BAC Information

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BAC

Clone NameB6Ng01-113P22
Chromosome7 (Build37)
Map Location 27,019,293 - 27,158,563
singlet/doubletdoublet
Overlap geneLOC667968, Cyp2a4, Nlrp9c
Upstream geneGsk3a, Erf, Cic, Pafah1b3, EG623131, Tmem145, Megf8, Cnfn, Lipe, BC024561, LOC434148, Ceacam1, Ceacam2, LOC100043722, EG632778, 2310004L02Rik, B3gnt8, Bckdha, Exosc5, A830041P22Rik, BC028440, Tgfb1, Ccdc97, Hnrpul1, Axl, LOC667950, Cyp2s1, LOC100043732, EG623475, Cyp2b10, LOC232993, EG667957, BC026762, Cyp2b13, EG668047, LOC623532, Cyp2b9
Downstream geneLOC100043195, Nlrp4a, Nlrp9a, V1re12, EG243881, LOC623830, Cyp2b19, Cyp2g1, LOC100043745, Cyp2a5, EG233005, EG330491, Cyp2a12, LOC100043199, Cyp2f2, Gm1450, Egln2, Rab4b, Mia1, Snrpa, Itpkc, Adck4, Numbl, Ltbp4, Shkbp1, Spnb4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113P22.bB6Ng01-113P22.g
ACCDH919634DH919635
length1,1231,011
definitionDH919634|Mus musculus domesticus DNA, BAC clone: B6Ng01-113P22, 5' end.DH919635|Mus musculus domesticus DNA, BAC clone: B6Ng01-113P22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(27,157,443 - 27,158,563)(27,019,293 - 27,020,295)
sequence
gaattcaccaactcgcttctaatatgcaatgtagcttgtactgaagattt
ctatctcggtgggattccctggctctttcatggtaaacactctgtagacc
agccctgagttgctgtccttactaaatactctgcagaccagccctgagct
gccgactccgtcttttgtaatgtttaattagttactgaataggtaacttc
cttactgcatttctaccggattccaagctcatcagcttctggcacattgg
aacactggtgggagacttaactatatcagaattcaatcttaaaaggcact
tataataaaataatactaaaagagagcacatgggtccatacactagacta
actcgggcatagggtatgagtatacgggttaatgagaatgccaaagctcc
aggaggtgcgtttccgtgaaactctttgcctcatgagtgtttccaggcct
ctcgtcctcccaagcaaacttcactggagtgtgcatagcattatttaaag
tgtcatgggaaaccatgaacttcaggctcaggaagggtttaaggacatgt
tatattaattactgggagaaattcaacacatggtgatattgcacacgaat
ctgaaatcagtgatatgtactccacttatttctttatgacatatgtatta
taaccagaaggaatgagagtagaaacaccacataaagagatcaaagcaga
aaaaacttaggtgagccaatgtagagcagaggaccccagttgggacttta
tggttcatataaataagtcaagctgttaagatggaatttcatggactggg
aatatagctcagtttgatagaattcttactttgtatacacttttgagttt
gacttctttcagcacaggcttaaataaaagctatgggtagctccataact
tataatctcagcactgggggataaaagttaggaacttaaaagtcatccct
agctatggtaaagaatctgaagccttggctgtttacatgagattctatct
aaaaaaaggggcagaatggtaaatggaatgtggtcaatgaataatgctgc
tggaatggagattcattctccacaaggggacgctctgacccaggttattc
accccttgatcatgtacatacaa
gaattcagaccttataccgagcacattagcatagatctcagagcctggag
agctgataactggggactggggctgttgggaagaatagggaagtgactca
ctgaccttggatctggtttccagaaggtgtcccagagtaagaaacatggg
gccattctcaagagaagtgggtacacctggctgcctcagtacaatcagtg
agctaagaaggagatcttgtacactgggggtattttggccaagccactct
ccttgagagtgatgtcaatgtctttgggagccacagggctggacactgag
aagttcctggaggatggtagtgaagaaaaggaacaattcacttcgggcaa
tgccttctccaagacatatacgagttcctgagggcacagaaaatgagcca
tgtgagcctccacacagtatacaaaatttggactgtccaatccctaaacc
catttagactactctgacaatagcaatgagtaagaatgaatttaaccctt
aatctgcaattcaatggagaatgtttagagattctcaaaccttaaagaat
tggtgcaagtgccagtgagatgccttagcaaggtgtttgtgttcaatgtc
ccagacccacatgctggaagaagagaatcaactcaacaagctgtcttcca
acataaaactatatacacataccataaaacacatgatataaataaatcag
aaaatgaagaatggataattggaggatgcctcatattcaattttttaaaa
aaaattttagcaacaatgtaacttttccacatatgttttttcccttttta
ttagatattttatttatattttcaaatgttatcccctttcctagtttccc
ctctgaaaatcccctatcctctctccccctcctccgcttgctccacaacc
caccaattcccacttcctgggccaaggcattcccatatattgggggcata
gttcccttcacaggaatccaaggacctatttccccattgatgacccacta
ggcccatcctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_27157443_27158563
seq2: B6Ng01-113P22.b_48_1170 (reverse)

seq1  TTGTATGTACATGTATCCAGGGGGTGGATAACCTGGGTCAGAGCGTCCCC  50
      ||||||||||||| || || |||||| |||||||||||||||||||||||
seq2  TTGTATGTACATG-AT-CAAGGGGTGAATAACCTGGGTCAGAGCGTCCCC  48

seq1  TTGTGGAGAATGATTCTCCATTCCAGCAGCCATTATTCATTGACCACATT  100
      ||||||||||||| ||||||||||||||| ||||||||||||||||||||
seq2  TTGTGGAGAATGAATCTCCATTCCAGCAG-CATTATTCATTGACCACATT  97

seq1  TCATTTTCCCATTCTTGCCCCCTTTTTTTAGATAGAATCTCATGTAAACA  150
       || ||| |||||||   ||||||||||||||||||||||||||||||||
seq2  CCA-TTTACCATTCT--GCCCCTTTTTTTAGATAGAATCTCATGTAAACA  144

seq1  AGCCAGGCTTCAGATTCTTTA-CATAGCTAAGGATGACTTTTAAGTTCCT  199
        | ||||||||||||||||| |||||||| |||||||||||||||||||
seq2  GCCAAGGCTTCAGATTCTTTACCATAGCTAGGGATGACTTTTAAGTTCCT  194

seq1  AAC-TTTATCCCCCAGTGCTGAGATTAT-AGTTATGGAGCTA-CCATAGC  246
      ||| |||||||||||||||||||||||| ||||||||||||| |||||||
seq2  AACTTTTATCCCCCAGTGCTGAGATTATAAGTTATGGAGCTACCCATAGC  244

seq1  TTTTATTTAAGCCTGTGCTGAA--GAGTCAAACTCAAAAGTGTATACAAA  294
      ||||||||||||||||||||||   |||||||||||||||||||||||||
seq2  TTTTATTTAAGCCTGTGCTGAAAGAAGTCAAACTCAAAAGTGTATACAAA  294

seq1  GTAAGAATTCTATC-AACTGAGCTATATTCCCAGTCCATGAAATTCCATC  343
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GTAAGAATTCTATCAAACTGAGCTATATTCCCAGTCCATGAAATTCCATC  344

seq1  TTAACAGCTTGACTTATTTATATGAACCATAAAGTCCCAACTGGGGTCCT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAGCTTGACTTATTTATATGAACCATAAAGTCCCAACTGGGGTCCT  394

seq1  CTGCTCTACATTGGCTCACCTAAG-TTTTTCTGCTTTGATCTCTTTATGT  442
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CTGCTCTACATTGGCTCACCTAAGTTTTTTCTGCTTTGATCTCTTTATGT  444

seq1  GGTGTTTCTACTCTCATTCCTTCTGGTTATAATACATATGTCATAAAGAA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTTCTACTCTCATTCCTTCTGGTTATAATACATATGTCATAAAGAA  494

seq1  ATAAGTGGAGTACATATCACTGATTTCAGATTCGTGTGCAATATCACCAT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTGGAGTACATATCACTGATTTCAGATTCGTGTGCAATATCACCAT  544

seq1  GTGTTGAATTTCTCCCAGTAATTAATATAACATGTCCTTAAACCCTTCCT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGAATTTCTCCCAGTAATTAATATAACATGTCCTTAAACCCTTCCT  594

seq1  GAGCCTGAAGTTCATGGTTTCCCATGACACTTTAAATAATGCTATGCACA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTGAAGTTCATGGTTTCCCATGACACTTTAAATAATGCTATGCACA  644

seq1  CTCCAGTGAAGTTTGCTTGGGAGGACGAGAGGCCTGGAAACACTCATGAG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGTGAAGTTTGCTTGGGAGGACGAGAGGCCTGGAAACACTCATGAG  694

seq1  GCAAAGAGTTTCACGGAAACGCACCTCCTGGAGCTTTGGCATTCTCATTA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGAGTTTCACGGAAACGCACCTCCTGGAGCTTTGGCATTCTCATTA  744

seq1  ACCCGTATACTCATACCCTATGCCCGAGTTAGTCTAGTGTATGGACCCAT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCGTATACTCATACCCTATGCCCGAGTTAGTCTAGTGTATGGACCCAT  794

seq1  GTGCTCTCTTTTAGTATTATTTTATTATAAGTGCCTTTTAAGATTGAATT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTCTCTTTTAGTATTATTTTATTATAAGTGCCTTTTAAGATTGAATT  844

seq1  CTGATATAGTTAAGTCTCCCACCAGTGTTCCAATGTGCCAGAAGCTGATG  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATATAGTTAAGTCTCCCACCAGTGTTCCAATGTGCCAGAAGCTGATG  894

seq1  AGCTTGGAATCCGGTAGAAATGCAGTAAGGAAGTTACCTATTCAGTAACT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGGAATCCGGTAGAAATGCAGTAAGGAAGTTACCTATTCAGTAACT  944

seq1  AATTAAACATTACAAAAGACGGAGTCGGCAGCTCAGGGCTGGTCTGCAGA  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAACATTACAAAAGACGGAGTCGGCAGCTCAGGGCTGGTCTGCAGA  994

seq1  GTATTTAGTAAGGACAGCAACTCAGGGCTGGTCTACAGAGTGTTTACCAT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTAGTAAGGACAGCAACTCAGGGCTGGTCTACAGAGTGTTTACCAT  1044

seq1  GAAAGAGCCAGGGAATCCCACCGAGATAGAAATCTTCAGTACAAGCTACA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGCCAGGGAATCCCACCGAGATAGAAATCTTCAGTACAAGCTACA  1094

seq1  TTGCATATTAGAAGCGAGTTGGTGAATTC  1121
      |||||||||||||||||||||||||||||
seq2  TTGCATATTAGAAGCGAGTTGGTGAATTC  1123

seq1: chr7_27019293_27020295
seq2: B6Ng01-113P22.g_69_1079

seq1  GAATTCAGACCTTATACCGAGCACATTAGCATAGATCTCAGAGCCTGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGACCTTATACCGAGCACATTAGCATAGATCTCAGAGCCTGGAG  50

seq1  AGCTGATAACTGGGGACTGGGGCTGTTGGGAAGAATAGGGAAGTGACTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGATAACTGGGGACTGGGGCTGTTGGGAAGAATAGGGAAGTGACTCA  100

seq1  CTGACCTTGGATCTGGTTTCCAGAAGGTGTCCCAGAGTAAGAAACATGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCTTGGATCTGGTTTCCAGAAGGTGTCCCAGAGTAAGAAACATGGG  150

seq1  GCCATTCTCAAGAGAAGTGGGTACACCTGGCTGCCTCAGTACAATCAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTCTCAAGAGAAGTGGGTACACCTGGCTGCCTCAGTACAATCAGTG  200

seq1  AGCTAAGAAGGAGATCTTGTACACTGGGGGTATTTTGGCCAAGCCACTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAGAAGGAGATCTTGTACACTGGGGGTATTTTGGCCAAGCCACTCT  250

seq1  CCTTGAGAGTGATGTCAATGTCTTTGGGAGCCACAGGGCTGGACACTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGAGAGTGATGTCAATGTCTTTGGGAGCCACAGGGCTGGACACTGAG  300

seq1  AAGTTCCTGGAGGATGGTAGTGAAGAAAAGGAACAATTCACTTCGGGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCCTGGAGGATGGTAGTGAAGAAAAGGAACAATTCACTTCGGGCAA  350

seq1  TGCCTTCTCCAAGACATATACGAGTTCCTGAGGGCACAGAAAATGAGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTCTCCAAGACATATACGAGTTCCTGAGGGCACAGAAAATGAGCCA  400

seq1  TGTGAGCCTCCACACAGTATACAAAATTTGGACTGTCCAATCCCTAAACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGCCTCCACACAGTATACAAAATTTGGACTGTCCAATCCCTAAACC  450

seq1  CATTTAGACTACTCTGACAATAGCAATGAGTAAGAATGAATTTAACCCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAGACTACTCTGACAATAGCAATGAGTAAGAATGAATTTAACCCTT  500

seq1  AATCTGCAATTCAATGGAGAATGTTTAGAGATTCTCAAACCTTAAAGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGCAATTCAATGGAGAATGTTTAGAGATTCTCAAACCTTAAAGAAT  550

seq1  TGGTGCAAGTGCCAGTGAGATGCCTTAGCAAGGTGTTTGTGTTCAATGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCAAGTGCCAGTGAGATGCCTTAGCAAGGTGTTTGTGTTCAATGTC  600

seq1  CCAGACCCACATGCTGGAAGAAGAGAATCAACTCAACAAGCTGTCTTCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACCCACATGCTGGAAGAAGAGAATCAACTCAACAAGCTGTCTTCCA  650

seq1  ACATAAAACTATATACACATACCATAAAACACATGATATAAATAAATCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAAACTATATACACATACCATAAAACACATGATATAAATAAATCAG  700

seq1  AAAATGAAGAATGGATAATTGGAGGATGCCTCATATTCAATTTTTTAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAAGAATGGATAATTGGAGGATGCCTCATATTCAATTTTTTAAAA  750

seq1  AAAATTTTAGCAACAATGTAACTTTTCCACATATG-TTTTTCCCTTTTTA  799
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AAAATTTTAGCAACAATGTAACTTTTCCACATATGTTTTTTCCCTTTTTA  800

seq1  TTAGATATTTTATTTATA-TTTCAAATGTTATCCCCTTTCCTAGTTTCCC  848
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TTAGATATTTTATTTATATTTTCAAATGTTATCCCCTTTCCTAGTTTCCC  850

seq1  CTCTGAAAATCCCCTATCCTCTCTCCCCCTCCTCCGC-TGCTCCACAACC  897
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CTCTGAAAATCCCCTATCCTCTCTCCCCCTCCTCCGCTTGCTCCACAACC  900

seq1  CACCAATTCCCACTTCCT-GGCCAAGGCATTCCCATATATT-GGGGCATA  945
      |||||||||||||||||| |||||||||||||||||||||| ||||||||
seq2  CACCAATTCCCACTTCCTGGGCCAAGGCATTCCCATATATTGGGGGCATA  950

seq1  GATCCC-TCACAGG-ATCCAAGGACCTATTTCCCCATTGATGACCAACTA  993
      | |||| ||||||| |||||||||||||||||||||||||||||| ||||
seq2  GTTCCCTTCACAGGAATCCAAGGACCTATTTCCCCATTGATGACCCACTA  1000

seq1  GG-CCATCCTC  1003
      || ||||||||
seq2  GGCCCATCCTC  1011