BAC Information

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BAC

Clone NameB6Ng01-113A22
Chromosome7 (Build37)
Map Location 72,513,803 - 72,514,812
singlet/doubletsinglet
Overlap geneTjp1
Upstream geneMtmr15, LOC100041582, Mphosph10, Mcee, Apba2, 5730507A09Rik, Ndnl2
Downstream geneGm1693, EG665234, Tarsl2, Tm2d3, LOC665241, Pcsk6, Snrpa1, H47, Chsy1, Lrrk1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113A22.bB6Ng01-113A22.g
ACCDH918950DH918951
length1,0161,154
definitionDH918950|Mus musculus domesticus DNA, BAC clone: B6Ng01-113A22, 5' end.DH918951|Mus musculus domesticus DNA, BAC clone: B6Ng01-113A22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgacaggaccttgtttctttggcagatacaaggtttagtatag
attgttttaaggaatagagtattgctcctgtaggagtaatttagtttgta
tctttttttttgagcaaacattgataagagatctaaaagaaagactgggt
ccaaaaactagaatcagtgcaacatttgttacttttaaaatataagtgat
gatatttgcatttgctgggacttcctttcctgggatgaaaggctttgttg
ccatattacacagaatgtcagtttgtttcagagtgtgagctctggtactt
gttagtcaagacaacacacttggaaagtgttattccaagagaagtgtttc
caatagcttgctgtggcaaggtgatttagaaggtgtgcttttacacataa
attatggtattgagatcttatggcacataggggcacctctgtagttaaat
atttgcgtccttagctgggaactgaagggttattttcttggatgcagtct
tacataaagccaggccctccctcaatgagctagtgaatgcagtgttaacc
agttgcctccttccctaagtcacatttattgttctcagggaacccaaaat
gcttaagctccagctccatggttgttttacatagggtgcttttgtttctc
ctacccctgtgaagacatacagacactcgttttgcagcctgctcttgtgt
ttttggcacagcagttgtagaacttgagtgcgtcagtacttttcattctc
cagctttgtaaggtcgagtagttttcaccatgccgctccagtcatcactg
cccttttggatggagctgttgggcttgtttccaggatattgttattgcaa
ttgagtataatttatataattgtatttacatttttgtattgtacacctgc
tactctatgtcagcttattaaaagtgaactgctatgcccaaagagtgcgt
ttcaattcttgatatacaccaaactccttacttccaagtctttacctaag
gaataaacaccagcaa
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactatgcaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatcgacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taagatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtgaacactatgcccctccttagaagagggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagataa
aaggatggaccatgtagacactagcatatccggggatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcaagatatgctgaaag
gaccctgatatagctgtctcttgtcagagtatgcctgggcctagcaaaca
tagaagtggatgctcacagtcggctaatggatggatcacatggcccccaa
tgaaggagctagagaaagtaccaaagaagctaaagggatctgcaacccta
taggtggaacaacattatgaactaaccagttacctcggagctcttggact
tctagctgctatttgcatcaaaagaatggccttagtctgccattcacgtc
aagaagaaggcccattgggaagcgcaacctttatatggctcccaatcatg
ggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_72513803_72514812
seq2: B6Ng01-113A22.b_49_1064 (reverse)

seq1  TTGCT-GTGTTTATT-CTTAGGTAAAGACTTTGGAGTAA-GAGTTT-GTG  46
      ||||| ||||||||| ||||||||||||||| | ||||| |||||| |||
seq2  TTGCTGGTGTTTATTCCTTAGGTAAAGACTTGGAAGTAAGGAGTTTGGTG  50

seq1  TATATCAGAATTTGAAACGCACTCTTT-GGCATAGCAGTTTCACTTTTAA  95
      |||||||  | |||||||||||||||| |||||||||| |||||||||||
seq2  TATATCAAGAATTGAAACGCACTCTTTGGGCATAGCAG-TTCACTTTTAA  99

seq1  TAAGCTGACATAGAGTAGCAGGTGTACAATACAAAAATGTAAATACAATT  145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTGACATAGAGTAGCAGGTGTACAATACAAAAATGTAAATACAATT  149

seq1  ATATAAATTATACTC-ATTGCAATAACAATATCCTGGAAACAAGCCCAAC  194
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ATATAAATTATACTCAATTGCAATAACAATATCCTGGAAACAAGCCCAAC  199

seq1  AGCTCCATCCAAAA-GGCAGTGATGACTGGAGCGGCATGGTGAAAACTAC  243
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AGCTCCATCCAAAAGGGCAGTGATGACTGGAGCGGCATGGTGAAAACTAC  249

seq1  TCGACCTTACAAAGCTGGAGAATGAAAAGTACTGACGCACTCAAGTTCTA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGACCTTACAAAGCTGGAGAATGAAAAGTACTGACGCACTCAAGTTCTA  299

seq1  CAACTGCTGTGCCAAAAACACAAGAGCAGGCTGCAAAACGAGTGTCTGTA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGCTGTGCCAAAAACACAAGAGCAGGCTGCAAAACGAGTGTCTGTA  349

seq1  TGTCTTCACAGGGGTAGGAGAAACAAAAGCACCCTATGTAAAACAACCAT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCACAGGGGTAGGAGAAACAAAAGCACCCTATGTAAAACAACCAT  399

seq1  GGAGCTGGAGCTTAAGCATTTTGGGTTCCCTGAGAACAATAAATGTGACT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTGGAGCTTAAGCATTTTGGGTTCCCTGAGAACAATAAATGTGACT  449

seq1  TAGGGAAGGAGGCAACTGGTTAACACTGCATTCACTAGCTCATTGAGGGA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAAGGAGGCAACTGGTTAACACTGCATTCACTAGCTCATTGAGGGA  499

seq1  GGGCCTGGCTTTATGTAAGACTGCATCCAAGAAAATAACCCTTCAGTTCC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTGGCTTTATGTAAGACTGCATCCAAGAAAATAACCCTTCAGTTCC  549

seq1  CAGCTAAGGACGCAAATATTTAACTACAGAGGTGCCCCTATGTGCCATAA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTAAGGACGCAAATATTTAACTACAGAGGTGCCCCTATGTGCCATAA  599

seq1  GATCTCAATACCATAATTTATGTGTAAAAGCACACCTTCTAAATCACCTT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCAATACCATAATTTATGTGTAAAAGCACACCTTCTAAATCACCTT  649

seq1  GCCACAGCAAGCTATTGGAAACACTTCTCTTGGAATAACACTTTCCAAGT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACAGCAAGCTATTGGAAACACTTCTCTTGGAATAACACTTTCCAAGT  699

seq1  GTGTTGTCTTGACTAACAAGTACCAGAGCTCACACTCTGAAACAAACTGA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGTCTTGACTAACAAGTACCAGAGCTCACACTCTGAAACAAACTGA  749

seq1  CATTCTGTGTAATATGGCAACAAAGCCTTTCATCCCAGGAAAGGAAGTCC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTGTGTAATATGGCAACAAAGCCTTTCATCCCAGGAAAGGAAGTCC  799

seq1  CAGCAAATGCAAATATCATCACTTATATTTTAAAAGTAACAAATGTTGCA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAATGCAAATATCATCACTTATATTTTAAAAGTAACAAATGTTGCA  849

seq1  CTGATTCTAGTTTTTGGACCCAGTCTTTCTTTTAGATCTCTTATCAATGT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTCTAGTTTTTGGACCCAGTCTTTCTTTTAGATCTCTTATCAATGT  899

seq1  TTGCTCAAAAAAAAAGATACAAACTAAATTACTCCTACAGGAGCAATACT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCAAAAAAAAAGATACAAACTAAATTACTCCTACAGGAGCAATACT  949

seq1  CTATTCCTTAAAACAATCTATACTAAACCTTGTATCTGCCAAAGAAACAA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCCTTAAAACAATCTATACTAAACCTTGTATCTGCCAAAGAAACAA  999

seq1  GGTCCTGTCAAGAATTC  1010
      |||||||||||||||||
seq2  GGTCCTGTCAAGAATTC  1016