BAC Information

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BAC

Clone NameB6Ng01-119E03
Chromosome7 (Build37)
Map Location 54,701,069 - 54,701,439
singlet/doubletsinglet
Overlap geneLOC668727
Upstream geneSergef, Tph1, Saal1, Saa3, Saa4, LOC100040106, Saa1, Saa2, Hps5, Gtf2h1, EG668838, EG384622, Ldha, Ldhc, Tsg101, Uevld, C86187, LOC384623, ENSMUSG00000056509, Spty2d1, LOC100040174, Tmem86a, Ptpn5, LOC100041710, Mrgpra6, EG668725, Gm660, Mrgpra1, LOC668846, LOC100040217
Downstream geneMrgpra2, LOC638950, Mrgprc4-ps, LOC677457, EG668729, Mrgpra3, Mrgprc1-ps, LOC100040314, Mrgprc3-ps, EG435977, EG619792, Mrgprc7-ps, Mrgpra18-ps, EG435978, Mrgprc2-ps, Mrgpra4, Mrgprx1, Mrgprb7-ps, Mrgprb12-ps, EG270335, Mrgprb5, Mrgprb4, Mrgprb13, Mrgprb8, Mrgprb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-119E03.bB6Ng01-119E03.g
ACCDH923521DH923522
length3711,165
definitionDH923521|Mus musculus domesticus DNA, BAC clone: B6Ng01-119E03, 5' end.DH923522|Mus musculus domesticus DNA, BAC clone: B6Ng01-119E03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
taaaatgcagaaacacatggtcttacagctatgtacttgataaaaagaaa
cataggaagtctggatgtctctcataccaaccaagattgctttgaaacaa
tactattccttgaaagtgacagattagtaaataaccccctcccacacatg
ggcacaactaagcaattcatggccacccactgagcaccactgatctccca
agagatcctacacatttgaggaagaaagatagctccacacaccagagccc
tgcaggaaaggaggaatacatattacacaagaggaatagaagaagtgttt
ggaagttagtaagagtaatgtattatgtaaaccagaaagcttgaaagatg
aatttgtgtgtgtgtgtgtgt
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggagatcagtctggcggttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaagatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctggccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taagatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtgaacactatgcccctccttagaagtgggag
caaaacacccttggaaggagttacagagacaaagtttggagttgagataa
aaggatggaccatgtagacactaccatatccggggatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcaagattatgctgaaa
ggaccctgatatagctgtctcttgtcagagtatgcctgggcctagcaaac
atagaagtggatgctcacagtcggctattggatggatcacatgggcccca
tgaaggagctagagaaagtaccaaagaagctaaaggatctgcaccctata
ggtggaacaacattatgactatcagtaccccgagctcttatctcttagct
gcatatgcatcaaagatggcctagtcgcatcactggcaagagagtccatg
gaacccgcactttattgccagtaagggacgccagggccataaaggggatg
gtggggtaggggaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_54701069_54701439
seq2: B6Ng01-119E03.b_50_420

seq1  TAAAATGCAGAAACACATGGTCTTACAGCTATGTACTTGATAAAAAGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGCAGAAACACATGGTCTTACAGCTATGTACTTGATAAAAAGAAA  50

seq1  CATAGGAAGTCTGGATGTCTCTCATACCAACCAAGATTGCTTTGAAACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGAAGTCTGGATGTCTCTCATACCAACCAAGATTGCTTTGAAACAA  100

seq1  TACTATTCCTTGAAAGTGACAGATTAGTAAATAACCCCCTCCCACACATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATTCCTTGAAAGTGACAGATTAGTAAATAACCCCCTCCCACACATG  150

seq1  GGCACAACTAAGCAATTCATGGCCACCCACTGAGCACCACTGATCTCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACAACTAAGCAATTCATGGCCACCCACTGAGCACCACTGATCTCCCA  200

seq1  AGAGATCCTACACATTTGAGGAAGAAAGATAGCTCCACACACCAGAGCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATCCTACACATTTGAGGAAGAAAGATAGCTCCACACACCAGAGCCC  250

seq1  TGCAGGAAAGGAGGAATACATATTACACAAGAGGAATAGAAGAAGTGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGAAAGGAGGAATACATATTACACAAGAGGAATAGAAGAAGTGTTT  300

seq1  GGAAGTTAGTAAGAGTAATGTATTATGTAAACCAGAAAGCTTGAAAGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTTAGTAAGAGTAATGTATTATGTAAACCAGAAAGCTTGAAAGATG  350

seq1  AATTTGTGTGTGTGTGTGTGT  371
      |||||||||||||||||||||
seq2  AATTTGTGTGTGTGTGTGTGT  371