAACCCAAGACTGCTAGCCCA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCTTGTTCAGCCTGCTCTCTTATAAGAACCCAAGACTGCTAGCCCA  850

seq1  GAGATGATCCCACCTGCAAGGGGCCTTTCCCCCTTGATCACTTATTGAGA  898
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GAGATGATCCCACCTGCAA-GGGCCTTTCCCCCTTGATCACTTATTGAGA  899

seq1  GAATACCTCACAGCTGGATCTCGTGGAGGCATTTCCCCAACTGAAGCTCC  948
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GAATACCTCACAGCTGGATCTCGTGGAGGCATTTCCCCAACTGAAGCTTC  949

seq1  TTTCTCTGTGATAACCCCAGCCTGTGTCAAGTTGACACATAAAACCAGCC  998
      |||||||||||| ||||||||||||||||||||||||||||||||||| |
seq2  TTTCTCTGTGAT-ACCCCAGCCTGTGTCAAGTTGACACATAAAACCAGTC  998

seq1  AGTACACCACCCAAGTATGAGGATCTGAGTTTGATCCCCTGAGTCGTGAA  1048
      |||||||||||| ||||||| |||||||||||||| |||||||||| |||
seq2  AGTACACCACCC-AGTATGAAGATCTGAGTTTGAT-CCCTGAGTCG-GAA  1045

seq1  CATCCAGGTGTTGTA  1063
      ||| |||||||| ||
seq2  CATTCAGGTGTTTTA  1060