BAC Information

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BAC

Clone NameB6Ng01-134G06
Chromosome7 (Build37)
Map Location 135,462,461 - 135,554,338
singlet/doubletdoublet
Overlap geneEG628781, Rgs10, LOC100043643
Upstream geneItgal, Zfp768, LOC100043097, LOC100043589, 6430604K15Rik, 9130019O22Rik, E430018J23Rik, LOC100043590, Zfp764, Zfp688, Zfp689, Prr14, Fbs1, 1700008J07Rik, LOC100043597, D030022P06Rik, Phkg2, Gm166, Rnf40, 1700120K04Rik, Zfp629, Bcl7c, Ctf1, Ctf2, Fbxl19, Tmem142c, Setd1a, Hsd3b7, Stx1b2, Stx4a, Zfp668, Zfp646, BC039632, Vkorc1, Bckdk, Myst1, Prss8, Prss36, Fus, Pycard, Trim72, LOC436010, EG668675, Itgam, Itgax, Itgad, Cox6a2, LOC100043133, Armc5, Tgfb1i1, Slc5a2, BC017158
Downstream geneTial1, Bag3, EG639030, Inpp5f, LOC100043651, 1110007A13Rik, Sec23ip, LOC210714, LOC100043144, Ppapdc1a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134G06.bB6Ng01-134G06.g
ACCDH934701DH934702
length1,265731
definitionDH934701|Mus musculus domesticus DNA, BAC clone: B6Ng01-134G06, 5' end.DH934702|Mus musculus domesticus DNA, BAC clone: B6Ng01-134G06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(135,553,066 - 135,554,338)(135,462,461 - 135,463,191)
sequence
gaattcaccccaagtttctgtctacctacactctaacaatgtaattgtta
ttggtcagtctcctgttccttgaccccacccctaccccttctctccctct
ctccaggatctcaccacgtaactctggctgaattctctgtataaactagg
ctggccttggactcagagatgcgcctgcctctgccccgcaaacactggga
ctaaaggtctgcacagccacaccctgctgttcttagcctcttcaaatctg
ctcctttctgacctctcgatgtaaagatgagcagaaatcaaagttaaaca
gtcatagagccccgtgagaaaggacaggttccctggtgccagaccaccgg
ccacggaccgagactttctttctttgcaagtctcacatctcagcgtcctc
acctggaaaacggggacgtaataaatgtcacacgagagtgctttcaaccc
acagcaaagtgtggcccacaacctcacacctggaggacaaattgtaagta
gttttatcatcagctgaagataaatttactgaaaaaattaggcccaggca
tgcaaaaaagaaatttcggagagctagaagaacaaagcaacacaaaacaa
agaaaaaaacaaaaacaaaacaaccccccccaaacaacaacaacaacaac
aaaaaactggccaggcaacagtagaaccccctttcttcgtcataacattt
tagagttgaaataaacaagcaaaatataagcagacaaaattgagacaaac
taataccactccaaattgctgcttctagcccgagaaatcttaaagctgct
aagaaaacatgtttagtgtatttttttttccacctgggcattttaagcct
gctttcttgcctattcacccaaaatggaaacttgtcgatgaaaatggatg
ggtaggactggagagctggctcagcagtgaagtgcttgccctgaatgtga
gaggacctgagtctgctcccaggcccaggcagaagaagccagttcacttt
gtgattgtcacccagggctggggaagccaggccagaggatccttgggttc
ctcgggccagccagccttggcggaacccgccagataaatgagaaattcag
actaaaaacccaagtgtgagaaggggctgagaaagaccctcggaactgac
cctctggccctaacatgcattgtgtatgcacacacacagtagccatgcag
aatgacaaaatctagaattgggatctctgcttagggttggcacgctgtga
aatctctatgggtgt
gaattccatgcatctcaggagattgctacttttcttcatcacaaatagaa
agtggcagggcgttactgtccagttgctcgaacacctaaccacacaagat
tccgcagaattcacactctgggtttttgagatcttcatgatgccaagagg
aagatggcaggttgggtacatcttcctaaaggcttataggctgctgaggc
gtgagctgggccctagacaagcctcaggagaaagggcccgtgacactgag
caggcacactgagcatgttttggaggcaagggcagatccaggttttgtga
gacctaaagcttaaggaatgtgggaaattccctcttccagaccatgaaga
gcagctgggcgtggtggcgcacactcagcgatgtggcggctcaagcagta
ggagcctcattagtttgaagtcagtctgagctatttatagcaaggtcctg
cctcatggagctagagagatggctcagctgtgatgggcacttgctgctct
tacagaggacccaagttcgattcccagtaccaacacagtggctcacaact
atcctaactccagttgcagggaatccaatgccctcttctgacctccaagg
gtacaaggcatacatgtgatgtgatgtatgtgtgtgtatcacattcatac
acatgaaaataagtaaataaataaacaaaaaaaacaccctcctgcctcag
aagggaaggagggagggagggaaggagagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_135553066_135554338
seq2: B6Ng01-134G06.b_49_1313 (reverse)

seq1  AAACCCA---AGATTTCACAGCTGCCCAAACCTTATCCAAGAGTCTCCCA  47
      | |||||   ||||||||||||   |||| ||| | |  |||   |||||
seq2  ACACCCATAGAGATTTCACAGCGTGCCAACCCTAAGCAGAGA---TCCCA  47

seq1  AATTCAGATATTTTGTCATTCTTGTGCATGGCTACCTGTGTGTGTGCATA  97
      | |  ||  ||||||||||||   |||||||||| |||||||||||||||
seq2  ATTCTAG--ATTTTGTCATTC---TGCATGGCTA-CTGTGTGTGTGCATA  91

seq1  CACATATGCATGTATAGGCCAGA-GGTCAGTTCCCGAGGTCTTTCTCAGC  146
      |||| ||||||||   ||||||| ||||||||||   |||||||||||||
seq2  CACA-ATGCATGTTAGGGCCAGAGGGTCAGTTCCGAGGGTCTTTCTCAGC  140

seq1  CCC-TCTCCACCTTGGTTTTTTAGTCTGAATTTCTCACTTTTATCT-GCT  194
      ||| ||||   ||||| ||||||||||||||||||||  ||||||| || 
seq2  CCCTTCTCACACTTGGGTTTTTAGTCTGAATTTCTCA--TTTATCTGGCG  188

seq1  GGTTCTGCC-AGGCTGGCTGGCCCG-GAGACCCAGGGATCCTCCTGGCCT  242
      ||||| ||| ||||||||||||||| |  ||||| ||||||| |||||||
seq2  GGTTCCGCCAAGGCTGGCTGGCCCGAGGAACCCAAGGATCCT-CTGGCCT  237

seq1  GGCTTCCCCAGCCCTGGGGTGACAATCACAAAGTGAACTGGCTTCTTCTG  292
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GGCTTCCCCAGCCCT-GGGTGACAATCACAAAGTGAACTGGCTTCTTCTG  286

seq1  CCTGGGCCTGGGGAGCAGACTCAGGTCCTCTCACATTCAGGGCAAGCACT  342
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGCCT-GGGAGCAGACTCAGGTCCTCTCACATTCAGGGCAAGCACT  335

seq1  TCACTGCCTGAGCCAGCTCTCCAGTCCTACCCATCCATTTTCATCGACAA  392
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTG-CTGAGCCAGCTCTCCAGTCCTACCCATCCATTTTCATCGACAA  384

seq1  GTTTCCATTTTGGGTGAATAGGCAAGAAAGCAGGCTTAAAATGCCCAGGT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCATTTTGGGTGAATAGGCAAGAAAGCAGGCTTAAAATGCCCAGGT  434

seq1  GGAAAAAAAAATACACTAAACATGTTTTCTTAGCAGCTTTAAGATTTCTC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAAAAATACACTAAACATGTTTTCTTAGCAGCTTTAAGATTTCTC  484

seq1  GGGCTAGAAGCAGCAATTTGGAGTGGTATTAGTTTGTCTCAATTTTGTCT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTAGAAGCAGCAATTTGGAGTGGTATTAGTTTGTCTCAATTTTGTCT  534

seq1  GCTTATATTTTGCTTGTTTATTTCAACTCTAAAATGTTATGACGAAGAAA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATATTTTGCTTGTTTATTTCAACTCTAAAATGTTATGACGAAGAAA  584

seq1  GGGGGTTCTACTGTTGCCTGGCCAGTTTTTTGTTGTTGTTGTTGTTGTTT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGTTCTACTGTTGCCTGGCCAGTTTTTTGTTGTTGTTGTTGTTGTTT  634

seq1  GGGGGGGGTTGTTTTGTTTTTGTTTTTTTCTTTGTTTTGTGTTGCTTTGT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGGGTTGTTTTGTTTTTGTTTTTTTCTTTGTTTTGTGTTGCTTTGT  684

seq1  TCTTCTAGCTCTCCGAAATTTCTTTTTTGCATGCCTGGGCCTAATTTTTT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTAGCTCTCCGAAATTTCTTTTTTGCATGCCTGGGCCTAATTTTTT  734

seq1  CAGTAAATTTATCTTCAGCTGATGATAAAACTACTTACAATTTGTCCTCC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAATTTATCTTCAGCTGATGATAAAACTACTTACAATTTGTCCTCC  784

seq1  AGGTGTGAGGTTGTGGGCCACACTTTGCTGTGGGTTGAAAGCACTCTCGT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTGAGGTTGTGGGCCACACTTTGCTGTGGGTTGAAAGCACTCTCGT  834

seq1  GTGACATTTATTACGTCCCCGTTTTCCAGGTGAGGACGCTGAGATGTGAG  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACATTTATTACGTCCCCGTTTTCCAGGTGAGGACGCTGAGATGTGAG  884

seq1  ACTTGCAAAGAAAGAAAGTCTCGGTCCGTGGCCGGTGGTCTGGCACCAGG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCAAAGAAAGAAAGTCTCGGTCCGTGGCCGGTGGTCTGGCACCAGG  934

seq1  GAACCTGTCCTTTCTCACGGGGCTCTATGACTGTTTAACTTTGATTTCTG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTGTCCTTTCTCACGGGGCTCTATGACTGTTTAACTTTGATTTCTG  984

seq1  CTCATCTTTACATCGAGAGGTCAGAAAGGAGCAGATTTGAAGAGGCTAAG  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCTTTACATCGAGAGGTCAGAAAGGAGCAGATTTGAAGAGGCTAAG  1034

seq1  AACAGCAGGGTGTGGCTGTGCAGACCTTTAGTCCCAGTGTTTGCGGGGCA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCAGGGTGTGGCTGTGCAGACCTTTAGTCCCAGTGTTTGCGGGGCA  1084

seq1  GAGGCAGGCGCATCTCTGAGTCCAAGGCCAGCCTAGTTTATACAGAGAAT  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGGCGCATCTCTGAGTCCAAGGCCAGCCTAGTTTATACAGAGAAT  1134

seq1  TCAGCCAGAGTTACGTGGTGAGATCCTGGAGAGAGGGAGAGAAGGGGTAG  1192
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCAGAGTTACGTGGTGAGATCCTGGAGAGAGGGAGAGAAGGGGTAG  1184

seq1  GGGTGGGGTCAAGGAACAGGAGACTGACCAATAACAATTACATTGTTAGA  1242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGGGTCAAGGAACAGGAGACTGACCAATAACAATTACATTGTTAGA  1234

seq1  GTGTAGGTAGACAGAAACTTGGGGTGAATTC  1273
      |||||||||||||||||||||||||||||||
seq2  GTGTAGGTAGACAGAAACTTGGGGTGAATTC  1265

seq1: chr7_135462461_135463191
seq2: B6Ng01-134G06.g_69_799

seq1  GAATTCCATGCATCTCAGGAGATTGCTACTTTTCTTCATCACAAATAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGCATCTCAGGAGATTGCTACTTTTCTTCATCACAAATAGAA  50

seq1  AGTGGCAGGGCGTTACTGTCCAGTTGCTCGAACACCTAACCACACAAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCAGGGCGTTACTGTCCAGTTGCTCGAACACCTAACCACACAAGAT  100

seq1  TCCGCAGAATTCACACTCTGGGTTTTTGAGATCTTCATGATGCCAAGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGCAGAATTCACACTCTGGGTTTTTGAGATCTTCATGATGCCAAGAGG  150

seq1  AAGATGGCAGGTTGGGTACATCTTCCTAAAGGCTTATAGGCTGCTGAGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGGCAGGTTGGGTACATCTTCCTAAAGGCTTATAGGCTGCTGAGGC  200

seq1  GTGAGCTGGGCCCTAGACAAGCCTCAGGAGAAAGGGCCCGTGACACTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCTGGGCCCTAGACAAGCCTCAGGAGAAAGGGCCCGTGACACTGAG  250

seq1  CAGGCACACTGAGCATGTTTTGGAGGCAAGGGCAGATCCAGGTTTTGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCACACTGAGCATGTTTTGGAGGCAAGGGCAGATCCAGGTTTTGTGA  300

seq1  GACCTAAAGCTTAAGGAATGTGGGAAATTCCCTCTTCCAGACCATGAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTAAAGCTTAAGGAATGTGGGAAATTCCCTCTTCCAGACCATGAAGA  350

seq1  GCAGCTGGGCGTGGTGGCGCACACTCAGCGATGTGGCGGCTCAAGCAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTGGGCGTGGTGGCGCACACTCAGCGATGTGGCGGCTCAAGCAGTA  400

seq1  GGAGCCTCATTAGTTTGAAGTCAGTCTGAGCTATTTATAGCAAGGTCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCTCATTAGTTTGAAGTCAGTCTGAGCTATTTATAGCAAGGTCCTG  450

seq1  CCTCATGGAGCTAGAGAGATGGCTCAGCTGTGATGGGCACTTGCTGCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATGGAGCTAGAGAGATGGCTCAGCTGTGATGGGCACTTGCTGCTCT  500

seq1  TACAGAGGACCCAAGTTCGATTCCCAGTACCAACACAGTGGCTCACAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAGGACCCAAGTTCGATTCCCAGTACCAACACAGTGGCTCACAACT  550

seq1  ATCCTAACTCCAGTTGCAGGGAATCCAATGCCCTCTTCTGACCTCCAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTAACTCCAGTTGCAGGGAATCCAATGCCCTCTTCTGACCTCCAAGG  600

seq1  GTACAAGGCATACATGTGATGTGATGTATGTGTGTGTATCACATTCATAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAAGGCATACATGTGATGTGATGTATGTGTGTGTATCACATTCATAC  650

seq1  ACATGAAAATAAGTAAATAAATAAACAAAAAAAACACCCTCCTGCCTCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAAAATAAGTAAATAAATAAACAAAAAAAACACCCTCCTGCCTCAG  700

seq1  AAGGGAAGGAGGGAGGGAGGGAAGGAGAGAG  731
      |||||||||||||||||||||||||||||||
seq2  AAGGGAAGGAGGGAGGGAGGGAAGGAGAGAG  731