BAC Information

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BAC

Clone NameB6Ng01-107C13
Chromosome7 (Build37)
Map Location 108,575,251 - 108,575,936
singlet/doubletsinglet
Overlap genePde2a
Upstream geneAU020772, Ucp3, Ucp2, Dnajb13, LOC667112, Chchd8, Mrpl48, LOC100041155, Rab6, LOC100041167, Plekhb1, B930006L02Rik, LOC100041204, Tnfrsf19l, Arhgef17, P2ry6, P2ry2, LOC100049539, EG435996, Fchsd2, EG622673, Atg16l2, Stard10, Centd2
Downstream geneArt2a, EG630138, Art2b, Clpb, Phox2a, Inppl1, Folr2, Folr1, 3200002M19Rik, F930017I19Rik, 2400001E08Rik, Lrrc51, LOC667222, Numa1, Il18bp, Rnf121, Trpc2, Art5, Art1, Chrna10, Nup98, Frag1, Rhog, Stim1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107C13.bB6Ng01-107C13.g
ACCDH914704DH914705
length1,242687
definitionDH914704|Mus musculus domesticus DNA, BAC clone: B6Ng01-107C13, 5' end.DH914705|Mus musculus domesticus DNA, BAC clone: B6Ng01-107C13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagtttcataaagtcttgcccatgctcagaagggctttttggaga
agcaactgccttgagtatttgtgtttctataagtagccccaataaactct
ctggttcactaagcctaaagaaaaaaaaaaaaaaagggaggtggttcagt
ttgtggcagtagatgtctatagcacaaaatttatctggggcacagatcgg
gaagcagagagcttgtgcctgaagcaaggccaagctataactcttggtaa
gccatgcaaaccttgggttccaaaagttccctacatcttccccaaataat
gctgccacctgggacctaaatattcaagctttcaccctcaaactatagca
aatatgaacagttaaagtgaactggttactaaccgtatatcgggcactca
ctgtgacaaagaccttacagatttcattctcaagatagggctaccaatat
agtgcagcatctgccagttaactaactaactctcatcagttacatctgaa
ggactcacatggtggagggagaacactgcctccaggttgccctctgacct
ccacacacatgtcactgtgcctgtacctgcacacacacacccataaacaa
gtacatgaataaaaagtcaatgaaatttttttcataacttctgtcttagt
tagagttttattgctgtgaggagacaacatgaccatggcaactctttttt
tattattattattattattattattattattattattattataagacagg
gtttctttgtgtagctttggctaaacttacagagagatctgcctacctct
gcctcccaagtgctgggattaaaggcatgcatcacccccacccagcaacc
atggcaacacatataaataaaaacatttcattggggctggcttacagttt
cagaggtttagtccattatcgtcatggcagcatgcagcagacatggtgct
ggagaagagctgagagtctgcatcttgatctgcaggagcagaaagagact
ttgagtcaatcgggcataactagagccatatataagcctgtgcccacagt
gaaccacttcctccaacagccccacctaatagggcactcctgtgagccag
catttaaccatggtccggtcatgcttacccaactccacacctctagacag
ttcatggatgctaagtgacatggactaagagaggtacatgtaaagtcacc
tggatcgatagttcagtggcgtgaaccaaagttcaccaatgt
gtgagtgctcatatagaggctagctgctgtcactgtagaacacccacact
cacctacacttttagaccacggctaggagcccagagagcgtcagtgtgtg
ggaaagacaggaggcggtgggtgtggtgagaggcacagatgctctgtggg
cagaaggaggtgtctgatggacataagaccacctttctaggctgcacctg
cctggtctgaggccaacccccagaaggtacattggaagaaagagctcacc
gaggaaggggttaaactcgtggccacacccacagcagcttgagtcattct
gggaattgtagtttggtgtgagtttgcactaagtacacttggtctaacct
ctttccagccaaatctacaccctgccgctgaggctggtagttggcaggcc
ctagtagggtaggggttgggatctggggagctcatagatgaagcagcctt
gaccctttctctgctccctgtctgcttgctgtgtgcttcagtgtggcgtt
aggagcagggatcaaaggattaagtcataatgagaactcttgcacacgca
cagggaagtttacagctgcctgagcccgattttccacagctatgatcttc
ttttatcccctccacaaacccaagaggctgctgttttctggatgaaggag
cagatgattcaagaagggactgacttgcccactggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_108575251_108575936
seq2: B6Ng01-107C13.g_74_760

seq1  GTGAGTGCTCATATAGAGGCTAGCTGCTGTCACTGTAGAACACCCACACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTGCTCATATAGAGGCTAGCTGCTGTCACTGTAGAACACCCACACT  50

seq1  CACCTACACTTTTAGACCACGGCTAGGAGCCCAGAGAGCGTCAGTGTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTACACTTTTAGACCACGGCTAGGAGCCCAGAGAGCGTCAGTGTGTG  100

seq1  GGAAAGACAGGAGGCGGTGGGTGTGGTGAGAGGCACAGATGCTCTGTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGACAGGAGGCGGTGGGTGTGGTGAGAGGCACAGATGCTCTGTGGG  150

seq1  CAGAAGGAGGTGTCTGATGGACATAAGACCACCTTTCTAGGCTGCACCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGGAGGTGTCTGATGGACATAAGACCACCTTTCTAGGCTGCACCTG  200

seq1  CCTGGTCTGAGGCCAACCCCCAGAAGGTACATTGGAAGAAAGAGCTCACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTCTGAGGCCAACCCCCAGAAGGTACATTGGAAGAAAGAGCTCACC  250

seq1  GAGGAAGGGGTTAAACTCGTGGCCACACCCACAGCAGCTTGAGTCATTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAGGGGTTAAACTCGTGGCCACACCCACAGCAGCTTGAGTCATTCT  300

seq1  GGGAATTGTAGTTTGGTGTGAGTTTGCACTAAGTACACTTGGTCTAACCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATTGTAGTTTGGTGTGAGTTTGCACTAAGTACACTTGGTCTAACCT  350

seq1  CTTTCCAGCCAAATCTACACCCTGCCGCTGAGGCTGGTAGTTGGCAGGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCAGCCAAATCTACACCCTGCCGCTGAGGCTGGTAGTTGGCAGGCC  400

seq1  CTAGTAGGGTAGGGGTTGGGATCTGGGGAGCTCATAGATGAAGCAGCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTAGGGTAGGGGTTGGGATCTGGGGAGCTCATAGATGAAGCAGCCTT  450

seq1  GACCCTTTCTCTGCTCCCTGTCTGCTTGCTGTGTGCTTCAGTGTGGCGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTTTCTCTGCTCCCTGTCTGCTTGCTGTGTGCTTCAGTGTGGCGTT  500

seq1  AGGAGCAGGGATCAAAGGATTAAGTCATAATGAGAACTCTTGCACACGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCAGGGATCAAAGGATTAAGTCATAATGAGAACTCTTGCACACGCA  550

seq1  CAGGGAAGTTTACAGCTGCCTGAGCCCGA-TTTCCACAGCTATGATCTTC  599
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CAGGGAAGTTTACAGCTGCCTGAGCCCGATTTTCCACAGCTATGATCTTC  600

seq1  TTTAATCCCCTCCACAAACCCAAGAGGCTGCTGTTTTCTGGATGAAGGAG  649
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATCCCCTCCACAAACCCAAGAGGCTGCTGTTTTCTGGATGAAGGAG  650

seq1  CAGAGGATTCAAGAAGGGACTGACTTGCCCACTGGGA  686
      |||| ||||||||||||||||||||||||||||||||
seq2  CAGATGATTCAAGAAGGGACTGACTTGCCCACTGGGA  687