BAC Information

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BAC

Clone NameB6Ng01-128C11
Chromosome7 (Build37)
Map Location 67,015,315 - 67,032,267
singlet/doubletdoublet
Overlap geneLOC664788
Upstream geneAtp10a, LOC621446, LOC668811, LOC668813, LOC668815, EG668818, Ube3a, LOC100040985, LOC100041010, LOC100041029, LOC100041051, Pwcr1
Downstream geneSnrpn, Snurf, EG664849, LOC100041201, LOC100041211, LOC664896
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128C11.bB6Ng01-128C11.g
ACCDH930081DH930082
length1,044672
definitionDH930081|Mus musculus domesticus DNA, BAC clone: B6Ng01-128C11, 5' end.DH930082|Mus musculus domesticus DNA, BAC clone: B6Ng01-128C11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,031,221 - 67,032,267)(67,015,315 - 67,015,995)
sequence
gaattctaggtgcccaggtcttggtggagcagggaacggctgccattgat
tatgtccaggcccttcgggacatggagcatgcctagggcctctggtttct
cccatgtttggagctttggcccattgttccctggcagtggattgtcagtg
tccagcagtccattgctctccccaaagccagagcactccagagtactgga
accacttgatgcaatgcactccaacgagcttggatctatgatgattccca
gtcaaacattccttggaaaagctgaacaaaatgagtgaaaactctgtacc
gccactctcatcggaactgaggtccagcatcttgggtctcccagttgcta
tgggcatcaggcacaggctgcccaaccactccattgttcttgacttcttc
gggctctagccagactctccagagacaggtgtgtgcttggcctactctgc
caaaaatccatggcgtaggacacagcaggtccttaagctctggtggcttg
ctccctttgctgtagtggagatgcttggcagatactcagtgggtagtcgt
gctaggtccatggagagggccccagccattgtggaaagtagactgtgagg
caaaagtagcagtggcagtggcaccaaatcatggcttttcacatgggaat
atcaagcagtggactccggcttcacaaaacacttatatgaaatttaccct
gttgcgttgctttacacattctatagaatgcacgctgctggtagagagtg
gcttgacacattagcatataaacgggactgtgtgactgttgtcggttctc
gtggtgaaacaaagctctgtgtccccgcacttggaaatttctcggggggt
tggctaggaataatagaaagagctaaaccttggaggtgatgtcagcacct
ctcgggtcaatttgcaccacactttcacactttcctgtgtttcgttgaca
gatgaaactttgataggacatcgctggagcactgagactgccgaacacgt
gttctgatataatttgttgatatatttgaaggatctccctcttt
gggaagcaggcttcattttcacagctgaaaggaacccccctctctctccc
tctctctgtgttagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgtcttttaccctgagacattccgtgctgtggcagcctctcc
ctatctctgtccacctgcccagcgctcattttgtctgttgtgaagacctc
cacctctctcaagagattgcttttggccctccacccctgctttgatctct
tctggtgaaaagttctcacgctatactgctcatcttctcacactaatgaa
aatcccattgtgcaaaactatcacaggccaagatccgactttactcaatt
tatcttagtgtgtcaaatgcagtctgcatccaaaaacttattttctccct
gatgattcccatgagcatgtctctcaatgtatatttgcaaaacacgatgt
cccctgttaaaacctccttttacgcacactagcaacgtgtttttccagaa
gagttagatcaaaacatcaaaaagaaacgtcacgagacaccttggtctct
tatttagagggtccctcacctagatggctctcctaaggctgtgtgtgcaa
gaactgtacctagtctttccctttgaccttccagagagctgactaaaggt
ccaaatacccagggatatccct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_67031221_67032267
seq2: B6Ng01-128C11.b_46_1089 (reverse)

seq1  AAAGA-GGAGATTCCTTCAAAAATTATTTCAACAAA-TCTATCGAGACAC  48
      ||||| ||||| |||||||||   ||| |||||||| | ||||   ||||
seq2  AAAGAGGGAGA-TCCTTCAAA---TATATCAACAAATTATATCAGAACAC  46

seq1  AGGTCTGCAAGTCTCA-TGCTCCCAGCGA-GTCC-ATCAAAGTTTCATCC  95
        ||  |  ||||||| |||| ||||||| |||| |||||||||||||| 
seq2  GTGTTCGGCAGTCTCAGTGCT-CCAGCGATGTCCTATCAAAGTTTCATCT  95

seq1  GTCTAC-AAACACAGGTAAGTGTGTAAATGTGGTGCAAACTGACCCGTGA  144
      ||| || ||||||||| ||||||| || ||||||||||| ||||||| ||
seq2  GTCAACGAAACACAGGAAAGTGTGAAAGTGTGGTGCAAATTGACCCGAGA  145

seq1  GGTGCCTGCCATCACCTCCAAGGCTTAGCTCCTTCTCTATTTCCTAGCCA  194
      |||| ||| |||||||||||||| ||||||| |||| |  ||||||||||
seq2  GGTG-CTGACATCACCTCCAAGGTTTAGCTCTTTCTATTATTCCTAGCCA  194

seq1  ACCCCCCGGGAAACTTCCAAGCTGCCTGGGACACAGAGCCTTCTGTTCAC  244
      |||||||| |||| ||||||| || | |||||||||||| || | |||||
seq2  ACCCCCCGAGAAATTTCCAAG-TG-CGGGGACACAGAGCTTTGT-TTCAC  241

seq1  CACCTGAACCGACAACAGTCACACAGTCCCGTTTATATGCTAATGGGTCA  294
      |||  |||||||||||||||||||||||||||||||||||||||| ||||
seq2  CACGAGAACCGACAACAGTCACACAGTCCCGTTTATATGCTAATGTGTCA  291

seq1  AGCTACACTCTACCAGCAGCCTGCATTCTATTGATTACGTAAAGCAATGC  344
      ||| || ||||||||||||| |||||||||| || |  ||||||||| ||
seq2  AGCCACTCTCTACCAGCAGCGTGCATTCTATAGAATGTGTAAAGCAACGC  341

seq1  AACAGGGTTAAAATTCATATAAGTG-CTTCTGAAGCCGGAGTCCACTGCT  393
      ||||||| |||| ||||||||||||  || ||||||||||||||||||||
seq2  AACAGGG-TAAATTTCATATAAGTGTTTTGTGAAGCCGGAGTCCACTGCT  390

seq1  TGATATTCCCATGTGAAAAGCCATGATTTGGTGCCACTGCCACTGCTACT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATTCCCATGTGAAAAGCCATGATTTGGTGCCACTGCCACTGCTACT  440

seq1  TTTGCCTCACAGTCTACTTTCCACAATGGCTGGGGCCCTCTCCATGGACC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTCACAGTCTACTTTCCACAATGGCTGGGGCCCTCTCCATGGACC  490

seq1  TAGCACGACTATCCACTGAGTATCTGCCAAGCATCTCCACTACAGCAAAG  543
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TAGCACGACTACCCACTGAGTATCTGCCAAGCATCTCCACTACAGCAAAG  540

seq1  GGAGCAAGCCACCAGAGCTTAAGGACCTGCTGTGTCCTACGCCATGGATT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCAAGCCACCAGAGCTTAAGGACCTGCTGTGTCCTACGCCATGGATT  590

seq1  TTTGGCAGAGTAGGCCAAGCACACACCTGTCTCTGGAGAGTCTGGCTAGA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCAGAGTAGGCCAAGCACACACCTGTCTCTGGAGAGTCTGGCTAGA  640

seq1  GCCCGAAGAAGTCAAGAACAATGGAGTGGTTGGGCAGCCTGTGCCTGATG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCGAAGAAGTCAAGAACAATGGAGTGGTTGGGCAGCCTGTGCCTGATG  690

seq1  CCCATAGCAACTGGGAGACCCAAGATGCTGGACCTCAGTTCCGATGAGAG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATAGCAACTGGGAGACCCAAGATGCTGGACCTCAGTTCCGATGAGAG  740

seq1  TGGCGGTACAGAGTTTTCACTCATTTTGTTCAGCTTTTCCAAGGAATGTT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCGGTACAGAGTTTTCACTCATTTTGTTCAGCTTTTCCAAGGAATGTT  790

seq1  TGACTGGGAATCATCATAGATCCAAGCTCGTTGGAGTGCATTGCATCAAG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGGGAATCATCATAGATCCAAGCTCGTTGGAGTGCATTGCATCAAG  840

seq1  TGGTTCCAGTACTCTGGAGTGCTCTGGCTTTGGGGAGAGCAATGGACTGC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCCAGTACTCTGGAGTGCTCTGGCTTTGGGGAGAGCAATGGACTGC  890

seq1  TGGACACTGACAATCCACTGCCAGGGAACAATGGGCCAAAGCTCCAAACA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACACTGACAATCCACTGCCAGGGAACAATGGGCCAAAGCTCCAAACA  940

seq1  TGGGAGAAACCAGAGGCCCTAGGCATGCTCCATGTCCCGAAGGGCCTGGA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGAAACCAGAGGCCCTAGGCATGCTCCATGTCCCGAAGGGCCTGGA  990

seq1  CATAATCAATGGCAGCCGTTCCCTGCTCCACCAAGACCTGGGCACCTAGA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATCAATGGCAGCCGTTCCCTGCTCCACCAAGACCTGGGCACCTAGA  1040

seq1  ATTC  1047
      ||||
seq2  ATTC  1044

seq1: chr7_67015315_67015995
seq2: B6Ng01-128C11.g_84_755

seq1  GGGAAGCAGGCTTCATTTTCACAGCTGAAAGGAACCCCCCTCTCTCTCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGCAGGCTTCATTTTCACAGCTGAAAGGAACCCCCCTCTCTCTCCC  50

seq1  TCTCTCTGTGTTAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  100
      |||||||||||||    |||||||||||||||||||||||||||||||||
seq2  TCTCTCTGTGTTA----GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  96

seq1  TGTGTGTGTGTGTGTCTTTTACCCTGAGACATTCCTTGCTGTGGCAGCCA  150
      ||||||||||||||||||||||||||||||||||| ||||||||||||| 
seq2  TGTGTGTGTGTGTGTCTTTTACCCTGAGACATTCCGTGCTGTGGCAGCCT  146

seq1  GTCCCTATTTCTGTCCACCTGTCCAGTGCTCATTTTGTCTGTTGTGAAGA  200
       ||||||| |||||||||||| |||| |||||||||||||||||||||||
seq2  CTCCCTATCTCTGTCCACCTGCCCAGCGCTCATTTTGTCTGTTGTGAAGA  196

seq1  CTTCCACCTCTCTCATGAGATTGCTTTTGGCCATCCACCCCTGCTTTGAT  250
      | ||||||||||||| |||||||||||||||| |||||||||||||||||
seq2  CCTCCACCTCTCTCAAGAGATTGCTTTTGGCCCTCCACCCCTGCTTTGAT  246

seq1  CTCTTCTGGTGAAAAGTTCTCAGGCTATACTGCTCAGCTTCTCACACTAA  300
      |||||||||||||||||||||| ||||||||||||| |||||||||||||
seq2  CTCTTCTGGTGAAAAGTTCTCACGCTATACTGCTCATCTTCTCACACTAA  296

seq1  TGAAAATCCCATTGTGCAGAACTATCACAGGCCAGGATCCGACTTGACTC  350
      |||||||||||||||||| ||||||||||||||| |||||||||| ||||
seq2  TGAAAATCCCATTGTGCAAAACTATCACAGGCCAAGATCCGACTTTACTC  346

seq1  AAGTTATCTTAGTGTGTCAAATGCAGTCTGCATCCAAGAACTTATTTTCT  400
      || |||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AATTTATCTTAGTGTGTCAAATGCAGTCTGCATCCAAAAACTTATTTTCT  396

seq1  CCCTGATGATTCCCATGAGCATGGCTCTCAAGGTGGATTTGCAAAACACA  450
      ||||||||||||||||||||||| ||||||| ||  ||||||||||||| 
seq2  CCCTGATGATTCCCATGAGCATGTCTCTCAATGTATATTTGCAAAACACG  446

seq1  ATGTGCCCTGTTGAAACCTCCTTCCTATGCACACTAGCAACTTGTCTTTC  500
      |||| ||||||| ||||||||||  || ||||||||||||| ||| ||||
seq2  ATGTCCCCTGTTAAAACCTCCTT-TTACGCACACTAGCAACGTGTTTTTC  495

seq1  CAGAAGAGTTAGGCCAAAACATCGAAAAGAAAGGTCCCATGACACCTTGG  550
      ||||||||||||  ||||||||| |||||||| ||| |  ||||||||||
seq2  CAGAAGAGTTAGATCAAAACATCAAAAAGAAACGTCACGAGACACCTTGG  545

seq1  TCTCTAATTTAGAGGGTCCCTCACCAAGATGGTTCTCCTAAGGCTGTGGG  600
      ||||| ||||||||||||||||||| |||||| ||||||||||||||| |
seq2  TCTCTTATTTAGAGGGTCCCTCACCTAGATGGCTCTCCTAAGGCTGTGTG  595

seq1  TGCAAGAACTGTTCCTAGACTTTCCCTTTGACCTTGCCAAGCAGGCTGAC  650
      |||||||||||| ||||| ||||||||||||||||  | ||   ||||||
seq2  TGCAAGAACTGTACCTAGTCTTTCCCTTTGACCTT--CCAGAGAGCTGAC  643

seq1  AACAAGGTCCAAATATACCAAGGATATCCCT  681
       | ||||||||||||  ||| ||||||||||
seq2  TA-AAGGTCCAAATA-CCCAGGGATATCCCT  672