BAC Information

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BAC

Clone NameB6Ng01-106C19
Chromosome7 (Build37)
Map Location 59,455,630 - 59,456,831
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668779, Tmem16e, Slc17a6, EG620599, LOC654473, LOC100040608, Gas2, 1700015G11Rik, EG668783
Downstream geneEG620782, LOC100040692, Gm1865
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-106C19.bB6Ng01-106C19.g
ACCDH913990DH913991
length1,1901,200
definitionDH913990|Mus musculus domesticus DNA, BAC clone: B6Ng01-106C19, 5' end.DH913991|Mus musculus domesticus DNA, BAC clone: B6Ng01-106C19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccacaaacacaaacaaagtacaaaaacaaaataagaaaaaaaatt
ttttgttaagtgatgataattatgataatcagttcatttcccctactaaa
atcataagtttgttagtaagatgcaaaaatgaaatcaggatggattttta
ttttttctaaaaattcaaataccatatactgttgaaatgaagacccccaa
atattaactgaaacaaataaaatacaaaaggcaacagcaatgaacctgaa
ttatatgagaacgtactgcaggccctggtgtagggattctgttttcagta
tagctctgagtcctgagtcagctctgagtcaggagataattaaagaaaag
gcttcctaggaagaagacatcagactccacctcggaatgtgctctgtgtg
tatccagcttgggaactgaagatgaggtgacgcaggttattgtaccctgc
agtggtcacaataaccccaagtttgcaaaattgtaaggtgggggatccta
tagcgttcaaggtcatctaagacaaatgcttaacattatagacaagcttg
tccctgtcattaaaccttctgtaaggtggctcagctgacctgggatgttg
ctggtcaaaagccagtcatctttgcccatctttatcctctttaatagcca
tttattgaccacctttgcatgtgacctaacatccttgtgactgataagta
aatcctttgcaatgtgtaacagtcccctaattgtcactaaacccaaagct
aagaatgtccagagatggagcctgctgcctgcgtcagagatttattagct
ctcctgtcatgcacatacctgatgcttccaccaccatgcagttgaaaatc
atgttgatctatggctttattttgttctcgttctataaagcttcatgaac
ttcacatgtctgtgtgtgtgaataaaacttcccttctagaggaacatttg
aattctcatcaagtgaaacaagggactaattattttaataataaatatca
gcccagttccatgataactatagatgtaatattctggaataattttacct
gcctacagtatactaaatttcatttaataagttcatgtattcagtccatt
aaatgaaagttataaaccaacacacaactgtgaagttataaacaatccag
tgaacgccactggaattggaggaattctggccttacctga
gaattcacctggaccagagaacatcagctagcctttgaaactctcaaaaa
ggcactgctgcaggctccggcattggccctgccagatttaaacaaacctt
tcaccctatacattgatgaaagaaatggagtggcaaggggagtccttacc
caggttttgggaccatggaagcgcccggtagcctacttatcaaagaaact
ggacgctgtggccagtggatggccctcctgcctgcgagcgatagcagcca
cggctgtgctagtaaaagatgctgacaaactgactatgggccagaatgtt
actatagtggccccacactctcttgagagcatcatcaggcaaccaccgga
ccgctggatgaccaacgcccgaatgacgcactaccagagcctattgctga
cagagcgagtaagttttgcacccccagccattctcaaccccgcctcctta
ctacctgaggctgacgaggcccctgcacataagtgtgaagaaatactggc
agaagagactggaatccggccagacctcacagaccaaccttggccagggg
cgatgacttggttcacggacggaagcagctttgtggtagaaggtaagcgg
aaggctggggcggcagtagtggatggaaaggctgtcatatgggccagcag
tctgccggagggtacatcagctcaaaaagcggaactaatcgcattaattc
aagccttaaggctggcagaaggaagggctcttaatgtctataccgacagc
cggtacgcttttgccacggctcatgtacacggagcaatataccgacaccg
tagactgctgacgtctgccggcaaaaatatcaaaaataaagaagaaattc
tcagcttattagaagctgttcatttgccccgtacggtggcaattatccat
tgcccaggacaccagaaggaactgggcccgttgaaaagggaaatcaaatg
gcagaccagagctaaaaagcagcccaggtatgactctgtgtgagaaccca
cagccgctgctgagaaataataaagaaccctccagagaggagggggcgag
atactaagctacatacaccatctgactcatttagaactaaaatactaaat
ggtagtagttcccctattaatctgattagatggggagaaatgtaaactgc
tcttggatcaagcttgctcgtcacgtccgagacgcactctcgaggaggta

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_59455630_59456831
seq2: B6Ng01-106C19.b_42_1231

seq1  GAATTCCACAAACACAAACAAAGTACAAAAACAAAATAAGAAAAAAAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACAAACACAAACAAAGTACAAAAACAAAATAAGAAAAAAAATT  50

seq1  TTTTGTTAAGTGATGATAATTATGATAATCAGTTCATTTCCCCTACTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTAAGTGATGATAATTATGATAATCAGTTCATTTCCCCTACTAAA  100

seq1  ATCATAAGTTTGTTAGTAAGATGCAAAAATGAAATCAGGATGGATTTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATAAGTTTGTTAGTAAGATGCAAAAATGAAATCAGGATGGATTTTTA  150

seq1  TTTTTTCTAAAAATTCAAATACCATATACTGTTGAAATGAAGACCCCCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTAAAAATTCAAATACCATATACTGTTGAAATGAAGACCCCCAA  200

seq1  ATATTAACTGAAACAAATAAAATACAAAAGGCAACAGCAATGAACCTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAACTGAAACAAATAAAATACAAAAGGCAACAGCAATGAACCTGAA  250

seq1  TTATATGAGAACGTACTGCAGGCCCTGGTGTAGGGATTCTGTTTTCAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATGAGAACGTACTGCAGGCCCTGGTGTAGGGATTCTGTTTTCAGTA  300

seq1  TAGCTCTGAGTCCTGAGTCAGCTCTGAGTCAGGAGATAATTAAAGAAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCTGAGTCCTGAGTCAGCTCTGAGTCAGGAGATAATTAAAGAAAAG  350

seq1  GCTTCCTAGGAAGAAGACATCAGACTCCACCTCGGAATGTGCTCTGTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCTAGGAAGAAGACATCAGACTCCACCTCGGAATGTGCTCTGTGTG  400

seq1  TATCCAGCTTGGGAACTGAAGATGAGGTGACGCAGGTTATTGTACCCTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCAGCTTGGGAACTGAAGATGAGGTGACGCAGGTTATTGTACCCTGC  450

seq1  AGTGGTCACAATAACCCCAAGTTTGCAAAATTGTAAGGTGGGGGATCCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTCACAATAACCCCAAGTTTGCAAAATTGTAAGGTGGGGGATCCTA  500

seq1  TAGCGTTCAAGGTCATCTAAGACAAATGCTTAACATTATAGACAAGCTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCGTTCAAGGTCATCTAAGACAAATGCTTAACATTATAGACAAGCTTG  550

seq1  TCCCTGTCATTAAACCTTCTGTAAGGTGGCTCAGCTGACCTGGGATGTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGTCATTAAACCTTCTGTAAGGTGGCTCAGCTGACCTGGGATGTTG  600

seq1  CTGGTCAAAAGCCAGTCATCTTTGCCCATCTTTATCCTCTTTAATAGCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCAAAAGCCAGTCATCTTTGCCCATCTTTATCCTCTTTAATAGCCA  650

seq1  TTTATTGACCACCTTTGCATGTGACCTAACATCCTTGTGACTGATAAGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTGACCACCTTTGCATGTGACCTAACATCCTTGTGACTGATAAGTA  700

seq1  AATCCTTTGCAATGTGTAACAGTCCCCTAATTGTCACTAAACCCAAAGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTTTGCAATGTGTAACAGTCCCCTAATTGTCACTAAACCCAAAGCT  750

seq1  AAGAATGTCCAGAGATGGAGCCTGCTGCCTGCGTCAGAGATTTATTAGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATGTCCAGAGATGGAGCCTGCTGCCTGCGTCAGAGATTTATTAGCT  800

seq1  CTCCTGTCATGCACATACCTGATGCTTCCACCACCATGCAGTTGAAAATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGTCATGCACATACCTGATGCTTCCACCACCATGCAGTTGAAAATC  850

seq1  ATGTTGATCTATGGCTTTATTTTGTTCTCGTTCTATAAAAGCTTCATGAA  900
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ATGTTGATCTATGGCTTTATTTTGTTCTCGTTCTAT-AAAGCTTCATGAA  899

seq1  CTTCACATGTCTGTGTGTGTGAATAAAACTTCCCTTCTAGAGGAACATTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACATGTCTGTGTGTGTGAATAAAACTTCCCTTCTAGAGGAACATTT  949

seq1  GAATTCTCATCAAGTGAAAACAAGGGACTAATTATTTTAATAATAAATAT  1000
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GAATTCTCATCAAGTG-AAACAAGGGACTAATTATTTTAATAATAAATAT  998

seq1  CAGCCCAGTTCCATGATAACTATAGATGTAATATTCTGGAATAATTTTAC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCAGTTCCATGATAACTATAGATGTAATATTCTGGAATAATTTTAC  1048

seq1  CTGCCTACAGTATACTAAATTTCATTTAATATAGTTTCATGTATTCAGGT  1100
      ||||||||||||||||||||||||||||||| || |||||||||||| ||
seq2  CTGCCTACAGTATACTAAATTTCATTTAATA-AG-TTCATGTATTCA-GT  1095

seq1  CCAATTAAAATGAAAAGTTTATATACACACACACAGACATGTGAAGTTAT  1150
      |||  | ||||||||   ||||| ||  ||||||| || |||||||||| 
seq2  CCA--TTAAATGAAA--GTTATAAACCAACACACA-AC-TGTGAAGTTA-  1138

seq1  TAAACAATCCAGTGAACGCCACTGGAATT-GAGGATTTTCTGGCCTTAAC  1199
      ||||||||||||||||||||||||||||| |||||  ||||||||||| |
seq2  TAAACAATCCAGTGAACGCCACTGGAATTGGAGGA-ATTCTGGCCTTACC  1187

seq1  TGA  1202
      |||
seq2  TGA  1190