BAC Information

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BAC

Clone NameB6Ng01-113N14
Chromosome7 (Build37)
Map Location 76,551,176 - 76,712,893
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100041800, EG384639, Arrdc4, LOC384741
Downstream geneEG665410, Nr2f2, LOC100042833, B130024G19Rik, LOC100042838, LOC665486, LOC100041957
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113N14.bB6Ng01-113N14.g
ACCDH919534DH919535
length1,0091,075
definitionDH919534|Mus musculus domesticus DNA, BAC clone: B6Ng01-113N14, 5' end.DH919535|Mus musculus domesticus DNA, BAC clone: B6Ng01-113N14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,551,176 - 76,552,081)(76,711,815 - 76,712,893)
sequence
gaattctgtaaatatgctgaaaagtttttaattgaaatagagaaagactt
aagttcactgtgttaacagagcttcagggatgagggcaatatgaaaggct
ttaaaactacacataatcagtagcctgagaggaaatgaaatacagaatta
agagtgtaaataacagaaattgttattaaaatgcacgtgaagtcaaaaga
ttatggttttagggatctccgtgatcctgaagtgtgtagggtacagtgat
ccctacacatagatgtagcaatctcttcctattagcatctcattatttac
agaggtacagtaacaacctttaggaaagagacacagataacaactaccaa
gtcagtagaacagtgaatgctagaaaacaaaggaataatgtcttcttttt
ttttcactttttattattttttaattgggtatttatttcatttacctttc
caatgctatcccaaaagtccctcacacgctctcccacccatgcccctacc
cacccactcccacttcttggccctggcattcccctgtattgaggcatata
aagtttgcacaaccaatgggcctctcttcccactgatggccaactaggcc
atcttctgattcatatgcagctagagacacaagctccagggggtattggt
tagttcatattgttgttccacctataggattgcagatcccttcagctcct
tgggtactttctctagctcctccattggggactctgtgatccatccaata
gctgactgtgagcatccacttctgtgtttgctaggccctggcatagtctc
ataagagacagccgtatctgggtcctttcagcaaaatcttgctagtgtat
gcaatgtgtcagcttttggaagctgattatggaatggatccctggaaatg
gcagtctctagatggtccatcctttcgtcacagctccaaactttgtctct
gtaattctaagaaggggcaaagtgtccacacttttggtcttcgtcttctt
gagtttcat
gaattcaatttttctccatgcgttctccaagctaaacattattgcctgac
ctgacaaagcacacccatcttttccaaaactataaatattattatttaaa
tgatatagaccaaaaattgtccatgccaggaaaatattcatgcaagtaag
atgaagaagttgatgaggagagtctgagggcagtaatttgtaatttgaat
gtgtgctagtgtgtgtgtttgtgtgtgtgcatgtgtgtgtgcatgcatgt
gcatgtgtgcatatagaagtctctgtgtgtgtctatgtgtatataatcat
ttttattttctattgccacaagctctgaaagtttgatttgaggtccaaat
gaagagaagaaatgaagtgaaaataatgaattgggtgggagagagtacag
gtaaaaagagcctagaaaagggattctgatgggaaaccaaataagaaagc
cattccaaagcagaaatttggtgaaaaattcctcaagtccataatgccca
tctgagcaaggcatggtgcattataccatggtacagctataaattattca
ttcacagttctgtattggtagtgaagaaatggcaccattttgactcctca
ctgactctcttggttttcttcatgggaaatgagtgcctctctcctttgca
agtatctgccaattacatatgtggatataagcaaatgtctgtacctggct
gccaagcagtgtatattcctttctttgaatttcagaaactgccatcttta
ggtttcctttgtgagaaacagttcccataacaacatgagaagctggacct
ttcagagacctccttgcagagctctggaatcttccttgcctggaaggtag
ggaggagactgcagcaatcttgcccaggctcccctgttgatgcatactga
ttggaaacaggccaatcccagaacaccacgggcaaaccattttcccaggt
tgcggtaattatgcagcatctcaaaagcaaatgttcgtacatctattaac
agacgattaataggagggactgttgagcatccttacagcctaaaagaaga
gaagcctatcctcaggccattagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_76551176_76552081
seq2: B6Ng01-113N14.b_47_952

seq1  GAATTCTGTAAATATGCTGAAAAGTTTTTAATTGAAATAGAGAAAGACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTAAATATGCTGAAAAGTTTTTAATTGAAATAGAGAAAGACTT  50

seq1  AAGTTCACTGTGTTAACAGAGCTTCAGGGATGAGGGCAATATGAAAGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCACTGTGTTAACAGAGCTTCAGGGATGAGGGCAATATGAAAGGCT  100

seq1  TTAAAACTACACATAATCAGTAGCCTGAGAGGAAATGAAATACAGAATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAACTACACATAATCAGTAGCCTGAGAGGAAATGAAATACAGAATTA  150

seq1  AGAGTGTAAATAACAGAAATTGTTATTAAAATGCACGTGAAGTCAAAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGTAAATAACAGAAATTGTTATTAAAATGCACGTGAAGTCAAAAGA  200

seq1  TTATGGTTTTAGGGATCTCCGTGATCCTGAAGTGTGTAGGGTACAGTGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGTTTTAGGGATCTCCGTGATCCTGAAGTGTGTAGGGTACAGTGAT  250

seq1  CCCTACACATAGATGTAGCAATCTCTTCCTATTAGCATCTCATTATTTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTACACATAGATGTAGCAATCTCTTCCTATTAGCATCTCATTATTTAC  300

seq1  AGAGGTACAGTAACAACCTTTAGGAAAGAGACACAGATAACAACTACCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTACAGTAACAACCTTTAGGAAAGAGACACAGATAACAACTACCAA  350

seq1  GTCAGTAGAACAGTGAATGCTAGAAAACAAAGGAATAATGTCTTCTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTAGAACAGTGAATGCTAGAAAACAAAGGAATAATGTCTTCTTTTT  400

seq1  TTTTCACTTTTTATTATTTTTTAATTGGGTATTTATTTCATTTACCTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCACTTTTTATTATTTTTTAATTGGGTATTTATTTCATTTACCTTTC  450

seq1  CAATGCTATCCCAAAAGTCCCTCACACGCTCTCCCACCCATGCCCCTACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCTATCCCAAAAGTCCCTCACACGCTCTCCCACCCATGCCCCTACC  500

seq1  CACCCACTCCCACTTCTTGGCCCTGGCATTCCCCTGTATTGAGGCATATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCACTCCCACTTCTTGGCCCTGGCATTCCCCTGTATTGAGGCATATA  550

seq1  AAGTTTGCACAACCAATGGGCCTCTCTTCCCACTGATGGCCAACTAGGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTGCACAACCAATGGGCCTCTCTTCCCACTGATGGCCAACTAGGCC  600

seq1  ATCTTCTGATTCATATGCAGCTAGAGACACAAGCTCCAGGGGGTATTGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCTGATTCATATGCAGCTAGAGACACAAGCTCCAGGGGGTATTGGT  650

seq1  TAGTTCATATTGTTGTTCCACCTATAGGATTGCAGATCCCTTCAGCTCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCATATTGTTGTTCCACCTATAGGATTGCAGATCCCTTCAGCTCCT  700

seq1  TGGGTACTTTCTCTAGCTCCTCCATTGGGGACTCTGTGATCCATCCAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTACTTTCTCTAGCTCCTCCATTGGGGACTCTGTGATCCATCCAATA  750

seq1  GCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCTGGCATAGTCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCTGGCATAGTCTC  800

seq1  ATAAGAGACAGCCGTATCTGGGTCCTTTCAGCAAAATCTTGCTAGTGTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAGACAGCCGTATCTGGGTCCTTTCAGCAAAATCTTGCTAGTGTAT  850

seq1  GCAATGTGTCAGCTTTTGGAAGCTGATTATGGAATGGATCCCTGGATATG  900
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GCAATGTGTCAGCTTTTGGAAGCTGATTATGGAATGGATCCCTGGAAATG  900

seq1  GCAGTC  906
      ||||||
seq2  GCAGTC  906

seq1: chr7_76711815_76712893
seq2: B6Ng01-113N14.g_70_1144 (reverse)

seq1  AACTAAATGCCCTGA-GATAGGCTTCTCTTCTTTTAGGCTGTAAGGTTGC  49
      |||| |||| ||||| |||||||||||||||||||||||||||||| |||
seq2  AACT-AATGGCCTGAGGATAGGCTTCTCTTCTTTTAGGCTGTAAGGATGC  49

seq1  TTCACAAGTTCCTTCTTTTAATCGTCTGTTAATAGATGTACGAACATTTG  99
       |||  ||| ||| || |||||||||||||||||||||||||||||||||
seq2  -TCAACAGTCCCTCCTATTAATCGTCTGTTAATAGATGTACGAACATTTG  98

seq1  CTTTTTGAGATGCTGCATAATTTACCGCAACCTGGGAAAAATGGTTTGCC  149
      | |||||||||||||||||| ||||||||||||||| |||||||||||||
seq2  C-TTTTGAGATGCTGCATAA-TTACCGCAACCTGGG-AAAATGGTTTGCC  145

seq1  CGTGGTGTTCTGGGATTGGCCTGCTTCCAAATCAGTATGCATCAACAGGG  199
      ||||||||||||||||||||||| |||| |||||||||||||||||||||
seq2  CGTGGTGTTCTGGGATTGGCCTGTTTCC-AATCAGTATGCATCAACAGGG  194

seq1  GAGCCTGGGCAAGATTGCTGGCAGTCTCCTCCCTACCTTCCAGGCAAGGA  249
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GAGCCTGGGCAAGATTGCT-GCAGTCTCCTCCCTACCTTCCAGGCAAGGA  243

seq1  AGATTCCAGAGCTCTGC-AGGAGGTCTCTGAAAGGTCCAGCTTCTCATGT  298
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AGATTCCAGAGCTCTGCAAGGAGGTCTCTGAAAGGTCCAGCTTCTCATGT  293

seq1  TGTTATGGGAACTGTTTCTCACAAAGGAAACCTAAAGATGGCAGTTTCTG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATGGGAACTGTTTCTCACAAAGGAAACCTAAAGATGGCAGTTTCTG  343

seq1  -AATTCAAAGAAAGGAATATACACTGCTTGGCAGCCAGGTACAGACATTT  397
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCAAAGAAAGGAATATACACTGCTTGGCAGCCAGGTACAGACATTT  393

seq1  GCTTATATCCACATATGTAATTGGCAGATACTTGCAAAGGAGAGAGGCAC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATATCCACATATGTAATTGGCAGATACTTGCAAAGGAGAGAGGCAC  443

seq1  TCATTTCCCATGAAGAAAACCAAGAGAGTCAGTGAGGAGTCAAAATGGTG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCCCATGAAGAAAACCAAGAGAGTCAGTGAGGAGTCAAAATGGTG  493

seq1  CCATTTCTTCACTACCAATACAGAACTGTGAATGAATAATTTATAGCTGT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTCTTCACTACCAATACAGAACTGTGAATGAATAATTTATAGCTGT  543

seq1  ACCATGGTATAATGCACCATGCCTTGCTCAGATGGGCATTATGGACTTGA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGGTATAATGCACCATGCCTTGCTCAGATGGGCATTATGGACTTGA  593

seq1  GGAATTTTTCACCAAATTTCTGCTTTGGAATGGCTTTCTTATTTGGTTTC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTTTTCACCAAATTTCTGCTTTGGAATGGCTTTCTTATTTGGTTTC  643

seq1  CCATCAGAATCCCTTTTCTAGGCTCTTTTTACCTGTACTCTCTCCCACCC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCAGAATCCCTTTTCTAGGCTCTTTTTACCTGTACTCTCTCCCACCC  693

seq1  AATTCATTATTTTCACTTCATTTCTTCTCTTCATTTGGACCTCAAATCAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCATTATTTTCACTTCATTTCTTCTCTTCATTTGGACCTCAAATCAA  743

seq1  ACTTTCAGAGCTTGTGGCAATAGAAAATAAAAATGATTATATACACATAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCAGAGCTTGTGGCAATAGAAAATAAAAATGATTATATACACATAG  793

seq1  ACACACACAGAGACTTCTATATGCACACATGCACATGCATGCACACACAC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACAGAGACTTCTATATGCACACATGCACATGCATGCACACACAC  843

seq1  ATGCACACACACAAACACACACACTAGCACACATTCAAATTACAAATTAC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACACACACAAACACACACACTAGCACACATTCAAATTACAAATTAC  893

seq1  TGCCCTCAGACTCTCCTCATCAACTTCTTCATCTTACTTGCATGAATATT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTCAGACTCTCCTCATCAACTTCTTCATCTTACTTGCATGAATATT  943

seq1  TTCCTGGCATGGACAATTTTTGGTCTATATCATTTAAATAATAATATTTA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGGCATGGACAATTTTTGGTCTATATCATTTAAATAATAATATTTA  993

seq1  TAGTTTTGGAAAAGATGGGTGTGCTTTGTCAGGTCAGGCAATAATGTTTA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTTGGAAAAGATGGGTGTGCTTTGTCAGGTCAGGCAATAATGTTTA  1043

seq1  GCTTGGAGAACGCATGGAGAAAAATTGAATTC  1079
      ||||||||||||||||||||||||||||||||
seq2  GCTTGGAGAACGCATGGAGAAAAATTGAATTC  1075