BAC Information

Click to search

BAC

Clone NameB6Ng01-107G18
Chromosome7 (Build37)
Map Location 48,116,753 - 48,117,941
singlet/doubletsinglet
Overlap genenone
Upstream geneEG628161
Downstream geneLOC100039094, 2900093B09Rik, 4930433I11Rik, EG233164, LOC668555, EG627987, LOC100039269, LOC545955, EG628304, LOC668561, EG434172, LOC100039221, LOC668565, AI987944, EG269902, LOC100039375, EG628359, 2610021A01Rik, 2810426N06Rik, LOC668576, Gprc2a-rs5, LOC628372, EG668579, EG628403, EG628422
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107G18.bB6Ng01-107G18.g
ACCDH914895DH914896
length1,170568
definitionDH914895|Mus musculus domesticus DNA, BAC clone: B6Ng01-107G18, 5' end.DH914896|Mus musculus domesticus DNA, BAC clone: B6Ng01-107G18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaagaagaaactgataaatttatgatcggtatgagaaagtctac
ccccttttccctgaaattgttactgcattaaaaaaaaaaaaaagtactta
tgacagagaaatttgtatgaaatggtagcaaacttgatctgtcagatagg
aggagaattgtgcggtgagcaaggagaggtatgcattctttccaacgaaa
taaggaagctttacaaataaacagtcttgcaggtagataccacagaagcc
tgataagttccagcgctcatgacttccaaacagtacgtgcagtaggcagt
gcaactagactacaaactgacgaactggaaaaaacataacacctttcaat
agcacttctaaattaaattactcaaataaatacaactaaagccgaagatg
tagctcagtactagagcttgcccagtatgccctaggtttcatcctcagaa
tctacaattaacaaacaaatgaatagataaataaaattaaaacattaatg
acaaaaaagttgatagttggggctaaaggcgggtaattagttgtaaaata
aactgattatagttcctcttacatttattaacaaaacaacagaagaaact
ccagtgggacaatagaagcagaaggattaaaactccaaggtcatctactc
tgtagttcaaggtcaacatggactaaaagaaatacatatgcatataaaga
atgaattaatgaatgtaaatgttatactactcaagaaagcgaagctcaag
tctcagaggaagaaatgctgtcagaaggattagattataagtgtttttag
aagtggacaagagcagtgagaacaggattgtctgtcaagagctgggatgc
tggactctcatcttgcctgttactgactcatactgtagaaagaaagggtg
tcaatcccaggcccttctgctctctatcctagcagttgctccaaggccca
agttctctgaagacttcacatctgaatctttaagtacgagaagctgggag
gagatactctgctgacgacacaatcggaatgcacgaatgccactgagtgt
tattctatgacgattgattgattggagatacaaagattgttatttggatg
gattcacacacaaccaaacacccacaatttttgttttcttggaatggact
tctctctgtagtctggctgc
ttatattgagttatgtattttggatatcaggcttctgttggatggagtgt
tagtgtagatcttgtcccattcttcaggctgccattctgtccttttgatg
gtggcttacaaaagatttttagtttcatgaggtcctatgaggttaattta
ttataaattaaaaatgatttattattgatcttaatgcttgaggtcttggt
gttctgtttagaaagttgtcccatatatatatatatatatatatatatat
atatatatatatatatatatatatatatatatatatatatctatcatcat
atatagtatatctggttatatgttgaaatctataatctatgggattttat
atatatggaaagggatataaatatatatctatatgcattcatctacaaac
agatatccagtttgatcaacactatgtgtggaagatgcttacctatttac
aaccacccacatacggacactcacacaaaaataagtatgtggattatttc
atgtctttatattcaattcccttgatcaacctgtctgtttttatgtgaat
ggcatgcacgtgcgttac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_48116753_48117941
seq2: B6Ng01-107G18.b_46_1215

seq1  GAATTCCAAGAAGAAACTGATAAATTTATGATCGGTATGAGAAAGTCTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGAAGAAACTGATAAATTTATGATCGGTATGAGAAAGTCTAC  50

seq1  CCCCTTTTCCCTGAAATTGTTACTGCATTAAAAAAAAAAAAAAGTACTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTTTCCCTGAAATTGTTACTGCATTAAAAAAAAAAAAAAGTACTTA  100

seq1  TGACAGAGAAATTTGTATGAAATGGTAGCAAACTTGATCTGTCAGATAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGAGAAATTTGTATGAAATGGTAGCAAACTTGATCTGTCAGATAGG  150

seq1  AGGAGAATTGTGCGGTGAGCAAGGAGAGGTATGCATTCTTTCCAACGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAATTGTGCGGTGAGCAAGGAGAGGTATGCATTCTTTCCAACGAAA  200

seq1  TAAGGAAGCTTTACAAATAAACAGTCTTGCAGGTAGATACCACAGAAGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAAGCTTTACAAATAAACAGTCTTGCAGGTAGATACCACAGAAGCC  250

seq1  TGATAAGTTCCAGCGCTCATGACTTCCAAACAGTACGTGCAGTAGGCAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAGTTCCAGCGCTCATGACTTCCAAACAGTACGTGCAGTAGGCAGT  300

seq1  GCAACTAGACTACAAACTGACGAACTGGAAAAAACATAACACCTTTCAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTAGACTACAAACTGACGAACTGGAAAAAACATAACACCTTTCAAT  350

seq1  AGCACTTCTAAATTAAATTACTCAAATAAATACAACTAAAGCCGAAGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTTCTAAATTAAATTACTCAAATAAATACAACTAAAGCCGAAGATG  400

seq1  TAGCTCAGTACTAGAGCTTGCCCAGTATGCCCTAGGTTTCATCCTCAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCAGTACTAGAGCTTGCCCAGTATGCCCTAGGTTTCATCCTCAGAA  450

seq1  TCTACAATTAACAAACAAATGAATAGATAAATAAAATTAAAACATTAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAATTAACAAACAAATGAATAGATAAATAAAATTAAAACATTAATG  500

seq1  ACAAAAAAGTTGATAGTTGGGGCTAAAGGCGGGTAATTAGTTGTAAAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAAAGTTGATAGTTGGGGCTAAAGGCGGGTAATTAGTTGTAAAATA  550

seq1  AACTGATTATAGTTCCTCTTACATTTATTAACAAAACAACAGAAGAAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGATTATAGTTCCTCTTACATTTATTAACAAAACAACAGAAGAAACT  600

seq1  CCAGTGGGACAATAGAAGCAGAAGGATTAAAACTCCAAGGTCATCTACTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGGGACAATAGAAGCAGAAGGATTAAAACTCCAAGGTCATCTACTC  650

seq1  TGTAGTTCAAGGTCAACATGGACTAAAAGAAATACATATGCATATAAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTTCAAGGTCAACATGGACTAAAAGAAATACATATGCATATAAAGA  700

seq1  ATGAATTAATGAATGTAAATGTTATACTACTCAAGAAAGCGAAGCTCAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATTAATGAATGTAAATGTTATACTACTCAAGAAAGCGAAGCTCAAG  750

seq1  TCTCAGAGGAAGAAATGCTGTCAGAAGGATTAGATTATAAGTGTTTTTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGAGGAAGAAATGCTGTCAGAAGGATTAGATTATAAGTGTTTTTAG  800

seq1  AAGTGGACAAGAGCAGTGAGAACAGGATTGTCTGTCAAGAGCTGGGATGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGACAAGAGCAGTGAGAACAGGATTGTCTGTCAAGAGCTGGGATGC  850

seq1  TGGACTCTCATCTTGCCTGTTACTGACTCATACTGTAGAAAGAAAGGGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTCTCATCTTGCCTGTTACTGACTCATACTGTAGAAAGAAAGGGTG  900

seq1  TCAATCCCAGGCCCTTCTGCTCTCTATCCTAGCAGTTGCTCCAAGGCCCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCCCAGGCCCTTCTGCTCTCTATCCTAGCAGTTGCTCCAAGGCCCA  950

seq1  AGTTCTCTGAAGACTTCACATCTGAATCTTTAAGTACGAGAAGCTGGGAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTCTGAAGACTTCACATCTGAATCTTTAAGTACGAGAAGCTGGGAG  1000

seq1  GAGATACTTCTGCTGACGACACAATCGGAATGCACGGAATGGCCACTGAG  1050
      ||||||| ||||||||||||||||||||||||||| |||| |||||||||
seq2  GAGATAC-TCTGCTGACGACACAATCGGAATGCAC-GAAT-GCCACTGAG  1047

seq1  GTGGTTATTCTTAATGACCGATTTGATTGGATTGAGAGATACATAGATTG  1100
         ||||||||  |||| ||| |||||| ||||| |||||||| ||||||
seq2  --TGTTATTCT--ATGA-CGA-TTGATT-GATTG-GAGATACAAAGATTG  1089

seq1  TTTATTTGGATTGGGATTCACACACAAACACAAACACACACCATTTTTTG  1150
       ||||||||||  ||||||||||||||   ||||||| || || ||||||
seq2  -TTATTTGGAT--GGATTCACACACAA--CCAAACACCCA-CAATTTTTG  1133

seq1  TTTTCTTGAGATAGGACTTCTCTCTGTAGTCCTGGCTGC  1189
      |||||||| ||  ||||||||||||||||| ||||||||
seq2  TTTTCTTG-GAATGGACTTCTCTCTGTAGT-CTGGCTGC  1170