BAC Information

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BAC

Clone NameB6Ng01-109L02
Chromosome7 (Build37)
Map Location 3,046,304 - 3,149,355
singlet/doubletdoublet
Overlap geneLOC100041028, LOC627003, EG664817, Speer9-ps1
Upstream genenone
Downstream geneAU018091, LOC100041503, Nlrp12, GA_x5J8B7W3939-136239-135295, LOC384710, Myadm, Prkcc, Cacng7, LOC672553, Cacng8, Cacng6, LOC100041095, 9930022N03Rik, LOC100041109, Oscar, Ndufa3, Tfpt, Prpf31, Cnot3, Leng1, Tmc4, Leng4, Tsen34, Rps9, Lilrb3, Pira1, LOC100041137, LOC100041146, Pira2, LOC675749, LOC100038908, LOC100038909, Pira11, Pira3, LOC100041186, LOC664841, Lair1, Ttyh1, Leng8, Leng9, Cdc42ep5, LOC384521
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-109L02.bB6Ng01-109L02.g
ACCDH916534DH916535
length9781,125
definitionDH916534|Mus musculus domesticus DNA, BAC clone: B6Ng01-109L02, 5' end.DH916535|Mus musculus domesticus DNA, BAC clone: B6Ng01-109L02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(3,148,791 - 3,149,355)(3,046,304 - 3,047,425)
sequence
gaattcatgttaaagccaaatgagagaggacactaattactgtggcagtg
actctctgctccagtaagtgtagtggttattcctggttgtcaactacaat
ccagaattggaaggcttaccagtgatcctaatctggaggctgggagatac
aagtttctgacttggatcttggcatggagatcttgaggcatagtggctat
gaattccagaagattaagactgggagatctctgagttcaaggtcatctgg
gattaaaggagtgatggcacacacctttaatctgggctacatcttctgct
ggaggacattggaagaaggaatatttactctttctcttcttcgactgctt
gccttgtgcaactgagcaactgatagatctttgaactcccattcacagca
gttgctgaccattgttgggagttggactacacactgtaagtcatcaatac
attctcttactatatagagactacctataagttctgtgattctagagaat
ccaagtaaacatgaagcagctggacatagatggacagacacattaaggtt
atagttaccacgatgaaacaccatgaccaacttgggaaagaaaaggatta
tttgggatacatttccacatcattactcataatagaaggaagtcaggaca
ggaatttcaagaagtgctagaactcagaggcaaaagcagatgcagaggct
aggaaggggttgctgcttattggcttgctcagcctgctttcttatagcat
ctaggagcccagggatggtaccaacctcaatgggctaggccctcccccat
caatcactaattaagaaaatgtttttacaggtttgcatacagcctgattt
cctttttcccctttttgaggcaggtttttctgtgtagccctgactattct
ggaattcactttgtagaccaggctgacctcaaactcacaagatttgggct
gcctctgcttcttgagtgctgggattaa
gaattctttggcttgcacacactcttttgagcatctgctgactgttgtat
gtttgttgtttcctacaggatatgatgtttcagcttctccaaggtctgga
cttttttcattctcacagagtagtgccttgcaatctgaaaccgcagaaca
ttctggtaaccagcagtggacagataaagcttgccatatctatagttttc
agatggcccttacctcggtagtaagtgatatcattgtcctggcattaaat
gtagttttcctgttttaattgacaaactgccctcttcgtgatcctcctgc
tgtttctgctcacacttagtctgtgaacggaatgtctgtgtgcttttttc
actagctttggctaagaggaaagtaagggccttgcttactatgacctcag
atgcatctgactgggtttgttatggatgggaaccaatcacagaaatagcc
tgttggcaccttagccactagggaggagtcagttagacatttctaaatga
gttttgctataacctggctttttaagttgcatacataatgtggaagggca
ggaggagtgccacctgtgttctgtggtgtaacttgagaaacagccacacc
attggcccaggcaggccagataacacactcttcagaaactgtgatgcttc
agggactagagaaatgaactgaaatgacctgagtgactaccacttccgag
cccaatggaagcatcatgggccagattacagaggatctgaggccctgttt
tgggagagaacttaagtcctcctgttctttgtcttattcagatccatggc
cataataagccttaccattaattaactccagttttgtctttatagtccat
ctggcagcagtctacagaatctaagaggagcacccaggtagtcagtatca
ttaattctttttcttatacctgctttgtatgtagtaaattgtgtgagtag
ctagaagtgaatgaaagctgcccacagacatagcgagttaaaacttagga
gaaaaaaaatcaacttcagcctcaaatatgctctgaaaccagacacctgg
cctggatgggtcccttgtggaaatgtgagggtggtactgctggccatggt
agtgagggaatgaagaatggctgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_3148791_3149355
seq2: B6Ng01-109L02.b_50_614 (reverse)

seq1  CATCGTGGTAACTATAACCTTAATGTGTCTGTCCATCTATGTCCAGCTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCGTGGTAACTATAACCTTAATGTGTCTGTCCATCTATGTCCAGCTGC  50

seq1  TTCATGTTTACTTGGATTCTCTAGAATCACAGAACTTATAGGTAGTCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGTTTACTTGGATTCTCTAGAATCACAGAACTTATAGGTAGTCTCT  100

seq1  ATATAGTAAGAGAATGTATTGATGACTTACAGTGTGTAGTCCAACTCCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGTAAGAGAATGTATTGATGACTTACAGTGTGTAGTCCAACTCCCA  150

seq1  ACAATGGTCAGCAACTGCTGTGAATGGGAGTTCAAAGATCTATCAGTTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGGTCAGCAACTGCTGTGAATGGGAGTTCAAAGATCTATCAGTTGC  200

seq1  TCAGTTGCACAAGGCAAGCAGTCGAAGAAGAGAAAGAGTAAATATTCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTGCACAAGGCAAGCAGTCGAAGAAGAGAAAGAGTAAATATTCCTT  250

seq1  CTTCCAATGTCCTCCAGCAGAAGATGTAGCCCAGATTAAAGGTGTGTGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAATGTCCTCCAGCAGAAGATGTAGCCCAGATTAAAGGTGTGTGCC  300

seq1  ATCACTCCTTTAATCCCAGATGACCTTGAACTCAGAGATCTCCCAGTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTCCTTTAATCCCAGATGACCTTGAACTCAGAGATCTCCCAGTCTT  350

seq1  AATCTTCTGGAATTCATAGCCACTATGCCTCAAGATCTCCATGCCAAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTCTGGAATTCATAGCCACTATGCCTCAAGATCTCCATGCCAAGAT  400

seq1  CCAAGTCAGAAACTTGTATCTCCCAGCCTCCAGATTAGGATCACTGGTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTCAGAAACTTGTATCTCCCAGCCTCCAGATTAGGATCACTGGTAA  450

seq1  GCCTTCCAATTCTGGATTGTAGTTGACAACCAGGAATAACCACTACACTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCCAATTCTGGATTGTAGTTGACAACCAGGAATAACCACTACACTT  500

seq1  ACTGGAGCAGAGAGTCACTGCCACAGTAATTAGTGTCCTCTCTCATTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAGCAGAGAGTCACTGCCACAGTAATTAGTGTCCTCTCTCATTTGG  550

seq1  CTTTAACATGAATTC  565
      |||||||||||||||
seq2  CTTTAACATGAATTC  565

seq1: chr7_3046304_3047425
seq2: B6Ng01-109L02.g_65_1189

seq1  GAATTCTTTGGCTTGCACACACTCTTTTGAGCATCTGCTGACTGTTGTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGGCTTGCACACACTCTTTTGAGCATCTGCTGACTGTTGTAT  50

seq1  GTTTGTTGTTTCCTACAGGATATGATGTTTCAGCTTCTCCAAGGTCTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTGTTTCCTACAGGATATGATGTTTCAGCTTCTCCAAGGTCTGGA  100

seq1  CTTTTTTCATTCTCACAGAGTAGTGCCTTGCAATCTGAAACCGCAGAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTCATTCTCACAGAGTAGTGCCTTGCAATCTGAAACCGCAGAACA  150

seq1  TTCTGGTAACCAGCAGTGGACAGATAAAGCTTGCCATATCTATAGTTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGTAACCAGCAGTGGACAGATAAAGCTTGCCATATCTATAGTTTTC  200

seq1  AGATGGCCCTTACCTCGGTAGTAAGTGATATCATTGTCCTGGCATTAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGCCCTTACCTCGGTAGTAAGTGATATCATTGTCCTGGCATTAAAT  250

seq1  GTAGTTTTCCTGTTTTAATTGACAAACTGCCCTCTTCGTGATCCTCCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTTTCCTGTTTTAATTGACAAACTGCCCTCTTCGTGATCCTCCTGC  300

seq1  TGTTTCTGCTCACACTTAGTCTGTGAACGGAATGTCTGTGTGCTTTTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTGCTCACACTTAGTCTGTGAACGGAATGTCTGTGTGCTTTTTTC  350

seq1  ACTAGCTTTGGCTAAGAGGAAAGTAAGGGCCTTGCTTACTATGACCTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGCTTTGGCTAAGAGGAAAGTAAGGGCCTTGCTTACTATGACCTCAG  400

seq1  ATGCATCTGACTGGGTTTGTTATGGATGGGAACCAATCACAGAAATAGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATCTGACTGGGTTTGTTATGGATGGGAACCAATCACAGAAATAGCC  450

seq1  TGTTGGCACCTTAGCCACTAGGGAGGAGTCAGTTAGACATTTCTAAATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGCACCTTAGCCACTAGGGAGGAGTCAGTTAGACATTTCTAAATGA  500

seq1  GTTTTGCTATAACCTGGCTTTTTAAGTTGCATACATAATGTGGAAGGGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGCTATAACCTGGCTTTTTAAGTTGCATACATAATGTGGAAGGGCA  550

seq1  GGAGGAGTGCCACCTGTGTTCTGTGGTGTAACTTGAGAAACAGCCACACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAGTGCCACCTGTGTTCTGTGGTGTAACTTGAGAAACAGCCACACC  600

seq1  ATTGGCCCAGGCAGGCCAGATAACACACTCTTCAGAAACTGTGATGCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCCCAGGCAGGCCAGATAACACACTCTTCAGAAACTGTGATGCTTC  650

seq1  AGGGACTAGAGAAATGAACTGAAATGACCTGAGTGACTACCACTTCCGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACTAGAGAAATGAACTGAAATGACCTGAGTGACTACCACTTCCGAG  700

seq1  CCCAATGGAAGCATCATGGGCCAGATTACAGAGGATCTGAGGCCCTGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAATGGAAGCATCATGGGCCAGATTACAGAGGATCTGAGGCCCTGTTT  750

seq1  TGGGAGAGAACTTAAGTCCTCCTGTTCTTTGTCTTATTCAGATCCATGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGAGAACTTAAGTCCTCCTGTTCTTTGTCTTATTCAGATCCATGGC  800

seq1  CATAATAAGCCTTACCATTAATTAACTCCAG-TTTGTCTTTATAGTCCAT  849
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CATAATAAGCCTTACCATTAATTAACTCCAGTTTTGTCTTTATAGTCCAT  850

seq1  CTGGCAGCAGTCTACAGAATCTAAGAGGAGCACCCAGGTAGTCAGTATCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCAGCAGTCTACAGAATCTAAGAGGAGCACCCAGGTAGTCAGTATCA  900

seq1  ATAATTC-TTTTCTTATAACCTGCTTTGTATGTAGTAAA-TGTGTGAGTA  947
       |||||| ||||||||| ||||||||||||||||||||| ||||||||||
seq2  TTAATTCTTTTTCTTAT-ACCTGCTTTGTATGTAGTAAATTGTGTGAGTA  949

seq1  GCTAGAAGTGAAGGAAAGCTGCCCACAGACATAGCGAGTTAAAACTTAGG  997
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GCTAGAAGTGAATGAAAGCTGCCCACAGACATAGCGAGTTAAAACTTAGG  999

seq1  AGAAAAAAATCCAACTTCAGCCTCAAAGAGGCTCTGAAACCAGACA-CTG  1046
      |||||||||  |||||||||||||||| | |||||||||||||||| |||
seq2  AGAAAAAAAATCAACTTCAGCCTCAAATATGCTCTGAAACCAGACACCTG  1049

seq1  GCCTGGATGGGGTCCCTTGTTGGGAAATGTGA-GGTGGTACTGTTGGCCA  1095
      |||||||| |||||||||||  |||||||||| |||||||||| ||||||
seq2  GCCTGGAT-GGGTCCCTTGT--GGAAATGTGAGGGTGGTACTGCTGGCCA  1096

seq1  TTGTAGTGAGGGAATGA--GATGGCTGCT  1122
      | |||||||||||||||   |||||||||
seq2  TGGTAGTGAGGGAATGAAGAATGGCTGCT  1125