BAC Information

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BAC

Clone NameB6Ng01-115N21
Chromosome7 (Build37)
Map Location 145,055,556 - 145,056,595
singlet/doubletsinglet
Overlap genenone
Upstream geneMgmt, EG621804, Ebf3, 9430038I01Rik, Txnl2
Downstream geneLOC435235, Tcerg1l, LOC100043290, Mapk1ip1, Ppp2r2d
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115N21.bB6Ng01-115N21.g
ACCDH921022DH921023
length1,1721,042
definitionDH921022|Mus musculus domesticus DNA, BAC clone: B6Ng01-115N21, 5' end.DH921023|Mus musculus domesticus DNA, BAC clone: B6Ng01-115N21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaagaatatcgaatggctgagaagcccctaaaaaatgt
tcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagatt
ccacctcacaccagtcagaatggctaagatcaaaaatccaggtgatagca
gatgctggcaaagatgtggagaaagaagaatatgcttccgttgttggtgg
gattgcaagcttgtacagctattctggaaatcagtctggtggttcctcag
aaaattggacatagtactaccggaggatccaacaatacctctcctgagca
tatacccagaagatgttccaactggtaataagaacacatgattcactatg
ttcatagcagccttatttatgatagccagaagctggaaagaacccagatg
ttcctcaacagaagaatggttatagaaaatgtggtacatttacacaatgg
agtactactcagctattaaaaagaatgaatttatgaaattcctaggcaaa
tggatggatctggaaggtatcatcttgagtgaagtaacccaatcacaaaa
gaactcatatgatatgcactcactgataagtggatattaacccagaaact
tagaatacccaagatataatttgcaaatgacatgaaactcaagaaaaagg
aagagcaaagtgtggacactttgccccttctaagtattgggaacaaaaca
cccatggaaggagttacagagacaaagtttggagctgagatgaaaggatg
gaccatccagagactgccccacccagaggtccatccaataatcagccacc
aaacgtaggcactattgcatacaccagcaagatcttgctgaaaggaccct
gatgtagctgtctcttctgaggctatgccagtgcctagcaaacacagaaa
tggatgctcacagtcatctcttgggatagcacacagggccccaatggagg
agctagagaaagtacccaaaagctaaaggggtctgcaaccctataggtgg
aacaacatatgactaaccagtatccccagagctcgtgtctctagctgcat
ttatagcagaggatggcctagtcggcatcattggaaaagagccctggtct
ggcaaccttatatgccagtacaggaaaccaggcagatgtggaagtggggg
ttagaaagactagggtgtggct
gaattccatggcttaacttgtagctatttagaagaaatatagccgaaagc
tagccaaagcaaaccccggggcaataggctcttcttcctgtttcaaaggg
acagctacctgaggatcttaagcatactcgttcggaaagtgacaggcaca
cgggtgttctggggctgccatattggaggtggcctaataggctgcagatc
tacaggcagacccccccccccccccgtgctacctcctccagctcagcagc
agacagagcaagcacataactatctcacctctgtgtgcagcagtgcagca
gacaggctagaaccactctagagatggagtcagagggacacgaagagtgg
tggtgatattccctgggacagtaggcccacagccctataaaggaaggctg
agctgtcccaagtctctgctgtctctaccagcgggatggtgtgcacctga
gagaccacatcttctgactagggacagctccatcacaggcgtgctggctt
ttccttgagaaacacccacagagcttacaagtttcgttttaagattccct
gactgactagccgtggtttctgctttcacaattcacgttaggtcattttt
catttgacccgattttagtttttgatgaaacttatttttaggagctggag
acattgcttggtggctaagagctgtgactgctctcgcagagaggacccag
gttcagttcccagtgcctatgcgacagctggcaactatttgtaactccag
ttccacaagatccaacaccctcttttgacctctgtgggcacctagaatgc
atacatatatgctcatacacataaaatgaaaatagggtttttaaaaacag
actttaactaacctcaggaatataaaaccagagaacgccgcggtgagagg
gtgaccttgtttttagagaactacattgcatgatagtgtatctctctgga
taacaagaagaggtcagtgttcattaaagcaaaggaccaaaggaccactt
gagttccaaggtacagagccagaggggtcctggtgggttctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_145055556_145056595
seq2: B6Ng01-115N21.g_70_1111

seq1  GAATTCCATGGCTTAACTTGTAGCTATTTAGAAGAAATATAGCCGAAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGGCTTAACTTGTAGCTATTTAGAAGAAATATAGCCGAAAGC  50

seq1  TAGCCAAAGCAAACCCCGGGGCAATAGGCTCTTCTTCCTGTTTCAAAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCAAAGCAAACCCCGGGGCAATAGGCTCTTCTTCCTGTTTCAAAGGG  100

seq1  ACAGCTACCTGAGGATCTTAAGCATACTCGTTCGGAAAGTGACAGGCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTACCTGAGGATCTTAAGCATACTCGTTCGGAAAGTGACAGGCACA  150

seq1  CGGGTGTTCTGGGGCTGCCATATTGGAGGTGGCCTAATAGGCTGCAGATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGTGTTCTGGGGCTGCCATATTGGAGGTGGCCTAATAGGCTGCAGATC  200

seq1  TACAGGCAGACCCCCCCCCCCCCCCGTGCTACCTCCTCCAGCTCAGCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGCAGACCCCCCCCCCCCCCCGTGCTACCTCCTCCAGCTCAGCAGC  250

seq1  AGACAGAGCAAGCACATAACTATCTCACCTCTGTGTGCAGCAGTGCAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGAGCAAGCACATAACTATCTCACCTCTGTGTGCAGCAGTGCAGCA  300

seq1  GACAGGCTAGAACCACTCTAGAGATGGAGTCAGAGGGACACGAAGAGTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGCTAGAACCACTCTAGAGATGGAGTCAGAGGGACACGAAGAGTGG  350

seq1  TGGTGATATTCCCTGGGACAGTAGGCCCACAGCCCTATAAAGGAAGGCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGATATTCCCTGGGACAGTAGGCCCACAGCCCTATAAAGGAAGGCTG  400

seq1  AGCTGTCCCAAGTCTCTGCTGTCTCTACCAGCGGGATGGTGTGCACCTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTCCCAAGTCTCTGCTGTCTCTACCAGCGGGATGGTGTGCACCTGA  450

seq1  GAGACCACATCTTCTGACTAGGGACAGCTCCATCACAGGCGTGCTGGCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCACATCTTCTGACTAGGGACAGCTCCATCACAGGCGTGCTGGCTT  500

seq1  TTCCTTGAGAAACACCCACAGAGCTTACAAGTTTCGTTTTAAGATTCCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTGAGAAACACCCACAGAGCTTACAAGTTTCGTTTTAAGATTCCCT  550

seq1  GACTGACTAGCCGTGGTTTCTGCTTTCACAATTCACGTTAGGTCATTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGACTAGCCGTGGTTTCTGCTTTCACAATTCACGTTAGGTCATTTTT  600

seq1  CATTTGACCCGATTTTAGTTTTTGATGAAACTTATTTTTAGGAGCTGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGACCCGATTTTAGTTTTTGATGAAACTTATTTTTAGGAGCTGGAG  650

seq1  ACATTGCTTGGTGGCTAAGAGCTGTGACTGCTCTCGCAGAGAGGACCCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGCTTGGTGGCTAAGAGCTGTGACTGCTCTCGCAGAGAGGACCCAG  700

seq1  GTTCAGTTCCCAGTGCCTATGCGACAGCTGGCAACTATTTGTAACTCCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGTTCCCAGTGCCTATGCGACAGCTGGCAACTATTTGTAACTCCAG  750

seq1  TTCCACAAGATCCAACACCCTCTTTTGACCTCTGTGGGCACCTAGAATGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACAAGATCCAACACCCTCTTTTGACCTCTGTGGGCACCTAGAATGC  800

seq1  ATACATATATGCTCATACACATAAAATGAAAATA-GGTTTTTAAAAACAG  849
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ATACATATATGCTCATACACATAAAATGAAAATAGGGTTTTTAAAAACAG  850

seq1  ACTTTAACTAACCTCAGGAATATAAAAACCAGAGAACGCCGCGGTGAGAG  899
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ACTTTAACTAACCTCAGGAATAT-AAAACCAGAGAACGCCGCGGTGAGAG  899

seq1  GGTGACCTTGTTTTTAGAGAACTACATTGCATGATAGTGTATCTCTCTGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACCTTGTTTTTAGAGAACTACATTGCATGATAGTGTATCTCTCTGG  949

seq1  ATAACAAGAAGAGGTCAGTG-TCATTAAAGCAAAGGACCAAAGGACCAC-  997
      |||||||||||||||||||| |||||||||||||||||||||||||||| 
seq2  ATAACAAGAAGAGGTCAGTGTTCATTAAAGCAAAGGACCAAAGGACCACT  999

seq1  TGAGTTCCAAGGTAACAGAAGCCAGA-GGGTCCT-GTGGGTTCTT  1040
      ||||||||||||| |||| ||||||| ||||||| ||||||||||
seq2  TGAGTTCCAAGGT-ACAG-AGCCAGAGGGGTCCTGGTGGGTTCTT  1042