BAC Information

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BAC

Clone NameB6Ng01-128D23
Chromosome7 (Build37)
Map Location 111,427,156 - 111,428,328
singlet/doubletsinglet
Overlap geneEG667823
Upstream geneLOC100041187, Olfr597, GA_x5J8B7TU1BB-380-666, Olfr598, Olfr599, Olfr600, Olfr601, Olfr602-ps1, Olfr604, Olfr596-ps1, Dub2, Olfr605, Olfr606, EG546989, Olfr608, Olfr609, Olfr610, Olfr611, EG545985, Olfr614, Olfr615, Olfr616, LOC100042167, Olfr617, Olfr618, Olfr619, Olfr620, LOC667639, Olfr622, Olfr623, Olfr624, Olfr625-ps1, Olfr261-ps1, Olfr260-ps1, Olfr627, Olfr1526-ps1, Olfr629, Olfr630, Olfr69, Olfr68, Olfr67, Hbb-b1, EG436003, Hbb-bh1, Hbb-y, Olfr66, Olfr64, Olfr65, Olfr631, Olfr632, Olfr633, Olfr634-ps1, LOC233614, Olfr635, Olfr636-ps1, Olfr637-ps1, Olfr638, Olfr639, Olfr640, Olfr641, Olfr642, Olfr643, Olfr644, Olfr645, Olfr646, 4931431F19Rik, Ubqln3, Ubqlnl, E030002O03Rik, Olfr647-ps1, Olfr648, Olfr649, Olfr650-ps1, Trim6, LOC667497
Downstream geneTrim12, Trim34, 9230105E10Rik, A530023O14Rik, EG434219, LOC100041595, Trim30, AI451617, LOC672495, LOC625305, EG625321, Olfr651, Olfr652, Olfr653, Olfr654, Olfr655, Olfr656, Olfr657, Olfr658, LOC667882, Olfr659, GA_x5J8B7W3SPQ-80592-80214, Olfr661, LOC625495, Olfr662-ps1, Olfr663, Olfr664, EG625530, LOC100042613, LOC233637, Dub1a, Dub1, Olfr665, Olfr666, Olfr667, Olfr668, Olfr669, EG545987, Olfr670, Olfr671, Olfr672, GA_x5J8B7W6B6J-189947-189022, Olfr674-ps1, Olfr675, Olfr676, Olfr677, LOC667987, Olfr678, Olfr679, Olfr680-ps1, Olfr681, Olfr682-ps1, Olfr683, Olfr684, Olfr685, Olfr686, EG668035
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128D23.bB6Ng01-128D23.g
ACCDH930151DH930152
length1,1851,081
definitionDH930151|Mus musculus domesticus DNA, BAC clone: B6Ng01-128D23, 5' end.DH930152|Mus musculus domesticus DNA, BAC clone: B6Ng01-128D23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttacataacaattatatacacatatagttttaatctattatga
ataagtagataagaaacttttggaaacaaggcaaacagggacaaaatcaa
cttggtctggaaagtttacagaaacccagggaatggcaactagagtctag
gagtaggaagaaaataataagggatagccatgtacttggaaaaagattcc
ccatcttctttcaaaaaggtggtctcaagccatgccaggtatgtagatat
cagagaataatttgcaacttgcagccatcagttttctccttcagtggtct
ggtttctgagttcagactcaggccgatatacttggcaacaagccattgag
gcattgttcccaacactcatcttacttactttgacaactaaagaataatc
agagcttttcttggacataaaacctcaacagtatacaacaaactgtaaaa
acacttgctcttgttctagagtttgtcgcccctggtagattctcttagga
ttaagctcaatggatagtcccattctttcaggcctcagaaggtaacagga
tggaatgaaatcccaggtctggattccatgatgatcaggtaactgaatga
tcacaggaagtagagattttccacctggtactgtttcctgctgtctccca
ccctccaacccccctcctttaccttgtactcccgggccacctcttcaatg
agagctgttttgtggccccggtgctcctgagatcgctcacaaagccagca
gatggccatcatgtccttcctacagaagagctggagtttctctccatgtc
ttgcacagttaaacactttctgctcctcttctgggctgggcttgaactct
ttgagcctctctactatgttggccacatgtagattaggcctcagattgct
agactgggtaactaagtcggcacacagggcaactgaaacattttccttat
cacatttgatggattccaaagtacaacgtgatgccagccttgggcaggag
gtgtgaccacaatcttgcactcacagggtttcaccatcagggtcagaaag
acaggacaggtcaccttcttcttttaaattcttcatgaatgtgaggccat
agtggcttgtgatccctgtgtatgacttgtccgactccttgccacttctg
ctcagggtgcttatgtgaatgggaatggtaagggg
gaattcattagtgctagtagctcaaagtcttgaagccaaatcaaaggctt
gtcacccagaggaggctgggggagtgtatttaaaagtggacttcataaat
gtctcatttgtgtgggatgtgtagctgacaaactccttgtactcccctca
gaagagaggagctgtttcacttcctgttacacagcaatacatgggctcaa
ataaaaaaaaaaaaaaacagaacaaggagttagttatctcatagtagttt
tataattctggggaggggaacaaagagttaaattggccagtagcttataa
ttaggaattgagaatagttgcctagcacaaaatggagttttccttagcca
tcacgaccccaataattaaaaaacaatttctgtctgtagactattgtttc
aattgaacaaaagtacttattttccttaatgttgcttgaaaaaagattta
ttttgttgagattgagggacatttgagtacttgtttggaaaactagtaca
atgaaatattcctaaaatatatggaggtgaagctaatgaggtctactaac
gatgagagatatggaaactcggctggcaatctcttgtcaccgaacaaggt
tccaatagtaggactgggttgcatccaattgagttgttggccaagagggg
tgcacagaattcctcccaaacaagccagactgttgctaaggcaaaagatt
cctctctgcaaagtgttagacttcagatacagaatttagcattaaaatgc
ataccaacagaccaaacctcaaaaatttccccttttttgtttaattaaaa
agttttttttctcttataacaataaacaacttgagttgaaacaattatga
aagttcttaggtaagatttacattcaaaagtcaattcttttttatttttc
actcagagaaagttcagagttctgtgtctaatcaatttctttcctacttg
cgttattaatctaaaaacatcttctcagacctagaatgttcttcttaatt
ccaaacactaagcttattatagactatacctatcaggtctttgatacatg
ggaggaaaaaaattttacattgaataaggcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_111427156_111428328
seq2: B6Ng01-128D23.b_46_1230

seq1  GAATTCTTTACATAACAATTATATACACATATAGTTTTAATCTATTATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTACATAACAATTATATACACATATAGTTTTAATCTATTATGA  50

seq1  ATAAGTAGATAAGAAACTTTTGGAAACAAGGCAAACAGGGACAAAATCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTAGATAAGAAACTTTTGGAAACAAGGCAAACAGGGACAAAATCAA  100

seq1  CTTGGTCTGGAAAGTTTACAGAAACCCAGGGAATGGCAACTAGAGTCTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTCTGGAAAGTTTACAGAAACCCAGGGAATGGCAACTAGAGTCTAG  150

seq1  GAGTAGGAAGAAAATAATAAGGGATAGCCATGTACTTGGAAAAAGATTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGGAAGAAAATAATAAGGGATAGCCATGTACTTGGAAAAAGATTCC  200

seq1  CCATCTTCTTTCAAAAAGGTGGTCTCAAGCCATGCCAGGTATGTAGATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTTCTTTCAAAAAGGTGGTCTCAAGCCATGCCAGGTATGTAGATAT  250

seq1  CAGAGAATAATTTGCAACTTGCAGCCATCAGTTTTCTCCTTCAGTGGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAATAATTTGCAACTTGCAGCCATCAGTTTTCTCCTTCAGTGGTCT  300

seq1  GGTTTCTGAGTTCAGACTCAGGCCGATATACTTGGCAACAAGCCATTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCTGAGTTCAGACTCAGGCCGATATACTTGGCAACAAGCCATTGAG  350

seq1  GCATTGTTCCCAACACTCATCTTACTTACTTTGACAACTAAAGAATAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGTTCCCAACACTCATCTTACTTACTTTGACAACTAAAGAATAATC  400

seq1  AGAGCTTTTCTTGGACATAAAACCTCAACAGTATACAACAAACTGTAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTTTTCTTGGACATAAAACCTCAACAGTATACAACAAACTGTAAAA  450

seq1  ACACTTGCTCTTGTTCTAGAGTTTGTCGCCCCTGGTAGATTCTCTTAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTGCTCTTGTTCTAGAGTTTGTCGCCCCTGGTAGATTCTCTTAGGA  500

seq1  TTAAGCTCAATGGATAGTCCCATTCTTTCAGGCCTCAGAAGGTAACAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCTCAATGGATAGTCCCATTCTTTCAGGCCTCAGAAGGTAACAGGA  550

seq1  TGGAATGAAATCCCAGGTCTGGATTCCATGATGATCAGGTAACTGAATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATGAAATCCCAGGTCTGGATTCCATGATGATCAGGTAACTGAATGA  600

seq1  TCACAGGAAGTAGAGATTTTCCACCTGGTACTGTTTCCTGCTGTCTCCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGGAAGTAGAGATTTTCCACCTGGTACTGTTTCCTGCTGTCTCCCA  650

seq1  CCCTCCAACCCCCCTCC-TTACCTTGTACTCCCGGGCCACCTCTTCAATG  699
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CCCTCCAACCCCCCTCCTTTACCTTGTACTCCCGGGCCACCTCTTCAATG  700

seq1  AGAGCTGTTTTGTGGCCCCGGTGCTCCTGAGATCGCTCACAAAGCCAGCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTGTTTTGTGGCCCCGGTGCTCCTGAGATCGCTCACAAAGCCAGCA  750

seq1  GATGGCCATCATGTCCTTCCTACAGAAGAGCTGGAGTTTCTCTCCATGTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCCATCATGTCCTTCCTACAGAAGAGCTGGAGTTTCTCTCCATGTC  800

seq1  TTGCACAGTTAAACACTTTCTGCTCCTCTTCTGGGCTGGGCTTGAACTCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACAGTTAAACACTTTCTGCTCCTCTTCTGGGCTGGGCTTGAACTCT  850

seq1  TTGAGCCTCTCTACTATGTTGGCCACATGTAGATTAGGCCTCAGATTGCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCCTCTCTACTATGTTGGCCACATGTAGATTAGGCCTCAGATTGCT  900

seq1  AGACT-GGTAACTAAGTCGGCACACAGGGCAACTG-AACA-TTTCCTTAT  946
      ||||| ||||||||||||||||||||||||||||| |||| |||||||||
seq2  AGACTGGGTAACTAAGTCGGCACACAGGGCAACTGAAACATTTTCCTTAT  950

seq1  CACATTTGATGGATT-CAAAGTACAACGTGATG-CAGCCTT-GGCAGAAG  993
      ||||||||||||||| ||||||||||||||||| ||||||| ||||| ||
seq2  CACATTTGATGGATTCCAAAGTACAACGTGATGCCAGCCTTGGGCAGGAG  1000

seq1  GTGTGACCACAATC-TGCACTCACA-GGTTTCACCATCAGGTTCAGACAG  1041
      |||||||||||||| |||||||||| ||||||||||||||| ||||| ||
seq2  GTGTGACCACAATCTTGCACTCACAGGGTTTCACCATCAGGGTCAGAAAG  1050

seq1  ACAGGACAGGTCACC-TCCTCCTTTAAATTCTTCATGAATTGTGAAGCCA  1090
      ||||||||||||||| || || ||||||||||||||||| ||||| ||||
seq2  ACAGGACAGGTCACCTTCTTCTTTTAAATTCTTCATGAA-TGTGAGGCCA  1099

seq1  TAGTTGC-TGTGAT-CCTGTGTATGAC-TGTCCGGACTCCTTG-CACTTC  1136
      |||| || |||||| |||||||||||| ||||| ||||||||| ||||||
seq2  TAGTGGCTTGTGATCCCTGTGTATGACTTGTCC-GACTCCTTGCCACTTC  1148

seq1  TGCTCA-GGTGCCTATGTGATTGGG-ATGGTGAAAGGGG  1173
      |||||| ||||| ||||||| |||| |||||  ||||||
seq2  TGCTCAGGGTGCTTATGTGAATGGGAATGGT--AAGGGG  1185