BAC Information

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BAC

Clone NameB6Ng01-123J01
Chromosome7 (Build37)
Map Location 124,319,276 - 124,473,750
singlet/doubletdoublet
Overlap genenone
Upstream genePlekha7, Rps13, Pik3c2a, LOC100042798, Nucb2, LOC100043320, EG668484, LOC668485, LOC546993, LOC100043330
Downstream geneXylt1, LOC669758, Rps15a, Arl6ip1, 2610207I05Rik, LOC100043339
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123J01.bB6Ng01-123J01.g
ACCDH926698DH926699
length1,176104
definitionDH926698|Mus musculus domesticus DNA, BAC clone: B6Ng01-123J01, 5' end.DH926699|Mus musculus domesticus DNA, BAC clone: B6Ng01-123J01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(124,319,276 - 124,320,472)(124,473,647 - 124,473,750)
sequence
gaattcaattctggtgtccagagggtgatatcctggtgtcctgatatttg
aaacttcccttgaagcatctgtctctgttaggttttccagtccctatgac
ctcttgacatcccctttcatctctgaatcttgacagtgatttctagaaga
acaagccatggatctctaaggagaagaaatctaggagaaaaaatgtgcct
gcgagagtggattctgcacacgtgtctccatgaactaactgcttaccagc
agaagtgagaagtcaggcttttcctggtatctgattttctggtgccacag
gaaagaccaaatgcataattctacagggacctaagaaatctttgtccctt
tcataagggtggacctgctcatgtccccatttctgcctgaagttgcagct
gcagggacctacatggtgtttgcccctttaataagattgaacctgctccg
gtcaccttcccttcctatactgatgacttatgctccatgtctccactaga
gtttttggtctccaagttcagactttgtgtgccacagaaaccaacttctg
ctactaggagagatgtccacaggttttaagggtgtgcctagaaaagtcgt
aacctacaagaccaggtgtggtggtttgaatatgcttggccccggggagt
ggcactctttggacttgtggccttgttagaggatgtatgtcattgtgggt
gtgggcttttgagagctttctcccagcttcctgaggatgacagtgttttt
cctgtttgccttccgaacaagatgtagaactctcagttccttctccagca
ccatggctgcatgggtgctgccatgttcccacctttgatgatacaggact
gaacgtctgaacttgaaagccagccccaattaaatgttgtccctataaaa
gttaccttggtcatggtgtctgtgcacagcaataaaccctgactagacac
aggcttagggattagagtcgtttatatgaatcccatagaaagaaaaccac
tagtgttttgtttgctttgtttgattaaacaaaaacaaaaaacccctgct
cagaacccatgttggagttatagggaaacagaatggctctgctgcagcat
gctattggtcacaagcacattttcaggtctcgctccttcaatttaaaacc
cataggtctgaattctcaaatagaag
cctcttcagtaagccttccacccttcatacactctagtacccccaaggtc
atacacatctcagacagagtggtagataactgtcagggaggggagggggg
agag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_124319276_124320472
seq2: B6Ng01-123J01.b_50_1225

seq1  GAATTCAATTCTGGTGTCCAGAGGGTGATATCCTGGTGTCCTGATATTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTCTGGTGTCCAGAGGGTGATATCCTGGTGTCCTGATATTTG  50

seq1  AAACTTCCCTTGAAGCATCTGTCTCTGTTAGGTTTTCCAGTCCCTATGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTCCCTTGAAGCATCTGTCTCTGTTAGGTTTTCCAGTCCCTATGAC  100

seq1  CTCTTGACATCCCCTTTCATCTCTGAATCTTGACAGTGATTTCTAGAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGACATCCCCTTTCATCTCTGAATCTTGACAGTGATTTCTAGAAGA  150

seq1  ACAAGCCATGGATCTCTAAGGAGAAGAAATCTAGGAGAAAAAATGTGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCCATGGATCTCTAAGGAGAAGAAATCTAGGAGAAAAAATGTGCCT  200

seq1  GCGAGAGTGGATTCTGCACACGTGTCTCCATGAACTAACTGCTTACCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAGAGTGGATTCTGCACACGTGTCTCCATGAACTAACTGCTTACCAGC  250

seq1  AGAAGTGAGAAGTCAGGCTTTTCCTGGTATCTGATTTTCTGGTGCCACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTGAGAAGTCAGGCTTTTCCTGGTATCTGATTTTCTGGTGCCACAG  300

seq1  GAAAGACCAAATGCATAATTCTACAGGGACCTAAGAAATCTTTGTCCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGACCAAATGCATAATTCTACAGGGACCTAAGAAATCTTTGTCCCTT  350

seq1  TCATAAGGGTGGACCTGCTCATGTCCCCATTTCTGCCTGAAGTTGCAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAGGGTGGACCTGCTCATGTCCCCATTTCTGCCTGAAGTTGCAGCT  400

seq1  GCAGGGACCTACATGGTGTTTGCCCCTTTAATAAGATTGAACCTGCTCCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGACCTACATGGTGTTTGCCCCTTTAATAAGATTGAACCTGCTCCG  450

seq1  GTCACCTTCCCTTCCTATACTGATGACTTATGCTCCATGTCTCCACTAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCTTCCCTTCCTATACTGATGACTTATGCTCCATGTCTCCACTAGA  500

seq1  GTTTTTGGTCTCCAAGTTCAGACTTTGTGTGCCACAGAAACCAACTTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGGTCTCCAAGTTCAGACTTTGTGTGCCACAGAAACCAACTTCTG  550

seq1  CTACTAGGAGAGATGTCCACAGGTTTTAAGGGTGTGCCTAGAAAAGTCGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTAGGAGAGATGTCCACAGGTTTTAAGGGTGTGCCTAGAAAAGTCGT  600

seq1  AACCTACAAGACCAGGTGTGGTGGTTTGAATATGCTTGGCCCCGGGGAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTACAAGACCAGGTGTGGTGGTTTGAATATGCTTGGCCCCGGGGAGT  650

seq1  GGCACTCTTTGGACTTGTGGCCTTGTTAGAGGATGTATGTCATTGTGGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTCTTTGGACTTGTGGCCTTGTTAGAGGATGTATGTCATTGTGGGT  700

seq1  GTGGGC-TTTGAGAGCTTTCTCCCAGCTTCCTGAGGATGACAGTGTTTTT  749
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGCTTTTGAGAGCTTTCTCCCAGCTTCCTGAGGATGACAGTGTTTTT  750

seq1  CCTGTTTGCCTTCCGAACAAGATGTAGAACTCTCAGTTCCTTCTCCAGCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTTGCCTTCCGAACAAGATGTAGAACTCTCAGTTCCTTCTCCAGCA  800

seq1  CCATGGCTGCATGGGTGCTGCCATGTTCCCACC-TTGATGATACAGGACT  848
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CCATGGCTGCATGGGTGCTGCCATGTTCCCACCTTTGATGATACAGGACT  850

seq1  GAACGTCTGAACTTGAAAGCCAGCCCCAATTAAATGTTGT-CCTATAAAA  897
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GAACGTCTGAACTTGAAAGCCAGCCCCAATTAAATGTTGTCCCTATAAAA  900

seq1  GTTACCTTGGTCATGGTGTCTGTGCACAGCAATAAAACCCTGACTAAGAC  947
      ||||||||||||||||||||||||||||||||| ||||||||||| ||||
seq2  GTTACCTTGGTCATGGTGTCTGTGCACAGCAAT-AAACCCTGACT-AGAC  948

seq1  ACCAGGCTTAGGGATTAGAGTCGTTTATTATGAATCCCATAGAAAGAAAA  997
      | ||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  A-CAGGCTTAGGGATTAGAGTCGTTTA-TATGAATCCCATAGAAAGAAAA  996

seq1  ACCCAACTAGTGTTTTGTTTTGCTTTGTTTTGATTAAAAACAAAAAACAA  1047
         | |||||||||||| ||||||||| |||||||  |||||||||   |
seq2  ---CCACTAGTGTTTTG-TTTGCTTTG-TTTGATT--AAACAAAAA--CA  1037

seq1  AAAAACCCCTGCTCAGAACCCCATGTTGGAGTTTATAGGGAAACAGATTG  1097
      |||||||||||||||||| |||||||||||| ||||||||||||||| ||
seq2  AAAAACCCCTGCTCAGAA-CCCATGTTGGAG-TTATAGGGAAACAGAATG  1085

seq1  --CCTGCTGCAGCCATGGCTATGGGGTACACAGCACATTTTCAGGGTCCT  1145
         ||||||||| ||| ||||| ||  ||| ||||||||||||||   ||
seq2  GCTCTGCTGCAG-CAT-GCTATTGGTCACA-AGCACATTTTCAGG--TCT  1130

seq1  CGCCCCTCTCCAATCTAGAAGCACATCAGGCTTCTAGAATCTCAAATAGA  1195
      ||| |  || |||| || || | ||| |||  |||  | |||||||||||
seq2  CGCTC--CTTCAATTTA-AAACCCAT-AGG--TCTGAATTCTCAAATAGA  1174

seq1  AG  1197
      ||
seq2  AG  1176

seq1: chr7_124473647_124473750
seq2: B6Ng01-123J01.g_72_175 (reverse)

seq1  CTCTCCCCCCTCCCCTCCCTGACAGTTATCTACCACTCTGTCTGAGATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCCCCTCCCCTCCCTGACAGTTATCTACCACTCTGTCTGAGATGT  50

seq1  GTATGACCTTGGGGGTACTAGAGTGTATGAAGGGTGGAAGGCTTACTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGACCTTGGGGGTACTAGAGTGTATGAAGGGTGGAAGGCTTACTGAA  100

seq1  GAGG  104
      ||||
seq2  GAGG  104