BAC Information

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BAC

Clone NameB6Ng01-128H15
Chromosome17 (Build37)7 (Build37)
Map Location 39,926,925 - 39,928,084125,863,011 - 125,863,381
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100043297, LOC100043300, EG668200
Downstream geneLOC672857, LOC627695, LOC634967, Pgk2, Crisp3, Crisp1, LOC668229, LOC100043756, EG433107, EG619517, Crisp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128H15.bB6Ng01-128H15.g
ACCDH930317DH930318
length1,139568
definitionDH930317|Mus musculus domesticus DNA, BAC clone: B6Ng01-128H15, 5' end.DH930318|Mus musculus domesticus DNA, BAC clone: B6Ng01-128H15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(39,926,925 - 39,928,084)(125,863,011 - 125,863,381)
sequence
gaattcctagaaagaaaaaaatgtgattttaaaatttaaactgtttataa
taataatagtaattattattattactatggaccttttcactatattgtaa
tattaaacctttaattatgaaaatgaagcctcatgaggaaaaagagttat
acattaagtattaatagtttttctctaattctgaagaatttgttctataa
ttttttccccaagcccaaatattttacaaagatatttcaaagactttaac
tgttttcaaaaatctcacacaaaattaaatataatattatgtcattgttt
gtgagatctcttaagtatatcaaaaccaaaacacaatattgggttacaca
aaaccaggactaataagtattcatcccccatagtaaaaattttctttgag
ataactcatgtttcaaatgcaggaatcttgtgtgaattattttcattgtt
catagggaaaaagttacttaacacttttgcttccatgttttatgttcttg
ttgataagagtttacatagatatatgtaaatgctatttatatacagcctt
aattctactaaaacaagtcattttttattttctagaatcaatcccattaa
tgcatcatatttttcagttgcctacaaatgttccacagatggctctattg
gtctgaggttctcttcttcctgctgtatctgcatatatcactactacttg
gaagaaaatcccacaatttggagtagccatgtttgtagcttattattaga
cccataatttatctgtttaacaggaccatagactacatatatcagggtaa
gtacttgtgcttaagaggggaacagaaggataaaaatgctaagaagggca
aaaccaagcaacagagaaagaaaatacaaaaaattggggttttactaggg
cttggagggggaagtaaatataaaaggagacaaacgacaatgagtcaaag
gtttgcccaacagtatcaaaatatgctttatatggctataattatgcaca
taaacatatagtgtatcatatatatttatatgtacataagaatatttact
ctatgtgttgtttgtgtgttcactgtcttcaaatactgatataatatttg
caatacaatagactaaaactcctttaccagatgaatagc
taaatggaaaattccagtacagtgaggctacctacatggagagagagaga
gagagagagagagagagagagagagagttagagagagtggggaaagagag
agagagagagaagaagaggtagaaggagaagaagaagaagaagaagaaga
agaagaagaagaagaagaaggaggaggaggaggaggaggaggaggtccat
gtcacttaaacctgggagcatgtccgtggaccccaggaatatgcacttct
ttaggtttattttcatccttaggttgtcaccatgtacacttgtattgttt
atcaccctgtacctggagatcattatgtgtcttgggacttagaaggtgaa
actcaagtgccatatagtctagcaaaacaaaacttaacaaaacaaaagcc
cataaaaacaacccctccagatttttagtattcatgatgtaatgagctct
cactttttcctacttggtctctgaggcccacatcttgtgttgttctcatc
ctttttttttttgtttttttttttttttttcttgatgaaaacatacagct
tgcttgtcttcactggct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_39926925_39928084
seq2: B6Ng01-128H15.b_42_1180 (reverse)

seq1  GCTATTTCATTCCTGGTAAAAGGAGTTTTTTTAGTCTATTGTATTTTGCA  50
      |||| |||||  ||||| |||||||   |||||||||||||||  |||||
seq2  GCTA-TTCAT--CTGGT-AAAGGAG---TTTTAGTCTATTGTA--TTGCA  41

seq1  AATATTATATCAAGTTAATTTG-AGACAAGTGCACACACAAAC-ACACAT  98
      ||||||||||| |||  ||||| |||| |||| |||||||||| ||||||
seq2  AATATTATATC-AGT--ATTTGAAGAC-AGTGAACACACAAACAACACAT  87

seq1  AGAGTAAATTATTCTTTATGTACATATAAATATATATGAATACACTTATA  148
      |||||||| ||||| ||||||||||||||||||||||| |||||| ||||
seq2  AGAGTAAA-TATTC-TTATGTACATATAAATATATATG-ATACAC-TATA  133

seq1  TGTTTATGTGCATAATTATAGCCAATATAAAGCATATTTTGATACTGTTT  198
      ||||||||||||||||||||||| ||||||||||||||||||||||| ||
seq2  TGTTTATGTGCATAATTATAGCC-ATATAAAGCATATTTTGATACTG-TT  181

seq1  GGGCAAACCTTTGACTCATTGTCCTTTTGTCTCCTTTTATATTTACTTCC  248
      |||||||||||||||||||||| | ||||||||||||||||||||||| |
seq2  GGGCAAACCTTTGACTCATTGT-CGTTTGTCTCCTTTTATATTTACTT-C  229

seq1  CCCCTCCAAGCCCTAGTAAAACCCCAATTTTTTTGTATTTTCTTTTCTCT  298
      ||||||||||||||||||||||||||| |||||||||||||| |||||||
seq2  CCCCTCCAAGCCCTAGTAAAACCCCAA-TTTTTTGTATTTTC-TTTCTCT  277

seq1  GTTGCTTGGTTTTGCCCTTCTTAGCATTTTTATCCTTCTGTTCCCCTCTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTTGGTTTTGCCCTTCTTAGCATTTTTATCCTTCTGTTCCCCTCTT  327

seq1  AAGCACAAGTACTTACCCTGATATATGTAGTCTATGGTCCTGTTAAACAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACAAGTACTTACCCTGATATATGTAGTCTATGGTCCTGTTAAACAG  377

seq1  ATAAATTATGGGTCTAATAATAAGCTACAAACATGGCTACTCCAAATTGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTATGGGTCTAATAATAAGCTACAAACATGGCTACTCCAAATTGT  427

seq1  GGGATTTTCTTCCAAGTAGTAGTGATATATGCAGATACAGCAGGAAGAAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTTTCTTCCAAGTAGTAGTGATATATGCAGATACAGCAGGAAGAAG  477

seq1  AGAACCTCAGACCAATAGAGCCATCTGTGGAACATTTGTAGGCAACTGAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCTCAGACCAATAGAGCCATCTGTGGAACATTTGTAGGCAACTGAA  527

seq1  AAATATGATGCATTAATGGGATTGATTCTAGAAAATAAAAAATGACTTGT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGATGCATTAATGGGATTGATTCTAGAAAATAAAAAATGACTTGT  577

seq1  TTTAGTAGAATTAAGGCTGTATATAAATAGCATTTACATATATCTATGTA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTAGAATTAAGGCTGTATATAAATAGCATTTACATATATCTATGTA  627

seq1  AACTCTTATCAACAAGAACATAAAACATGGAAGCAAAAGTGTTAAGTAAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTTATCAACAAGAACATAAAACATGGAAGCAAAAGTGTTAAGTAAC  677

seq1  TTTTTCCCTATGAACAATGAAAATAATTCACACAAGATTCCTGCATTTGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCCTATGAACAATGAAAATAATTCACACAAGATTCCTGCATTTGA  727

seq1  AACATGAGTTATCTCAAAGAAAATTTTTACTATGGGGGATGAATACTTAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGAGTTATCTCAAAGAAAATTTTTACTATGGGGGATGAATACTTAT  777

seq1  TAGTCCTGGTTTTGTGTAACCCAATATTGTGTTTTGGTTTTGATATACTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCCTGGTTTTGTGTAACCCAATATTGTGTTTTGGTTTTGATATACTT  827

seq1  AAGAGATCTCACAAACAATGACATAATATTATATTTAATTTTGTGTGAGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGATCTCACAAACAATGACATAATATTATATTTAATTTTGTGTGAGA  877

seq1  TTTTTGAAAACAGTTAAAGTCTTTGAAATATCTTTGTAAAATATTTGGGC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAAAACAGTTAAAGTCTTTGAAATATCTTTGTAAAATATTTGGGC  927

seq1  TTGGGGAAAAAATTATAGAACAAATTCTTCAGAATTAGAGAAAAACTATT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGAAAAAATTATAGAACAAATTCTTCAGAATTAGAGAAAAACTATT  977

seq1  AATACTTAATGTATAACTCTTTTTCCTCATGAGGCTTCATTTTCATAATT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTTAATGTATAACTCTTTTTCCTCATGAGGCTTCATTTTCATAATT  1027

seq1  AAAGGTTTAATATTACAATATAGTGAAAAGGTCCATAGTAATAATAATAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTTTAATATTACAATATAGTGAAAAGGTCCATAGTAATAATAATAA  1077

seq1  TTACTATTATTATTATAAACAGTTTAAATTTTAAAATCACATTTTTTTCT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTATTATTATTATAAACAGTTTAAATTTTAAAATCACATTTTTTTCT  1127

seq1  TTCTAGGAATTC  1160
      ||||||||||||
seq2  TTCTAGGAATTC  1139

seq1: chr7_125863011_125863381
seq2: B6Ng01-128H15.g_268_641

seq1  GTCCATGTCACTTAAACCTGGGAGCATGTCCGTGGACCCCAGGAATATGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATGTCACTTAAACCTGGGAGCATGTCCGTGGACCCCAGGAATATGC  50

seq1  ACTTCTTTAGGTTTATTTTCATCCTGAGGTTGTCACCATGTACACTTGTA  100
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ACTTCTTTAGGTTTATTTTCATCCTTAGGTTGTCACCATGTACACTTGTA  100

seq1  TTGTTTATCACCCAGTACCTGGAGATCATTATGTGTCTTGGGACTTAGAA  150
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTGTTTATCACCCTGTACCTGGAGATCATTATGTGTCTTGGGACTTAGAA  150

seq1  GGTGAAACTCAAGTGCCATATAGTCTAGCAAAACAAAACAAAACAAAACA  200
      |||||||||||||||||||||||||||||||||||||||  |||||||||
seq2  GGTGAAACTCAAGTGCCATATAGTCTAGCAAAACAAAACTTAACAAAACA  200

seq1  AAAGCCCATAAAAACAACCCCTCCAGATTTTTAGTATTCAGGATGTAATG  250
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AAAGCCCATAAAAACAACCCCTCCAGATTTTTAGTATTCATGATGTAATG  250

seq1  AGCTCTCACTTTTTCCTACTTGGTCTCTGAGGCCCACATCATGAGTTGTT  300
      |||||||||||||||||||||||||||||||||||||||| || ||||||
seq2  AGCTCTCACTTTTTCCTACTTGGTCTCTGAGGCCCACATCTTGTGTTGTT  300

seq1  CTCATCCTACTGTGTCTGTCGGCTGCTGACCTACTTGTC----TGAAAAC  346
      ||||||||  | | | | | |  |  |    |  || ||    |||||||
seq2  CTCATCCT--TTTTTTTTTTGTTTTTTTTTTTTTTTTTCTTGATGAAAAC  348

seq1  ATACAGCTTGC-TGTCTTCACTGGCT  371
      ||||||||||| ||||||||||||||
seq2  ATACAGCTTGCTTGTCTTCACTGGCT  374