BAC Information

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BAC

Clone NameB6Ng01-112C17
Chromosome7 (Build37)
Map Location 96,115,619 - 96,258,107
singlet/doubletdoublet
Overlap genenone
Upstream geneGrm5, Ctsc, LOC100039756, Rab38, LOC100039924, LOC666598, EG621562
Downstream geneTmem135, LOC100039969, Fzd4, Prss23, LOC100040001, Me3, Ccdc81, l7Rn6, Eed, E230029C05Rik, EG384719
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-112C17.bB6Ng01-112C17.g
ACCDH918308DH918309
length7981,154
definitionDH918308|Mus musculus domesticus DNA, BAC clone: B6Ng01-112C17, 5' end.DH918309|Mus musculus domesticus DNA, BAC clone: B6Ng01-112C17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(96,115,619 - 96,116,418)(96,256,948 - 96,258,107)
sequence
gaattccaagaatccattcactactctctttcttccttttaccccatatc
tcctttttagtagtcttgaatgtgtgtacattcttttctgcctccagaga
cagcctagggagtattcattacataaatatagtagaagttcaatgaatat
ctgctgattgaataattgacctgcttattaattcagtgccaaaagggaaa
gtttgcagataaagatgactttatacatatttcatagtttgctctctgtt
gctgtgataaataccatgatcaaaagcatcttggggagaaagaagtttat
ttggcttgcatatatatccctatcatggtctaacattgagggatgccaaa
gaaggacattaagcaaggcagaatcctagatacaggtatagggcatgaag
aaacactacctactgtgtctctctctccccctatgacatgctcatcctgc
tctcccatacagcccaagatggcactatgcagagtggacagagccctctt
acagcattcattgatcaagtaattaggacattttctcaattgacattccc
tctcctcagataactcaatttgcaccacactgacaaaaaaaaacaacaaa
aaaaacaaacaaacaaaaaacaaaacaaaacaaaaaacctataactacag
tactcttgtggttattgaataagtaaaatcaatttcaagtttactgtatt
tggggggtgggggttgcttatttgcttgcttgcttgcttgcttgcttgct
tgcttgcttgcttggaggttcttttagacaccaaataatgtgaataag
gaattcccattttctttatttttatacagcatatttgggaattggtgtgc
gatggaatatgctctgaggcatttctctatagaaattaatttcagtccag
atttgacaatctggttcacttgaaatatttgctgtcctttaatagatttc
tttattctagtcagcagagctattccttttcctataccccatgcattttg
cccactccttcagtcttcctattgctatctcctataagcaacccaccatt
tctttcatcaatcactgtctttccctccacagctcttagaatgtttagtg
cctcttcaggaaaatctctactttctgaaactcttaagaaaggaagtgtt
ccagaaaacaatattttctggcagtctatggggtaacaatttttaagatg
gaaatgttatttagcttaattttctaggacaaaacgccttagaaatatat
tgaataattcaacaaataattaaaaagagagtattaaatgcaattaagcc
tgatttttataacatgccactggggggaaatcattccataggaagatgag
aaaaaaaatcattttttttcaacctcagttctaccagtaatgaagtagga
accctgagaagtttgagcttctactctgctgtctaagaaaacatggtatt
ttgacagatgttcttcaaggtccctcacagctctaacactatgtctggga
tgttttgattgcagaagtctaggaaaagattcagtaaagggagacaaggt
gctcaattctatattagatttatatctgattatttcttgtttgaatacat
ataccagttactgcttaatagtgattacaataaagatttttcaaaaacat
gatagttgatgctagattctatttggttgacaaaattcctgtcttctcac
agcaacagattaagaatcaaaggtttctctaatcctgttaagtgcatttt
cttcttcatgactgagtctggcaagcctttgatcatggacttgggcagag
tattagtattttcatgccctcaggaaagcctcagctgtctaaggcattct
ccctcagagtctctcaaatctgattgatcacttttaattactttccggga
caaagctattgactctggagatgggaagggttctttacctcacgggaagt
catg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_96115619_96116418
seq2: B6Ng01-112C17.b_46_843

seq1  GAATTCCAAGAATCCATTCACTACTCTCTTTCTTCCTTTTACCCCATATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGAATCCATTCACTACTCTCTTTCTTCCTTTTACCCCATATC  50

seq1  TCCTTTTTAGTAGTCTTGAATGTGTGTACATTCTTTTCTGCCTCCAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTTAGTAGTCTTGAATGTGTGTACATTCTTTTCTGCCTCCAGAGA  100

seq1  CAGCCTAGGGAGTATTCATTACATAAATATAGTAGAAGTTCAATGAATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTAGGGAGTATTCATTACATAAATATAGTAGAAGTTCAATGAATAT  150

seq1  CTGCTGATTGAATAATTGACCTGCTTATTAATTCAGTGCCAAAAGGGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGATTGAATAATTGACCTGCTTATTAATTCAGTGCCAAAAGGGAAA  200

seq1  GTTTGCAGATAAAGATGACTTTATACATATTTCATAGTTTGCTCTCTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCAGATAAAGATGACTTTATACATATTTCATAGTTTGCTCTCTGTT  250

seq1  GCTGTGATAAATACCATGATCAAAAGCATCTTGGGGAGAAAGAAGTTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGATAAATACCATGATCAAAAGCATCTTGGGGAGAAAGAAGTTTAT  300

seq1  TTGGCTTGCATATATATCCCTATCATGGTCTAACATTGAGGGATGCCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTTGCATATATATCCCTATCATGGTCTAACATTGAGGGATGCCAAA  350

seq1  GAAGGACATTAAGCAAGGCAGAATCCTAGATACAGGTATAGGGCATGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGACATTAAGCAAGGCAGAATCCTAGATACAGGTATAGGGCATGAAG  400

seq1  AAACACTACCTACTGTGTCTCTCTCTCCCCCTATGACATGCTCATCCTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACTACCTACTGTGTCTCTCTCTCCCCCTATGACATGCTCATCCTGC  450

seq1  TCTCCCATACAGCCCAAGATGGCACTATGCAGAGTGGACAGAGCCCTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCATACAGCCCAAGATGGCACTATGCAGAGTGGACAGAGCCCTCTT  500

seq1  ACAGCATTCATTGATCAAGTAATTAGGACATTTTCTCAATTGACATTCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCATTCATTGATCAAGTAATTAGGACATTTTCTCAATTGACATTCCC  550

seq1  TCTCCTCAGATAACTCAATTTGCACCACACTGACAAAAAAAAACAACAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCAGATAACTCAATTTGCACCACACTGACAAAAAAAAACAACAAA  600

seq1  AAAAACAAACAAACAAAAAACAAAACAAAACAAAAAACCTATAACTACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAAACAAACAAAAAACAAAACAAAACAAAAAACCTATAACTACAG  650

seq1  TACTCTTGTGGTTATTGAATAAGTAAAATCAATTTCAAGTTTACTGTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTTGTGGTTATTGAATAAGTAAAATCAATTTCAAGTTTACTGTATT  700

seq1  TGGGGGGTGGGGGTTGCTTATTTGCTTGCTTGCTTGCTTGCTTGCTTGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGGTGGGGGTTGCTTATTTGCTTGCTTGCTTGCTTGCTTGCTTGCT  750

seq1  TGCTTGCTTGCTTGGAGGTTCTTTTAAGACACCAAATAAATGTGAATAAG  800
      ||||||||||||||||||||||||| ||||||||||| ||||||||||||
seq2  TGCTTGCTTGCTTGGAGGTTCTTTT-AGACACCAAAT-AATGTGAATAAG  798

seq1: chr7_96256948_96258107
seq2: B6Ng01-112C17.g_66_1219 (reverse)

seq1  CATGACTTCCCCGTGAAGTTAAAAGGAACCCTTCCCACTCT-CAGAGTCA  49
      |||||||| ||||||| ||   || |||||||||||| ||| ||||||||
seq2  CATGACTT-CCCGTGAGGT---AAAGAACCCTTCCCA-TCTCCAGAGTCA  45

seq1  ATAGCTTTGTCCGGGAAGTAAATTAAAAGTGATCAAATCAGATTTGAGAG  99
      |||||||||||| ||||   |||||||||||||| |||||||||||||||
seq2  ATAGCTTTGTCCCGGAAAGTAATTAAAAGTGATC-AATCAGATTTGAGAG  94

seq1  ACCTCTGGGGGAGAATGCCTAAGACAGCTGAGGCTTTCCTGAGGGCATGA  149
      | ||||| |||||||||||| |||||||||||||||||||||||||||||
seq2  A-CTCTGAGGGAGAATGCCTTAGACAGCTGAGGCTTTCCTGAGGGCATGA  143

seq1  AAATACTAATACTCTGCCCAAGTCCATGATCAAAGGCTTGCCAGACTCAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTAATACTCTGCCCAAGTCCATGATCAAAGGCTTGCCAGACTCAG  193

seq1  TCATGAAGAAGAAAATGCACTTAACAGGATTAGAGAAACCTTTGATTCTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGAAGAAGAAAATGCACTTAACAGGATTAGAGAAACCTTTGATTCTT  243

seq1  AATCTGTTGCTGTGAGAAGACAGGAATTTTGTCAACCAAATAGAATCTAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGTTGCTGTGAGAAGACAGGAATTTTGTCAACCAAATAGAATCTAG  293

seq1  CATCAACTATCATGTTTTTGAAAAATCTTTATTGTAATCACTATTAAGCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAACTATCATGTTTTTGAAAAATCTTTATTGTAATCACTATTAAGCA  343

seq1  GTAACTGGTATATGTATTCAAACAAGAAATAATCAGATATAAATCTAATA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTGGTATATGTATTCAAACAAGAAATAATCAGATATAAATCTAATA  393

seq1  TAGAATTGAGCACCTTGTCTCCCTTTACTGAATCTTTTCCTAGACTTCTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTGAGCACCTTGTCTCCCTTTACTGAATCTTTTCCTAGACTTCTG  443

seq1  CAATCAAAACATCCCAGACATAGTGTTAGAGCTGTGAGGGACCTTGAAGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCAAAACATCCCAGACATAGTGTTAGAGCTGTGAGGGACCTTGAAGA  493

seq1  ACATCTGTCAAAATACCATGTTTTCTTAGACAGCAGAGTAGAAGCTCAAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTGTCAAAATACCATGTTTTCTTAGACAGCAGAGTAGAAGCTCAAA  543

seq1  CTTCTCAGGGTTCCTACTTCATTACTGGTAGAACTGAGGTTGAAAAAAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCAGGGTTCCTACTTCATTACTGGTAGAACTGAGGTTGAAAAAAAA  593

seq1  TGATTTTTTTTCTCATCTTCCTATGGAATGATTTCCCCCCAGTGGCATGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTTTTTCTCATCTTCCTATGGAATGATTTCCCCCCAGTGGCATGT  643

seq1  TATAAAAATCAGGCTTAATTGCATTTAATACTCTCTTTTTAATTATTTGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAATCAGGCTTAATTGCATTTAATACTCTCTTTTTAATTATTTGT  693

seq1  TGAATTATTCAATATATTTCTAAGGCGTTTTGTCCTAGAAAATTAAGCTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTATTCAATATATTTCTAAGGCGTTTTGTCCTAGAAAATTAAGCTA  743

seq1  AATAACATTTCCATCTTAAAAATTGTTACCCCATAGACTGCCAGAAAATA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACATTTCCATCTTAAAAATTGTTACCCCATAGACTGCCAGAAAATA  793

seq1  TTGTTTTCTGGAACACTTCCTTTCTTAAGAGTTTCAGAAAGTAGAGATTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTCTGGAACACTTCCTTTCTTAAGAGTTTCAGAAAGTAGAGATTT  843

seq1  TCCTGAAGAGGCACTAAACATTCTAAGAGCTGTGGAGGGAAAGACAGTGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAAGAGGCACTAAACATTCTAAGAGCTGTGGAGGGAAAGACAGTGA  893

seq1  TTGATGAAAGAAATGGTGGGTTGCTTATAGGAGATAGCAATAGGAAGACT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGAAAGAAATGGTGGGTTGCTTATAGGAGATAGCAATAGGAAGACT  943

seq1  GAAGGAGTGGGCAAAATGCATGGGGTATAGGAAAAGGAATAGCTCTGCTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAGTGGGCAAAATGCATGGGGTATAGGAAAAGGAATAGCTCTGCTG  993

seq1  ACTAGAATAAAGAAATCTATTAAAGGACAGCAAATATTTCAAGTGAACCA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGAATAAAGAAATCTATTAAAGGACAGCAAATATTTCAAGTGAACCA  1043

seq1  GATTGTCAAATCTGGACTGAAATTAATTTCTATAGAGAAATGCCTCAGAG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTCAAATCTGGACTGAAATTAATTTCTATAGAGAAATGCCTCAGAG  1093

seq1  CATATTCCATCGCACACCAATTCCCAAATATGCTGTATAAAAATAAAGAA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTCCATCGCACACCAATTCCCAAATATGCTGTATAAAAATAAAGAA  1143

seq1  AATGGGAATTC  1160
      |||||||||||
seq2  AATGGGAATTC  1154