BAC Information

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BAC

Clone NameB6Ng01-110J08
Chromosome7 (Build37)
Map Location 25,473,631 - 25,630,694
singlet/doubletdoublet
Overlap geneGm1096, BC049730, EG210155, Cd177, Ceacam10, EG545936
Upstream geneEG545934, V1rd22, LOC384573, EG622222, LOC546943, V1rd12, V1rd13, V1rd17, LOC100043121, V1rd16, LOC384575, V1rd20, V1rd18, V1rd15, EG622446, Zfp180, Zfp112, Zfp235, Zfp114, Zfp111, Zfp109, Zfp108, Zfp93, LOC100043690, Zfp61, LOC100043691, Zfp94, 1700008P20Rik, Lypd5, Kcnn4, 1500002O20Rik, Irgc1, Plaur, Cadm4, Zfp428, Irgq, 2310033E01Rik, Xrcc1, Zfp575, Ethe1, LOC100043138, EG232970, Lypd3, LOC100043706, Tex101
Downstream geneLOC100043712, Lypd4, Dmrtc2, Rps19, Cd79a, Arhgef1, EG232974, Rabac1, Atp1a3, Grik5, Zfp574, Pou2f2, Dedd2, Zfp526, Gsk3a, 9130221H12Rik, Erf, Cic, Pafah1b3, EG623131, Tmem145, Megf8, Cnfn, Lipe, BC024561, LOC434148, Ceacam1, Ceacam2, LOC100043722, EG632778, 2310004L02Rik, B3gnt8, Bckdha, Exosc5, A830041P22Rik, BC028440, Tgfb1, Ccdc97, Hnrpul1, Axl, LOC667950, Cyp2s1, LOC100043732
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-110J08.bB6Ng01-110J08.g
ACCDH917163DH917164
length711880
definitionDH917163|Mus musculus domesticus DNA, BAC clone: B6Ng01-110J08, 5' end.DH917164|Mus musculus domesticus DNA, BAC clone: B6Ng01-110J08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,473,631 - 25,474,341)(25,629,814 - 25,630,694)
sequence
gaattcctgactaaggcttcaatcagagggctcctggacccactgtctta
tgttccctagaactgtccctctctagaaaacaaggattagcaaggactaa
gtctggtggaattgactcctgcagtttatcagttcccaggtcctgatcag
ctcttcccagcctcagagaagccatgggagcctgccgcatccagtatgtc
ctgctcctctctctactgggcttctgcccctgctcaggtgaggatgcaga
agaagagcaactggcagtcatcatttgaatgtcagagtgcagtacacttc
ccttagtgtctcttcacagagtggaggagaaaacaattgcagtcgtggga
ggagggaactctgtgcaaaggcctgagaaggaccttgtgtctggtgacac
ccagctctcctacccacggttggaggccagcaccctgcccacattttcag
gcaggaaatcgaagatgaatgtcccttgttccatcatcaatattgggtgc
ccaccatattgtctgtcccctgtgttcctcatctccttgccttcctctga
gtagctctgtcagactagaatatgtgccatcctccttttctttttctttt
cttttcttttcttttcttttcttttcttttcttttcttttcttttctttc
ttttcttttcttttcttttcttttcctctctctctctctctctctctctc
tctctctctct
gaattctctttggaggccacttggcctccaactcacagagatccgcctgc
ctctgcctccccagtgctgggatcaaaggcgtgcaccaccactgcccagc
tgaaaaacacctcttaaaagattttagtgcaggcacccatgcaaggtaga
agagataagatggccggatatccaggagctggagttgtaggcggttgtga
gccttccgatgtggatgctgtgaaccttccgatgtggatgctgtgaacct
tccgatgtggatgctgtgaaccttccgatgtggatgccaggtctcctgtg
agagcagtgcgcatgctcttaactgttgagccatctctcaccagttctga
aaagcacctcttgtgtttggccattcttggcacagacaagcgcagggagg
acagaaacctaggcaagtttctaagttaccgtagcttcaggacttattgt
ttaaccaagatggtcactgcttaacattttccacttttatttttattagg
tagttggaagatgagatataatttttattttgtttttgtaacattttttt
gggggtgcgagggggctggacaaaggtaatgtcttcatcaggaggatctt
tggtatatgacatttcagagggagagaatacagtgagggagagcccccaa
gctcactagtatctgtctggctgcctaccattcttccttcaagagttggg
accctaaaatcatctaggagatagacatcgggtcactcacccttactttc
ctggctgagataggaaggcgaaagcttagggtctccccctttgctgagtt
tcagatatagagggtgaccaactaaatgctgtttagattgttacagacca
tctgagtgggatggtggatgggatggtggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_25473631_25474341
seq2: B6Ng01-110J08.b_41_751

seq1  GAATTCCTGACTAAGGCTTCAATCAGAGGGCTCCTGGACCCACTGTCTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGACTAAGGCTTCAATCAGAGGGCTCCTGGACCCACTGTCTTA  50

seq1  TGTTCCCTAGAACTGTCCCTCTCTAGAAAACAAGGATTAGCAAGGACTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCCTAGAACTGTCCCTCTCTAGAAAACAAGGATTAGCAAGGACTAA  100

seq1  GTCTGGTGGAATTGACTCCTGCAGTTTATCAGTTCCCAGGTCCTGATCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGTGGAATTGACTCCTGCAGTTTATCAGTTCCCAGGTCCTGATCAG  150

seq1  CTCTTCCCAGCCTCAGAGAAGCCATGGGAGCCTGCCGCATCCAGTATGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCCAGCCTCAGAGAAGCCATGGGAGCCTGCCGCATCCAGTATGTC  200

seq1  CTGCTCCTCTCTCTACTGGGCTTCTGCCCCTGCTCAGGTGAGGATGCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCCTCTCTCTACTGGGCTTCTGCCCCTGCTCAGGTGAGGATGCAGA  250

seq1  AGAAGAGCAACTGGCAGTCATCATTTGAATGTCAGAGTGCAGTACACTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGCAACTGGCAGTCATCATTTGAATGTCAGAGTGCAGTACACTTC  300

seq1  CCTTAGTGTCTCTTCACAGAGTGGAGGAGAAAACAATTGCAGTCGTGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGTGTCTCTTCACAGAGTGGAGGAGAAAACAATTGCAGTCGTGGGA  350

seq1  GGAGGGAACTCTGTGCAAAGGCCTGAGAAGGACCTTGTGTCTGGTGACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGAACTCTGTGCAAAGGCCTGAGAAGGACCTTGTGTCTGGTGACAC  400

seq1  CCAGCTCTCCTACCCACGGTTGGAGGCCAGCACCCTGCCCACATTTTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTCTCCTACCCACGGTTGGAGGCCAGCACCCTGCCCACATTTTCAG  450

seq1  GCAGGAAATCGAAGATGAATGTCCCTTGTTCCATCATCAATATTGGGTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAAATCGAAGATGAATGTCCCTTGTTCCATCATCAATATTGGGTGC  500

seq1  CCACCATATTGTCTGTCCCCTGTGTTCCTCATCTCCTTGCCTTCCTCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCATATTGTCTGTCCCCTGTGTTCCTCATCTCCTTGCCTTCCTCTGA  550

seq1  GTAGCTCTGTCAGACTAGAATATGTGCCATCCTCCTTTTCTTTTTCTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTCTGTCAGACTAGAATATGTGCCATCCTCCTTTTCTTTTTCTTTT  600

seq1  CTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTC  650

seq1  TTTTCTTTTCTTTTCTTTTCTTTTCCTCTCTCTCTCTCTCTCTCTCTCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTTCTTTTCTTTTCTTTTCCTCTCTCTCTCTCTCTCTCTCTCTC  700

seq1  TCTCTCTCTCT  711
      |||||||||||
seq2  TCTCTCTCTCT  711

seq1: chr7_25629814_25630694
seq2: B6Ng01-110J08.g_65_944 (reverse)

seq1  ACCACCATCCCATCCACCATCCCACTCAGATGGTCCTGTAACAATCTAAA  50
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ACCACCATCCCATCCACCATCCCACTCAGATGGT-CTGTAACAATCTAAA  49

seq1  CAGCATTTAGTTGGTCACCCTCTATATCTGAAACTCAGCAAAGGGGGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATTTAGTTGGTCACCCTCTATATCTGAAACTCAGCAAAGGGGGAGA  99

seq1  CCCTAAGCCTTCGCCTTCCTATCTCAGCCAGGAAAGTAAGGGTGAGTGAC  150
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAAGCTTTCGCCTTCCTATCTCAGCCAGGAAAGTAAGGGTGAGTGAC  149

seq1  CCGATGTCTATCTCCTAGATGATTTTAGGGTCCCAACTCTTGAAGGAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGATGTCTATCTCCTAGATGATTTTAGGGTCCCAACTCTTGAAGGAAGA  199

seq1  ATGGTAGGCAGCCAGACAGATACTAGTGAGCTTGGGGGCTCTCCCTCACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTAGGCAGCCAGACAGATACTAGTGAGCTTGGGGGCTCTCCCTCACT  249

seq1  GTATTCTCTCCCTCTGAAATGTCATATACCAAAGATCCTCCTGATGAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCTCTCCCTCTGAAATGTCATATACCAAAGATCCTCCTGATGAAGA  299

seq1  CATTACCTTTGTCCAGCCCCCTCGCACCCCCAAAAAAATGTTACAAAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACCTTTGTCCAGCCCCCTCGCACCCCCAAAAAAATGTTACAAAAAC  349

seq1  AAAATAAAAATTATATCTCATCTTCCAACTACCTAATAAAAATAAAAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAAATTATATCTCATCTTCCAACTACCTAATAAAAATAAAAGTG  399

seq1  GAAAATGTTAAGCAGTGACCATCTTGGTTAAACAATAAGTCCTGAAGCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGTTAAGCAGTGACCATCTTGGTTAAACAATAAGTCCTGAAGCTA  449

seq1  CGGTAACTTAGAAACTTGCCTAGGTTTCTGTCCTCCCTGCGCTTGTCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTAACTTAGAAACTTGCCTAGGTTTCTGTCCTCCCTGCGCTTGTCTGT  499

seq1  GCCAAGAATGGCCAAACACAAGAGGTGCTTTTCAGAACTGGTGAGAGATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGAATGGCCAAACACAAGAGGTGCTTTTCAGAACTGGTGAGAGATG  549

seq1  GCTCAACAGTTAAGAGCATGCGCACTGCTCTCACAGGAGACCTGGCATCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAACAGTTAAGAGCATGCGCACTGCTCTCACAGGAGACCTGGCATCC  599

seq1  ACATCGGAAGGTTCACAGCATCCACATCGGAAGGTTCACAGCATCCACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCGGAAGGTTCACAGCATCCACATCGGAAGGTTCACAGCATCCACAT  649

seq1  CGGAAGGTTCACAGCATCCACATCGGAAGGCTCACAACCGCCTACAACTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAAGGTTCACAGCATCCACATCGGAAGGCTCACAACCGCCTACAACTC  699

seq1  CAGCTCCTGGATATCCGGCCATCTTATCTCTTCTACCTTGCATGGGTGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCCTGGATATCCGGCCATCTTATCTCTTCTACCTTGCATGGGTGCC  749

seq1  TGCACTAAAATCTTTTAAGAGGTGTTTTTCAGCTGGGCAGTGGTGGTGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTAAAATCTTTTAAGAGGTGTTTTTCAGCTGGGCAGTGGTGGTGCA  799

seq1  CGCCTTTGATCCCAGCACTGGGGAGGCAGAGGCAGGCGGATCTCTGTGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTTTGATCCCAGCACTGGGGAGGCAGAGGCAGGCGGATCTCTGTGAG  849

seq1  TTGGAGGCCAAGTGGCCTCCAAAGAGAATTC  881
      |||||||||||||||||||||||||||||||
seq2  TTGGAGGCCAAGTGGCCTCCAAAGAGAATTC  880