BAC Information

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BAC

Clone NameB6Ng01-110C06
Chromosome7 (Build37)
Map Location 72,835,947 - 73,005,865
singlet/doubletdoublet
Overlap geneTarsl2, Tm2d3, LOC665241
Upstream geneApba2, 5730507A09Rik, Ndnl2, Tjp1, Gm1693, EG665234
Downstream genePcsk6, Snrpa1, H47, Chsy1, Lrrk1, Aldh1a3, Asb7, Lins2, Lass3, Adamts17
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-110C06.bB6Ng01-110C06.g
ACCDH916849DH916850
length1,1811,086
definitionDH916849|Mus musculus domesticus DNA, BAC clone: B6Ng01-110C06, 5' end.DH916850|Mus musculus domesticus DNA, BAC clone: B6Ng01-110C06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,835,947 - 72,837,125)(73,004,766 - 73,005,865)
sequence
gaattcagtaagcagtattgaggagaaactcgggtgtgtatcaaatgacg
ttaacttatggcaggtaaatcactcatttaaaaatgtttatttctctttc
atttctacagtggttggcgaaaaggaaaagatcaacaatgcagtaaatgt
tcgaacaagagacaacaaaattcatggagaaatatcaatagcttccgtca
ttgaaaaattgaagaacctcaaaaaatcacgtacgctaaatgccgaggaa
gacttctgaaggcttctccttgggcttctatataaccttgttttgacttc
tgaaatgtattttccctgtcacttaagatattagtacttctaagaaccct
agggccacttgtagggctctaatgagttcaacctaagaaggaaaagtgat
tatttgatataaacaaaattttaatttgttgtgttctgagactaaatagg
agaagctggagaaatttgcaagctatcaagactccagagacctcagtgat
aaaatggtgtccattcaaagaggggaacactagcgagaattatcagaaat
catgctttgtttctttctcaaaagatgtgcttccagcctgggggctgtag
cttcgtgaccagagcatccgcgttgcatgtatgaggcctgagctccatcc
ccagcagccaccacctctcacccaacaatgacaggaataggctttcaata
aaagcccatggcccttttgtaacatggaggggagatgtcttattttctaa
tacacacatctcatgtatttttatggctgctttactaaagttcacactga
aactcatgcccaaagctggaattgctatttcatttagtgtgcaatcataa
gagaagtactaatatcctgttagtggcaaaggactatgaaacctcaaaga
gattttgtacaatctgttatttgcattgtgagttaagagttacagtttaa
tgcttctaatcataattcattatatttatctttaggaaacactaaagtcc
taaataaaatgcatcacatgtgttttctagagcctcggtatgttccattg
ttggacgccttgcctggagttgaccactgctttcctggggggttccactt
gatagttgaatcgagtatatttctgatttttttttttttattcaagactg
ggtttccagatggtagttttctggctggcct
gaattcacttgcctgagtctatagccaggcagatcagacagacagacatg
ctaggggatacaggagagagagagagagacagagagacagagagacagag
agagagagacagagagagagacagagggccaactgaagtcttttccaaca
tccctctcaggagtccttgggtttttttttttttttacctcagatgatcc
atcctttctataagcatgagtcaccttaatgaaggtagaaggagaggaca
gttggtggggggcccaaccaggacatgccaaattcatgccaacagagctc
ctaccacaaataccttttgtgtgcctctgttgtccctggccaaggggagt
cagctctctgggcagtaactcaagatcccctctttgttgcagaagttgac
gccctgggacaaggcctggttccccctgcctgacagaaagatctaaggtc
atcatacaaagtggccagccctagagaacactacacttatgttgggcaaa
gacagcatccagacccttcagcctgcctctgttcagtcaagcagagaagc
tgatggacagaggagagtggaggcaggggattcagtctgttctgttcctt
tccagcagtccacatggacaatctgagtcccctttctggccttcgtgggc
caacctgtctttgactcatcccagatcctgtgctatgcttcaagagcatg
acctgcgtgaagaccctgcggtgcacatactctagatgatgtggagcact
tcgtattcccaagagggtacccctgttacagcagttatccagacaggccg
atatgtgggttttctgtaataatttggtagatgaagggaatcagtctact
gaactatttagaggaggctaaacacatctgaattttgtatttggaggggg
tcagggtatattttgtaacaaggctgatcactgggactaaacctcctgct
tgttttagacgtacctgggccacagaacgctgtaggaagaccagcttgca
atgaacatcctaaatcaattgctgctgtggagttcaatggatttacacgg
tgactgataactcattcaaaaagtccagccctctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_72835947_72837125
seq2: B6Ng01-110C06.b_48_1228

seq1  GAATTCAGTAAGCAGTATTGAGGAGAAACTCGGGTGTGTATCAAATGACG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAAGCAGTATTGAGGAGAAACTCGGGTGTGTATCAAATGACG  50

seq1  TTAACTTATGGCAGGTAAATCACTCATTTAAAAATGTTTATTTCTCTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTTATGGCAGGTAAATCACTCATTTAAAAATGTTTATTTCTCTTTC  100

seq1  ATTTCTACAGTGGTTGGCGAAAAGGAAAAGATCAACAATGCAGTAAATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTACAGTGGTTGGCGAAAAGGAAAAGATCAACAATGCAGTAAATGT  150

seq1  TCGAACAAGAGACAACAAAATTCATGGAGAAATATCAATAGCTTCCGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAACAAGAGACAACAAAATTCATGGAGAAATATCAATAGCTTCCGTCA  200

seq1  TTGAAAAATTGAAGAACCTCAAAAAATCACGTACGCTAAATGCCGAGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAAATTGAAGAACCTCAAAAAATCACGTACGCTAAATGCCGAGGAA  250

seq1  GACTTCTGAAGGCTTCTCCTTGGGCTTCTATATAACCTTGTTTTGACTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCTGAAGGCTTCTCCTTGGGCTTCTATATAACCTTGTTTTGACTTC  300

seq1  TGAAATGTATTTTCCCTGTCACTTAAGATATTAGTACTTCTAAGAACCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATGTATTTTCCCTGTCACTTAAGATATTAGTACTTCTAAGAACCCT  350

seq1  AGGGCCACTTGTAGGGCTCTAATGAGTTCAACCTAAGAAGGAAAAGTGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCCACTTGTAGGGCTCTAATGAGTTCAACCTAAGAAGGAAAAGTGAT  400

seq1  TATTTGATATAAACAAAATTTTAATTTGTTGTGTTCTGAGACTAAATAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGATATAAACAAAATTTTAATTTGTTGTGTTCTGAGACTAAATAGG  450

seq1  AGAAGCTGGAGAAATTTGCAAGCTATCAAGACTCCAGAGACCTCAGTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCTGGAGAAATTTGCAAGCTATCAAGACTCCAGAGACCTCAGTGAT  500

seq1  AAAATGGTGTCCATTCAAAGAGGGGAACACTAGCGAGAATTATCAGAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGGTGTCCATTCAAAGAGGGGAACACTAGCGAGAATTATCAGAAAT  550

seq1  CATGCTTTGTTTCTTTCTCAAAAGATGTGCTTCCAGCCTGGGGGCTGTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTTTGTTTCTTTCTCAAAAGATGTGCTTCCAGCCTGGGGGCTGTAG  600

seq1  CTTCGTGACCAGAGCATCCGCGTTGCATGTATGAGGCCTGAGCTCCATCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCGTGACCAGAGCATCCGCGTTGCATGTATGAGGCCTGAGCTCCATCC  650

seq1  CCAGCAGCCACCACCTCTCACCCAACAATGACAGGAATAGGCTTTCAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAGCCACCACCTCTCACCCAACAATGACAGGAATAGGCTTTCAATA  700

seq1  AAAGCCCATGGCCCTTTTGTAACATGGAGGGGAGATGTCTTATTTTCTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCCATGGCCCTTTTGTAACATGGAGGGGAGATGTCTTATTTTCTAA  750

seq1  TACACACATCTCAGGTATTTTTATGGCTGCTTTACTAAAGTTCACACTGA  800
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TACACACATCTCATGTATTTTTATGGCTGCTTTACTAAAGTTCACACTGA  800

seq1  AACTCATGCCCAAAGCTGGAATTGCTATTTCATTTAGTGTGCAATCATAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCATGCCCAAAGCTGGAATTGCTATTTCATTTAGTGTGCAATCATAA  850

seq1  GAGAAGTACTAATATCCTGTTAGTGGCAAAGGACTATGAAACCTCAAAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGTACTAATATCCTGTTAGTGGCAAAGGACTATGAAACCTCAAAGA  900

seq1  GATTTTGTACAATCTGTTATTTGCATTGTGAGTTAAGAGTTACAGTTTTA  950
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GATTTTGTACAATCTGTTATTTGCATTGTGAGTTAAGAGTTACAG-TTTA  949

seq1  ATGCTTCTAATCATAATTCATTATATTTATCTTTA-GAAACACTAAAGTC  999
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ATGCTTCTAATCATAATTCATTATATTTATCTTTAGGAAACACTAAAGTC  999

seq1  CTAAATAAAATGCATCACATGGTGTTTCTAGAGCCTCGGTATGTTCCATT  1049
      |||||||||||||||||||||   ||||||||||||||||||||||||||
seq2  CTAAATAAAATGCATCACATGTGTTTTCTAGAGCCTCGGTATGTTCCATT  1049

seq1  GTTGGACG-CTTGCCTGGAGTTGAACCACTGCTTTCCTGGGGTGTTTCAC  1098
      |||||||| |||||||||||||| |||||||||||||||||| ||| |||
seq2  GTTGGACGCCTTGCCTGGAGTTG-ACCACTGCTTTCCTGGGGGGTTCCAC  1098

seq1  TTGTATGTTGAATCGAGTATATTTCTGATTTTTTTTTTTTTAAATCAAGA  1148
      |||   ||||||||||||||||||||||||||||||||||| | ||||||
seq2  TTGATAGTTGAATCGAGTATATTTCTGATTTTTTTTTTTTT-ATTCAAGA  1147

seq1  CTGGGTTTCACGAT-GTAG--TTCTGGCTGGCCT  1179
      |||||||||  ||| ||||  |||||||||||||
seq2  CTGGGTTTCCAGATGGTAGTTTTCTGGCTGGCCT  1181

seq1: chr7_73004766_73005865
seq2: B6Ng01-110C06.g_67_1152 (reverse)

seq1  TCAGAGGGCTGGGACTTTTGTGATTGAGTTAATCCTGTCACCGTGTAAAT  50
      |||||||||| |||||||| ||| |||||||   | ||||||||||||||
seq2  TCAGAGGGCT-GGACTTTT-TGAATGAGTTA--TCAGTCACCGTGTAAAT  46

seq1  CAATTGGAAACT-CACAGGCAGCAATTTGATTTAGGATGTTCATTTTGGC  99
      | ||||  |||| |||| ||||||| |||||||||||||||||||   ||
seq2  CCATTG--AACTCCACA-GCAGCAA-TTGATTTAGGATGTTCATT---GC  89

seq1  AAGCTGGTCTTCCTACAGCCGTTCTGTGGCCCAGGTACGTCTACAACAAG  149
      |||||||||||||||||| |||||||||||||||||||||||| ||||||
seq2  AAGCTGGTCTTCCTACAG-CGTTCTGTGGCCCAGGTACGTCTAAAACAAG  138

seq1  CAGGAGGTTTAGTCCCAGTGGATCAGCCTTGTTAACAAAATATACCCTGA  199
      ||||||||||||||||||| ||||||||||||| ||||||||||||||||
seq2  CAGGAGGTTTAGTCCCAGT-GATCAGCCTTGTT-ACAAAATATACCCTGA  186

seq1  CCCCCTCCAAATACAAAATTCAGATGTGTTTTAGCCTCCTCTAAATAGTT  249
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CCCCCTCCAAATACAAAATTCAGATGTG-TTTAGCCTCCTCTAAATAGTT  235

seq1  CAGTAGACTGATTCCCTTCATCTACCAAATTATTACAGAAAACCCACATA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGACTGATTCCCTTCATCTACCAAATTATTACAGAAAACCCACATA  285

seq1  TCGGCCTGTCTGGATAACTGCTGTAACAGGGGTACCCTCTTGGGAATACG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGCCTGTCTGGATAACTGCTGTAACAGGGGTACCCTCTTGGGAATACG  335

seq1  AAGTGCTCCACATCATCTAGAGTATGTGCACCGCAGGGTCTTCACGCAGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCTCCACATCATCTAGAGTATGTGCACCGCAGGGTCTTCACGCAGG  385

seq1  TCATGCTCTTGAAGCATAGCACAGGATCTGGGATGAGTCAAAGACAGGTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCTCTTGAAGCATAGCACAGGATCTGGGATGAGTCAAAGACAGGTT  435

seq1  GGCCCACGAAGGCCAGAAAGGGGACTCAGATTGTCCATGTGGACTGCTGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCACGAAGGCCAGAAAGGGGACTCAGATTGTCCATGTGGACTGCTGG  485

seq1  AAAGGAACAGAACAGACTGAATCCCCTGCCTCCACTCTCCTCTGTCCATC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAACAGAACAGACTGAATCCCCTGCCTCCACTCTCCTCTGTCCATC  535

seq1  AGCTTCTCTGCTTGACTGAACAGAGGCAGGCTGAAGGGTCTGGATGCTGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCTCTGCTTGACTGAACAGAGGCAGGCTGAAGGGTCTGGATGCTGT  585

seq1  CTTTGCCCAACATAAGTGTAGTGTTCTCTAGGGCTGGCCACTTTGTATGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCCCAACATAAGTGTAGTGTTCTCTAGGGCTGGCCACTTTGTATGA  635

seq1  TGACCTTAGATCTTTCTGTCAGGCAGGGGGAACCAGGCCTTGTCCCAGGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTTAGATCTTTCTGTCAGGCAGGGGGAACCAGGCCTTGTCCCAGGG  685

seq1  CGTCAACTTCTGCAACAAAGAGGGGATCTTGAGTTACTGCCCAGAGAGCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCAACTTCTGCAACAAAGAGGGGATCTTGAGTTACTGCCCAGAGAGCT  735

seq1  GACTCCCCTTGGCCAGGGACAACAGAGGCACACAAAAGGTATTTGTGGTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCCCTTGGCCAGGGACAACAGAGGCACACAAAAGGTATTTGTGGTA  785

seq1  GGAGCTCTGTTGGCATGAATTTGGCATGTCCTGGTTGGGCCCCCCACCAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTCTGTTGGCATGAATTTGGCATGTCCTGGTTGGGCCCCCCACCAA  835

seq1  CTGTCCTCTCCTTCTACCTTCATTAAGGTGACTCATGCTTATAGAAAGGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCTCTCCTTCTACCTTCATTAAGGTGACTCATGCTTATAGAAAGGA  885

seq1  TGGATCATCTGAGGTAAAAAAAAAAAAAAACCCAAGGACTCCTGAGAGGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCATCTGAGGTAAAAAAAAAAAAAAACCCAAGGACTCCTGAGAGGG  935

seq1  ATGTTGGAAAAGACTTCAGTTGGCCCTCTGTCTCTCTCTCTGTCTCTCTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGGAAAAGACTTCAGTTGGCCCTCTGTCTCTCTCTCTGTCTCTCTC  985

seq1  TCTCTGTCTCTCTGTCTCTCTGTCTCTCTCTCTCTCTCCTGTATCCCCTA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTCTCTCTGTCTCTCTGTCTCTCTCTCTCTCTCCTGTATCCCCTA  1035

seq1  GCATGTCTGTCTGTCTGATCTGCCTGGCTATAGACTCAGGCAAGTGAATT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTCTGTCTGTCTGATCTGCCTGGCTATAGACTCAGGCAAGTGAATT  1085

seq1  C  1100
      |
seq2  C  1086