BAC Information

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BAC

Clone NameB6Ng01-120N09
Chromosome7 (Build37)
Map Location 120,119,982 - 120,285,607
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100042678, Usp47, Dkk3, Mical2, Micalcl, Parva, LOC627808, Tead1, 4632411J06Rik, LOC434227
Downstream geneArntl, A630005I04Rik, Btbd10, Pth, LOC100042736, Mlstd2, EG434228, Spon1, Rras2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120N09.bB6Ng01-120N09.g
ACCDH924674DH924675
length950585
definitionDH924674|Mus musculus domesticus DNA, BAC clone: B6Ng01-120N09, 5' end.DH924675|Mus musculus domesticus DNA, BAC clone: B6Ng01-120N09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,285,041 - 120,285,607)(120,119,982 - 120,120,564)
sequence
gaattcatcctactactctgttgccaggcaacctttcttgcttttgactc
ttgtaccaatgctacttgttgccatggcagtgctgggacaaggagcagta
agttgtaattaagcggcaagctaggagaaaggggcttttatgtccttgtg
tgggggtggacaggagaaaaagctcctggcactgcagtcaaggtgcaaag
agggacacgggaaagagcaggttggtggctggggcaggtgctcgtcataa
ccatcactgaaaactgtgtgtgctggtgagtttttgtcaccttgacacgc
actagcatcacctgagaagagggaacttcagttgagggattgcctctatc
acattgacatgtctgtgggtattttcatgattaactattgatgtgggagg
gcccagcccactgtgggcagtaccacctcttggcaaatggtcctaggttg
tgtaagaaaggaaacagagaaagacgcagggaaaccagtaggcagcgttt
ctctgtcttctttgctttacctcctgcctccaggttcctaccttgagttc
ctgccctgacttccctcagtgatgaactgtgacccataagccaaataatc
cctttcccctccctacgttgcttttagtcagtgttttgtcacagccacaa
accagaaaggagaataccgtgttttcccagggatgctgtccttgcccaca
tcttgtcttgtcaaggatgggtgttcaaggctgggaggtggctcagtgag
gagagtgtgacacacatgcaagagaacctggattcagatcccagaatcca
tctcaaagctgcgtgtggtacatatctacaatcccagcactgggggttaa
gggtggaatcagtcatttcagagttaattggccagccaatcttagctgga
tctgtggagtgtcaaattcaatagagactgttttaaaaaaagagatggaa

gaattctcttcaatggcttcctgtttatgatgttattttgggggtggggt
aggctggaggtagatactgtcaccaaagcctgctatgtttctctttctca
actgtgcacctgtactgatcaatgccaccgtgaaaggagcttcctttgtc
tttacagtcagagggagcatggagcatgggcttctacactgcttctggtg
acagcaaagaccacaaacatggggccatggacccagatagagcttttgga
ggcagcacggaccctggcatcacctcagttggcagcgcaggcctctcaca
tcaatatggccccaggcggcagcactgcctgagtatgacttcaggttgtg
gcatagatgaaggacatcctaatgatgttaggtggtaatacagccacgga
catcaacctggatcctgactgtatcaggaccactgatccacaccctcatc
aatatcacagaccacagttggtcctttgaggaggaccaatgcagaaagtg
agccattctttatcctgaaacctctgtcattgcccagacccctgtgatcc
cgaggcagcatggtggtatgttggggtgggggtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_120285041_120285607
seq2: B6Ng01-120N09.b_49_615 (reverse)

seq1  GAGGGAAGTCAGGGCAGGAACTCAAGGTAGGAACCTGGAGGCAGGAGGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAAGTCAGGGCAGGAACTCAAGGTAGGAACCTGGAGGCAGGAGGTA  50

seq1  AAGCAAAGAAGACAGAGAAACGCTGCCTACTGGTTTCCCTGCGTCTTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAAGAAGACAGAGAAACGCTGCCTACTGGTTTCCCTGCGTCTTTCT  100

seq1  CTGTTTCCTTTCTTACACAACCTAGGACCATTTGCCAAGAGGTGGTACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTCCTTTCTTACACAACCTAGGACCATTTGCCAAGAGGTGGTACTG  150

seq1  CCCACAGTGGGCTGGGCCCTCCCACATCAATAGTTAATCATGAAAATACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAGTGGGCTGGGCCCTCCCACATCAATAGTTAATCATGAAAATACC  200

seq1  CACAGACATGTCAATGTGATAGAGGCAATCCCTCAACTGAAGTTCCCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGACATGTCAATGTGATAGAGGCAATCCCTCAACTGAAGTTCCCTCT  250

seq1  TCTCAGGTGATGCTAGTGCGTGTCAAGGTGACAAAAACTCACCAGCACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGGTGATGCTAGTGCGTGTCAAGGTGACAAAAACTCACCAGCACAC  300

seq1  ACAGTTTTCAGTGATGGTTATGACGAGCACCTGCCCCAGCCACCAACCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTTTCAGTGATGGTTATGACGAGCACCTGCCCCAGCCACCAACCTG  350

seq1  CTCTTTCCCGTGTCCCTCTTTGCACCTTGACTGCAGTGCCAGGAGCTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTCCCGTGTCCCTCTTTGCACCTTGACTGCAGTGCCAGGAGCTTTT  400

seq1  TCTCCTGTCCACCCCCACACAAGGACATAAAAGCCCCTTTCTCCTAGCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTGTCCACCCCCACACAAGGACATAAAAGCCCCTTTCTCCTAGCTT  450

seq1  GCCGCTTAATTACAACTTACTGCTCCTTGTCCCAGCACTGCCATGGCAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGCTTAATTACAACTTACTGCTCCTTGTCCCAGCACTGCCATGGCAAC  500

seq1  AAGTAGCATTGGTACAAGAGTCAAAAGCAAGAAAGGTTGCCTGGCAACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGCATTGGTACAAGAGTCAAAAGCAAGAAAGGTTGCCTGGCAACAG  550

seq1  AGTAGTAGGATGAATTC  567
      |||||||||||||||||
seq2  AGTAGTAGGATGAATTC  567

seq1: chr7_120119982_120120564
seq2: B6Ng01-120N09.g_68_651

seq1  GAATTCTCTTCAATGGCTTCCTGTTTATGATGTTATTTTGGGGGTGGGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTCAATGGCTTCCTGTTTATGATGTTATTTTGGGGGTGGGGT  50

seq1  AGGCTGGAGGTAGATACTGTCACCAAAGCCTGCTATGTTTCTCTTTCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGGAGGTAGATACTGTCACCAAAGCCTGCTATGTTTCTCTTTCTCA  100

seq1  ACTGTGCACCTGTACTGATCAATGCCACCGTGAAAGGAGCTTCCTTTGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGCACCTGTACTGATCAATGCCACCGTGAAAGGAGCTTCCTTTGTC  150

seq1  TTTACAGTCAGAGGGAGCATGGAGCATGGGCTTCTACACTGCTTCTGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAGTCAGAGGGAGCATGGAGCATGGGCTTCTACACTGCTTCTGGTG  200

seq1  ACAGCAAAGACCACAAACATGGGGCCATGGACCCAGATAGAGCTTTTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAAAGACCACAAACATGGGGCCATGGACCCAGATAGAGCTTTTGGA  250

seq1  GGCAGCACGGACCCTGGCATCACCTCAGTTGGCAGCGCAGGCCTCTCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCACGGACCCTGGCATCACCTCAGTTGGCAGCGCAGGCCTCTCACA  300

seq1  TCAATATGGCCCCAGGCGGCAGCACTGCCTGAGTATGACTTCAGGTTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATATGGCCCCAGGCGGCAGCACTGCCTGAGTATGACTTCAGGTTGTG  350

seq1  GCATAGATGAAGGACATCCTAATGATGTTAGGTGGTAATACAGCCACGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGATGAAGGACATCCTAATGATGTTAGGTGGTAATACAGCCACGGA  400

seq1  CATCAACCTGGATCCTGACTGTATCAGGACCACTGATCCACACCCTCATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAACCTGGATCCTGACTGTATCAGGACCACTGATCCACACCCTCATC  450

seq1  AATATCACAGACCACAGTTGGTCCTTTGAGGAGGACCAATGCAGAAAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCACAGACCACAGTTGGTCCTTTGAGGAGGACCAATGCAGAAAGTG  500

seq1  AGCCATTCTTTATCCTG-AACCTCTGTCATTGCCCAGACCCCTGTGATCC  549
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AGCCATTCTTTATCCTGAAACCTCTGTCATTGCCCAGACCCCTGTGATCC  550

seq1  CGAGGCAGCATGGTGGTATGTTGGGGTGGGGGTG  583
      ||||||||||||||||||||||||||||||||||
seq2  CGAGGCAGCATGGTGGTATGTTGGGGTGGGGGTG  584