BAC Information

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BAC

Clone NameB6Ng01-120N17
Chromosome7 (Build37)
Map Location 111,705,895 - 111,706,861
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr615, Olfr616, LOC100042167, Olfr617, Olfr618, Olfr619, Olfr620, LOC667639, Olfr622, Olfr623, Olfr624, Olfr625-ps1, Olfr261-ps1, Olfr260-ps1, Olfr627, Olfr1526-ps1, Olfr629, Olfr630, Olfr69, Olfr68, Olfr67, Hbb-b1, EG436003, Hbb-bh1, Hbb-y, Olfr66, Olfr64, Olfr65, Olfr631, Olfr632, Olfr633, Olfr634-ps1, LOC233614, Olfr635, Olfr636-ps1, Olfr637-ps1, Olfr638, Olfr639, Olfr640, Olfr641, Olfr642, Olfr643, Olfr644, Olfr645, Olfr646, 4931431F19Rik, Ubqln3, Ubqlnl, E030002O03Rik, Olfr647-ps1, Olfr648, Olfr649, Olfr650-ps1, Trim6, LOC667497, EG667823, Trim12, Trim34, 9230105E10Rik, A530023O14Rik, EG434219, LOC100041595, Trim30, AI451617, LOC672495, LOC625305, EG625321, Olfr651
Downstream geneOlfr652, Olfr653, Olfr654, Olfr655, Olfr656, Olfr657, Olfr658, LOC667882, Olfr659, GA_x5J8B7W3SPQ-80592-80214, Olfr661, LOC625495, Olfr662-ps1, Olfr663, Olfr664, EG625530, LOC100042613, LOC233637, Dub1a, Dub1, Olfr665, Olfr666, Olfr667, Olfr668, Olfr669, EG545987, Olfr670, Olfr671, Olfr672, GA_x5J8B7W6B6J-189947-189022, Olfr674-ps1, Olfr675, Olfr676, Olfr677, LOC667987, Olfr678, Olfr679, Olfr680-ps1, Olfr681, Olfr682-ps1, Olfr683, Olfr684, Olfr685, Olfr686, EG668035, Olfr688, Olfr689, Olfr690, Olfr691, Olfr692, EG545989, 4632419K20Rik, Cnga4, EG244189, Cckbr, Prkcdbp, Smpd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120N17.bB6Ng01-120N17.g
ACCDH924690DH924691
length1,092969
definitionDH924690|Mus musculus domesticus DNA, BAC clone: B6Ng01-120N17, 5' end.DH924691|Mus musculus domesticus DNA, BAC clone: B6Ng01-120N17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaagacttttatcatgaatgggtgttggattttg
tcaaatgctgtctcagcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatatactggattacattgatgaatttctgtatattgaacc
atccctgcatccctgggatgaaacctacttggtcaggatggacggttgtt
ttgatgtgttcttggattcaattagcgagaactttattgagtatttttgc
atctatattcataagggaaataggtgtgaagttctctatctttgttgggt
cattttgtggtttaggtatcagagtaattgtggcttcatagaatgtgttg
ggtagagtaccttctgcttctattttgtagaatagtttgtgaagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagaccattaatgactgtttctatttct
ttaggggatataggattgtttacatcattaacctgagattgatttaactt
tggtacctggtatctgtctagaaacttgtgcatttcctccaggttctcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctcttgttatgtctcccttttcatttctgattttgttaat
taggatgcgttccctgtgtcctctagtgagtctggctaagggtttattta
tcttgttgattttcccaaagaaccagctcctcgattggttgattctttga
atagttcttctttttccacttgggttgatttcgcccctgagtttgattat
ttccttgctgtctactccctcttgggtgaatttgcttccttttgttccag
agtttttagtgtgttgtcaagctgctatgtgtgcttctctctagttcttt
taggaggcactcagagctatgagttttctctagaattgctttcattgtgt
cccataagttgggttgtgtggcttcttttcattaaacttcaaaagcctaa
ttctttctaattcctccttgacaagatcatggaaattggtgt
gaattctctgtgattccattctctggtattcatactgctctaaattctgt
gccctggatcactgtacttttaaggcattcttgtggccccttagatttca
catttaggacttcagtgaaatgattatgagtgtattgagttttaagattc
tatacagtcattgagaacaggtaagacaagcctacttctttatactactc
acctcatcacttccaatattcctggtattcagtgaacagtgagtacgtgt
ttgccttatcaaatgcttcaaaatgactattagttaatgagaaaaacctg
tatttttcaggaaaattgtttgcttggactcattagtcagtctacagagt
cagaaaacttgggagactcataataaaatattttccacccagatattggt
gataattgttatcacacataatacttggaatttctctctatgtttaatat
ttgtttatttattttgtgcagtctttgagacagagtcttgttatgcatca
cagactagccttgaactatttaagtagctcaggctagttttgaactcata
atcttcctgtctcaggctcctctgctgggattacaggtgtgtgccaccat
gtctgactctggaacttgtctttaaatatttccaaattatctttatacgt
tcacatgtgtgaaaactgattactgtagcacttacacattgtcatgctgt
gctaaggacagggagaacagagcaagaactaaattccagctctggacttc
atatatagatttccttcttggattgagaggatatgtgaaagaattccctg
ctggaaaggactaaactgaacactggggctgggtatttatggcttttgag
cctgaattttatctgtatgagagacttactccacagaaatgggttactac
ccttttctcttacaaatgggctcaccaaagttagttgttgatttacgaat
gggggggaggattgggaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_111705895_111706861
seq2: B6Ng01-120N17.g_69_1037

seq1  GAATTCTCTGTGATTCCATTCTCTGGTATTCATACTGCTCTAAATTCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTGATTCCATTCTCTGGTATTCATACTGCTCTAAATTCTGT  50

seq1  GCCCTGGATCACTGTACTTTTAAGGCATTCTTGTGGCCCCTTAGATTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGGATCACTGTACTTTTAAGGCATTCTTGTGGCCCCTTAGATTTCA  100

seq1  CATTTAGGACTTCAGTGAAATGATTATGAGTGTATTGAGTTTTAAGATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAGGACTTCAGTGAAATGATTATGAGTGTATTGAGTTTTAAGATTC  150

seq1  TATACAGTCATTGAGAACAGGTAAGACAAGCCTACTTCTTTATACTACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAGTCATTGAGAACAGGTAAGACAAGCCTACTTCTTTATACTACTC  200

seq1  ACCTCATCACTTCCAATATTCCTGGTATTCAGTGAACAGTGAGTACGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCATCACTTCCAATATTCCTGGTATTCAGTGAACAGTGAGTACGTGT  250

seq1  TTGCCTTATCAAATGCTTCAAAATGACTATTAGTTAATGAGAAAAACCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTTATCAAATGCTTCAAAATGACTATTAGTTAATGAGAAAAACCTG  300

seq1  TATTTTTCAGGAAAATTGTTTGCTTGGACTCATTAGTCAGTCTACAGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTCAGGAAAATTGTTTGCTTGGACTCATTAGTCAGTCTACAGAGT  350

seq1  CAGAAAACTTGGGAGACTCATAATAAAATATTTTCCACCCAGATATTGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAACTTGGGAGACTCATAATAAAATATTTTCCACCCAGATATTGGT  400

seq1  GATAATTGTTATCACACATAATACTTGGAATTTCTCTCTATGTTTAATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATTGTTATCACACATAATACTTGGAATTTCTCTCTATGTTTAATAT  450

seq1  TTGTTTATTTATTTTGTGCAGTCTTTGAGACAGAGTCTTGTTATGCATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTATTTATTTTGTGCAGTCTTTGAGACAGAGTCTTGTTATGCATCA  500

seq1  CAGACTAGCCTTGAACTATTTAAGTAGCTCAGGCTAGTTTTGAACTCATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTAGCCTTGAACTATTTAAGTAGCTCAGGCTAGTTTTGAACTCATA  550

seq1  ATCTTCCTGTCTCAGGCTCCTCTGCTGGGATTACAGGTGTGTGCCACCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCCTGTCTCAGGCTCCTCTGCTGGGATTACAGGTGTGTGCCACCAT  600

seq1  GTCTGACTCTGGAACTTGTCTTTAAATATTTCCAAATTATCTTTATACGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGACTCTGGAACTTGTCTTTAAATATTTCCAAATTATCTTTATACGT  650

seq1  TCACATGTGTGAAAACTGATTACTGTAGCACTTACACATTGTCATGCTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATGTGTGAAAACTGATTACTGTAGCACTTACACATTGTCATGCTGT  700

seq1  GCTAAGGACAGGGAGAACAGAGCAAGAACTAAATTCCAGCTCTGGACTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGGACAGGGAGAACAGAGCAAGAACTAAATTCCAGCTCTGGACTTC  750

seq1  ATATATAGATTTCCTTCTTGGATTGAGAGGATATGTGAAAGAATTCCCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATAGATTTCCTTCTTGGATTGAGAGGATATGTGAAAGAATTCCCTG  800

seq1  CTGG-AAGGACTAAACTGAACACTGGGGCTGGGTATTTATGGCTTTTGAG  849
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAAGGACTAAACTGAACACTGGGGCTGGGTATTTATGGCTTTTGAG  850

seq1  CCTGAATTTTATCTGTATGAGAGACTTACTCCACAGAAATGGGTTACTAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAATTTTATCTGTATGAGAGACTTACTCCACAGAAATGGGTTACTAC  900

seq1  CCTATTCTCTTACAAATGGGCTCAACCAAAGTTAG-TGTTGATTTACCAA  948
      ||| ||||||||||||||||||| ||||||||||| ||||||||||| ||
seq2  CCTTTTCTCTTACAAATGGGCTC-ACCAAAGTTAGTTGTTGATTTACGAA  949

seq1  ATGGGGGGAGGA-TGGGAGA  967
        |||||||||| |||||||
seq2  TGGGGGGGAGGATTGGGAGA  969