BAC Information

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BAC

Clone NameB6Ng01-131L08
Chromosome7 (Build37)
Map Location 113,567,290 - 113,568,149
singlet/doubletsinglet
Overlap geneEG209380
Upstream geneEG244189, Cckbr, Prkcdbp, Smpd1, Apbb1, Hpxn, Trim3, Arfip2, Fxc1, Dnhd1, LOC100042811, LOC672646, 1500003O22Rik, Ilk, Taf10, Tpp1, Dchs1, Mrpl17, 9130208D14Rik, LOC626055, LOC100042856, LOC100042047, EG668108, EG668117, Gvin1, LOC672660, LOC100042097, LOC668128, LOC634394
Downstream geneEG668139, Gm1966, LOC100042141, Olfr693, Olfr694, Olfr695, Olfr696-ps1, Olfr697, Olfr698, Olfr699, Olfr700, Olfr701, Olfr702, Olfr703, Olfr704, Olfr705, Olfr706, Olfr707, Olfr708, Olfr709-ps1, Olfr710, LOC384651, Olfr6, Olfr711, GA_x5J8B7W6B6J-1784824-1783474, Olfr2, Olfr713, Olfr714, Olfr17, Olfr715, Olfr716, Nlrp14, LOC100042278, 1700012H05Rik, Syt9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131L08.bB6Ng01-131L08.g
ACCDH932696DH932697
length1,175862
definitionDH932696|Mus musculus domesticus DNA, BAC clone: B6Ng01-131L08, 5' end.DH932697|Mus musculus domesticus DNA, BAC clone: B6Ng01-131L08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgcctgttgtgaattctaatgtaggcttctaagatgatagtttc
tatgtcaatgacatagcattcagatggatggagttctttctttagggtct
aggatctctaaagcagaagctgacagagggacctctttaattttgaatca
taaaagttgggcaggttgggagggacctagagaggatcatgaatatcttg
gggtccaaatacaaacttaacttattagttctaaaaaagagagaaagtat
catttggtctggaagcaggggaaatatgtcctgctctatagtttcacagc
tttgatgtatgttggatgaagagagaggtgaagtaaatctatggtaagtt
catgctgaaggaagctgatctttacaagggatatgatagttaatcttagt
tgtctacttgactagatctggtatcacctaaaatataagctatggagcac
acatgttggactctgtggtcagattatttgaagattgaaggcccacccaa
aacatggtcaccacaacatgataaaagaaagacagagggtttctgtctgt
gcccgaagctgatcctctgtctcagggctccatactcaactagcaacagg
tgagagagaactagtctcccaggagtgcagacaagcctgtgagtgcaagt
agaactaccactgctactcagatggaccctcccggaaccctcgggacaca
ggacctaaggagcagcttgggatagaagccttctgttttccatctgcacc
cagagctaatactgtaccacacctctttatacccaaattcctctcagaga
gaactggtctcccaggagtactaacacagaggcttgcacacaaatacctt
caagagagagctgctctcccaggacagctgaaatacctgcaagctcagga
aataccaccacttctgttaaaatttgtgacccaagaggaccttcccagag
catatgacacaggaatcaagtaacatctgggacaggatccctctggttct
gtctgcaccccagtgctgaccctgtactacaactcttcatacccaaattc
tccagagaaactgtctcaggagtactggacccgagctgcagagggacagc
ccaatcaagaacagcagatgactactcaaagatacggacagtgtaaggca
aggcaaaacattagccacagaaatc
gaattctttagcttccatcctttttccttgttcaggtccaaagaggaaga
atttcttggggaccctgagaagctcttctctccttgccactaagtccttt
tggtggcttataaatcccctgcagggccagccctccagatgctcatctta
ccaggtctccatctgagaggtttggtctgtgagccagggtctgttccatg
tgactgagatgtctctccattatttcagtgatgtcttttaggaacacttc
agccattggccagcattcctcagggatctccattgcttgtctcagctctg
cttcttttttcctcactgcctcttcctctctgtgcttcccttctgactga
aaggccctcaaagcctgcagtgcctgtcctgcctgcctctgcctgctctt
tatcatctcccctggagtctcctgcagctctgcaacactatttggctgtg
agaggtccagcagcttctctagagcctttttctcccatgtgtgttgtgtc
tgtgacttcagcttctggaggtctcttttgtccaaatattgcaaggcctg
ggcagaggtcacacccaggtcttcctgaagcttaggcagccagtagtcaa
cagacagtcccacgtcattcagcatctcctggagatcatgtcttcttctg
cttctggactgaggcttgtcatgaaaattctctgctgtgttcatgactgt
gtgaagaacaggcacttagttaaaatcttactcttcgtaagcatttattt
ctttggccaatagaatgagtgtctcaagtctttaagtctgaaggaactcc
tcatccctacctttaattttgaactttgtattttcattagtatctttgtc
acattactgtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_113567290_113568149
seq2: B6Ng01-131L08.g_71_931

seq1  GAATTCTTTAGCTTCCATCCTTTTTCCTTGTTCAGGTCCAAAGAGGAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAGCTTCCATCCTTTTTCCTTGTTCAGGTCCAAAGAGGAAGA  50

seq1  ATTTCTTGGGGACCCTGAGAAGCTCTTCTCTCCTTGCCACTAAGTCCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTGGGGACCCTGAGAAGCTCTTCTCTCCTTGCCACTAAGTCCTTT  100

seq1  TGGTGGCTTATAAATCCCCTGCAGGGCCAGCCCTCCAGATGCTCATCTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGCTTATAAATCCCCTGCAGGGCCAGCCCTCCAGATGCTCATCTTA  150

seq1  CCAGGTCTCCATCTGAGAGGTTTGGTCTGTGAGCCAGGGTCTGTTCCATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTCTCCATCTGAGAGGTTTGGTCTGTGAGCCAGGGTCTGTTCCATG  200

seq1  TGACTGAGATGTCTCTCCATTATTTCAGTGATGTCTTTTAGGAACACTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGAGATGTCTCTCCATTATTTCAGTGATGTCTTTTAGGAACACTTC  250

seq1  AGCCATTGGCCAGCATTCCTCAGGGATCTCCATTGCTTGTCTCAGCTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATTGGCCAGCATTCCTCAGGGATCTCCATTGCTTGTCTCAGCTCTG  300

seq1  CTTCTTTTTTCCTCACTGCCTCTTCCTCTCTGTGCTTCCCTTCTGACTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTTTTCCTCACTGCCTCTTCCTCTCTGTGCTTCCCTTCTGACTGA  350

seq1  AAGGCCCTCAAAGCCTGCAGTGCCTGTCCTGCCTGCCTCTGCCTGCTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCCTCAAAGCCTGCAGTGCCTGTCCTGCCTGCCTCTGCCTGCTCTT  400

seq1  TATCATCTCCCCTGGAGTCTCCTGCAGCTCTGCAACACTATTTGGCTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATCTCCCCTGGAGTCTCCTGCAGCTCTGCAACACTATTTGGCTGTG  450

seq1  AGAGGTCCAGCAGCTTCTCTAGAGCCTTTTTCTCCCATGTGTGTTGTGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTCCAGCAGCTTCTCTAGAGCCTTTTTCTCCCATGTGTGTTGTGTC  500

seq1  TGTGACTTCAGCTTCTGGAGGTCTCTTTTGTCCAAATATTGCAAGGCCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACTTCAGCTTCTGGAGGTCTCTTTTGTCCAAATATTGCAAGGCCTG  550

seq1  GGCAGAGGTCACACCCAGGTCTTCCTGAAGCTTAGGCAGCCAGTAGTCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGGTCACACCCAGGTCTTCCTGAAGCTTAGGCAGCCAGTAGTCAA  600

seq1  CAGACAGTCCCACGTCATTCAGCATCTCCTGGAGATCATGTCTTCTTCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAGTCCCACGTCATTCAGCATCTCCTGGAGATCATGTCTTCTTCTG  650

seq1  CTTCTGGACTGAGGCTTGTCATGAAAATTCTCTGCTGTGTTCATGACTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGGACTGAGGCTTGTCATGAAAATTCTCTGCTGTGTTCATGACTGT  700

seq1  GTGAAGAACAGGCACTTAGTTAAAATCTTACTCTTCGTAAGCATTTATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGAACAGGCACTTAGTTAAAATCTTACTCTTCGTAAGCATTTATTT  750

seq1  C-TTGGCCAATAGAATGAGTGTCTCAAGTCTTTAAGTCTGAAGGAACTCC  799
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGCCAATAGAATGAGTGTCTCAAGTCTTTAAGTCTGAAGGAACTCC  800

seq1  TCATCCCTACCTTTAATTTTGAACTTTGTATTTTCATTAGTATCTTTGTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCCTACCTTTAATTTTGAACTTTGTATTTTCATTAGTATCTTTGTC  850

seq1  ACATTACTGTC  860
      |||||||||||
seq2  ACATTACTGTC  861