BAC Information

Click to search

BAC

Clone NameB6Ng01-118O20
Chromosome7 (Build37)
Map Location 100,995,290 - 100,996,404
singlet/doubletsinglet
Overlap genenone
Upstream gene4632434I11Rik, Prcp, A830059I20Rik, LOC100040298, LOC666783, EG638305
Downstream geneEG545982, EG666816
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-118O20.bB6Ng01-118O20.g
ACCDH923274DH923275
length1,1071,169
definitionDH923274|Mus musculus domesticus DNA, BAC clone: B6Ng01-118O20, 5' end.DH923275|Mus musculus domesticus DNA, BAC clone: B6Ng01-118O20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaggtctggctcgtccacttaccatcatcagtatcacctctactg
tgctctatctatctgatgctgtaccaagttgcaatagtaggtgcagttct
taccacactcttcaccattctcttaccacatccataaggtctttggtgtg
tactttctgatgtttaaccagaacagaacattgactaaaaccctcactga
actgattgcagtggtaaaatgtctctcctatgtgaaaactaaagtgacag
agaagcccagcattctgactgaagccttggccacaaatgctgcactggta
gtatttccctgccgcgtggtgtctatttctgaaagatgcttgaccacaga
gtgaatgtccttccacactcatcacatgcatcagactgctcacctgtgta
tattttctggtgctcaatgagaatagaattttgaatcaagttttttacac
atcagcacagatagaaggtctttccacttaagaacttaactgctgctttt
ccaatctgccctcctggtaatggtgtctcctcattcaggggcttgagtat
catcaccattccacattccagatgcttctgcaagatatttcatttcttta
gaaacctccttctttgaggctaaatcttcattccacgtattctcaacatc
agtctcctgaaccttacattcttctttcaggttactctgcggctgttctt
tcctgttttggaactggacaaaggtggcttatgggatgttcctgaagtca
gcacctcctcagactcttcttcttcatgattgtggtttgcaacctttcct
cctggtttgtccacttctcttccaagtcctctggaacagtcattgccttc
tcaccactcgcagagtggtgctctcactcaggcctggtgctcctcagaca
ggatgctccagtaccagcagtgccaggattgattctttttctgagtctta
gcagcagtcattggtagcagagctcctggattcctccaaagcctccctca
actcagggctttcctgttagcagactgcctgagtgttcttgtgaaagact
ctgtgtctgaagctatttcttccactggcaacttcagagtctgtattctc
cctagta
gaattctcacctgaggaatatcgaatggctgagaagcacctgaaaaaaat
aaatgttcaacatccttaatcatcagggaaatgcaaatcgaaacaaccct
gagattccacctcacaccagtcagaatgactaagatcaaaaattcaggtg
acagcagatgctggcaaggatgtggagaaagagaaacactcctctattta
tggtgggattgcaagcttgtacaatcactctggaaatcagtctagctgtt
cctcagaaaattggacatagtactaccggagaatcctacaatacctctcc
tggacatatatccagaagatgttccaactggtaagaaggacacatgctcc
actatgttcattgcagccttatttataatagccagaagttggaaagaacc
cagatgtccctcaacagaggaatgaatacagaaaatgttgtacatttaca
caatgcagtactactcagctattaaaaagaatgaatttacgaaattccta
ggcaaatggatggacctggagggcatcatcctgagtgaggtaacccaatc
acaaaagaactcacatgatatgtactcactgataagtggatattagccca
gaaacttagaatacccaagatacaagatacaacttgcaaaacacatgaaa
ctcaagaagaatgaagaccaaagtgtggacactttgcaccttcttagaat
tgggaacaaaaaacccatggtaggagttacagagacaacgtttggagctg
agatgaaaggatggaccatctagagactgccacacccggggatccatccc
ataatcagccttccaaatgctgacatcattgcatacaccagcatgatttt
gttgaaaggaccctgatatagctgtctcttgtgaggctatgccggggcct
ggcaaacacagaagtggatgctcacagtcagctattggatggaacacagc
cccaatgtgagctagagaaaatacccatgagctatgagtctgcaccctat
agtggacatcatatactacagtaccccagagctcacttctctagctgcat
atgtatcagtagatgctagtgcccatcatcggaagatgtcttgtctgcaa
cctttatgcctattatgaagaagtcaaggctgaaaatttgaatggtgtgt
ggttgagtgaggagcaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_100995290_100996404
seq2: B6Ng01-118O20.b_48_1154

seq1  GAATTCAGGTCTGGCTCGTCCACTTACCATCATCAGTATCACCTCTACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTCTGGCTCGTCCACTTACCATCATCAGTATCACCTCTACTG  50

seq1  TGCTCTATCTATCTGATGCTGTACCAAGTTGCAATAGTAGGTGCAGTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTATCTATCTGATGCTGTACCAAGTTGCAATAGTAGGTGCAGTTCT  100

seq1  TACCACACTCTTCACCATTCTCTTACCACATCCATAAGGTCTTTGGTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCACACTCTTCACCATTCTCTTACCACATCCATAAGGTCTTTGGTGTG  150

seq1  TACTTTCTGATGTTTAACCAGAACAGAACATTGACTAAAACCCTCACTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTCTGATGTTTAACCAGAACAGAACATTGACTAAAACCCTCACTGA  200

seq1  ACTGATTGCAGTGGTAAAATGTCTCTCCTATGTGAAAACTAAAGTGACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATTGCAGTGGTAAAATGTCTCTCCTATGTGAAAACTAAAGTGACAG  250

seq1  AGAAGCCCAGCATTCTGACTGAAGCCTTGGCCACAAATGCTGCACTGGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCCCAGCATTCTGACTGAAGCCTTGGCCACAAATGCTGCACTGGTA  300

seq1  GTATTTCCCTGCCGCGTGGTGTCTATTTCTGAAAGATGCTTGACCACAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTCCCTGCCGCGTGGTGTCTATTTCTGAAAGATGCTTGACCACAGA  350

seq1  GTGAATGTCCTTCCACACTCATCACATGCATCAGACTGCTCACCTGTGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATGTCCTTCCACACTCATCACATGCATCAGACTGCTCACCTGTGTA  400

seq1  TATTTTCTGGTGCTCAATGAGAATAGAATTTTGAATCAAGTTTTTTACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCTGGTGCTCAATGAGAATAGAATTTTGAATCAAGTTTTTTACAC  450

seq1  ATCAGCACAGATAGAAGGTCTTTCCACTTAAGAACTTAACTGCTGCTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCACAGATAGAAGGTCTTTCCACTTAAGAACTTAACTGCTGCTTTT  500

seq1  CCAATCTGCCCTCCTGGTAATGGTGTCTCCTCATTCAGGGGCTTGAGTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATCTGCCCTCCTGGTAATGGTGTCTCCTCATTCAGGGGCTTGAGTAT  550

seq1  CATCACCATTCCACATTCCAGATGCTTCTGCAAGATATTTCATTTCTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACCATTCCACATTCCAGATGCTTCTGCAAGATATTTCATTTCTTTA  600

seq1  GAAACCTCCTTCTTTGAGGCTAAATCTTCATTCCACGTATTCTCAACATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCTCCTTCTTTGAGGCTAAATCTTCATTCCACGTATTCTCAACATC  650

seq1  AGTCTCCTGAACCTTACATTCTTCTTTCAGGTTACTCTGCGGCTGTTCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCCTGAACCTTACATTCTTCTTTCAGGTTACTCTGCGGCTGTTCTT  700

seq1  TCCTGTTTTGGAACTGGACAAAGGTGGCTTATGGGATGTTCCTGAAGTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTTTTGGAACTGGACAAAGGTGGCTTATGGGATGTTCCTGAAGTCA  750

seq1  GCACCTCCTCAGACTCTTCTTCTTCATGATTGTGGTTTGCAACCTTTCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTCCTCAGACTCTTCTTCTTCATGATTGTGGTTTGCAACCTTTCCT  800

seq1  CCTGGTTTGTCCACTTCTCTTCCAAGTCCTCTGGAACAGTCATTGCCTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTTTGTCCACTTCTCTTCCAAGTCCTCTGGAACAGTCATTGCCTTC  850

seq1  TCACCACTCGCAGAGTGGTGCTCTCACTCAGGCCTGGTGCTCCTCAGACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCACTCGCAGAGTGGTGCTCTCACTCAGGCCTGGTGCTCCTCAGACA  900

seq1  GGATGCTCCAGTACCAGCAGTGCCAGGATTGATTCTTTTTCTGAGTCTTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCTCCAGTACCAGCAGTGCCAGGATTGATTCTTTTTCTGAGTCTTA  950

seq1  GGCAGCAGTCATTGGTAGCAGAGCTCCTGGATTCCTCCAAAAGCCTCCCT  1000
       ||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  -GCAGCAGTCATTGGTAGCAGAGCTCCTGGATTCCTCC-AAAGCCTCCCT  998

seq1  CAACTCAAGGGCTTCCTGGTAGCAGAACTGCCTGAAGTGT--CTGTGAAA  1048
      ||||||| ||  |||||| |||||| |||||||| |||||   |||||||
seq2  CAACTCAGGGCTTTCCTGTTAGCAG-ACTGCCTG-AGTGTTCTTGTGAAA  1046

seq1  GAACTCTGTGGTCTGAAGGCTATTTCTCCACCTGGCAAACTTTCAGAAGT  1098
      | ||||||| ||||||| ||||||||| |  |||||||   ||||| |||
seq2  G-ACTCTGT-GTCTGAA-GCTATTTCTTCCACTGGCAA--CTTCAG-AGT  1090

seq1  CCTGTA-TCTCCCTAGTA  1115
       ||||| |||||||||||
seq2  -CTGTATTCTCCCTAGTA  1107