BAC Information

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BAC

Clone NameB6Ng01-137G06
Chromosome7 (Build37)
Map Location 88,130,643 - 88,302,813
singlet/doubletdoublet
Overlap geneZfp592, Alpk3, Slc28a1
Upstream geneZfp710, Idh2, Sema4b, Cib1, D330012F22Rik, LOC100042374, LOC100042379, Ttll13, Ngrn, Vps33b, Prc1, Rccd1, Unc45a, Hddc3, Man2a2, Fes, Furin, LOC384647, Blm, Crtc3, Iqgap1, LOC100042402, Zscan2, Wdr73, Nmb, Sec11a
Downstream geneEG623286, LOC100043130, Pde8a, EG636544, Rps17, Cpeb1, LOC623355, Ap3b2, BC048679, Fsd2, Whdc1, Homer2, 2610204K14Rik, 3110040N11Rik, Btbd1, Tm6sf1, LOC100043161, Hdgfrp3, Bnc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137G06.bB6Ng01-137G06.g
ACCDH936921DH936922
length964855
definitionDH936921|Mus musculus domesticus DNA, BAC clone: B6Ng01-137G06, 5' end.DH936922|Mus musculus domesticus DNA, BAC clone: B6Ng01-137G06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(88,301,853 - 88,302,813)(88,130,643 - 88,131,499)
sequence
gaattccaggctattcagagctacacagtgaggcccctgcctcaagcggg
agtagggagagaacgggaggtgaggttacatgggctcaggctaataaagg
cagagggcatctgttctcagggaacagacaggaatccatgaagctgaagg
cctggagcttcaggccctgaaaccctccttctttgtctaaaccccacttg
tttctccttactcagaagcagaaaccgcctagggtgtgaaaatgaagtcc
ctcacgaaggcttggtcctcagctgcctcagagcctggagggagctgcac
tcaccaatgagtcaatccatctccactgactgtgaggaaaacctggctgg
gagaagtaggtcactggggcatgcctgtacatcttacacccagactcttc
ttttctgtctctctgcgtccctgactgccctgaggtggactgaggtggac
agaaccattctaccacaccgcctctgcaatgatccatctcaacacaagcc
cacagagatggggcaaagtgggtggaaacctctaaaggcatgatcataag
taaaatacatctccatttttcaactctctctggggcactttgtcctagta
acagaaagctcgcttgcacaccatgcgaacgaaccatcaagaggcccaac
tcctctttccctgccaccagcactagatggcaagcccagcaccctgatcc
ctcctggaggagggcagtcggggtggtgccctcttggaactttcagggct
tcagttgtctcctccctggcagctcagcaccatcgtggacactgccacgc
ctgaaataggaggtttctccgtctgccagtcttagaccctgaactcttcc
ttcagcttgaagagtacacccagcttgtaagcttggatttaggggggaca
cacattccagagtcatagggccacagcctcaaccccacagtgggcggtcc
tctgctcttgatga
gaattcaatccctatagttcaagcagaaaagccagggcataatgaaattc
acgtgctagggagggacaggtggcttgctggagtcacaggacaagaggcc
tagcacacttaaggtgcaggtgtaacccccatatgcacacaaaataaaat
gtaaaaaactgtttcaaaaaaaataaaatttgcacatgcctttaatccta
gcactcaagcagtagcaggcagatctctgagtttgaggccagcctggtct
acagagtaagttccaggacagccaagactgcacacaaaacccagtctcaa
aaacaaaaagtaaataaataaatacataaataataaaaataaacaaaaat
gtaaaaaattgaactggggcaataactgtcagtttgatccccatgtaaaa
atgtatggagtggtggttcatatttgtaaccctagcactggggaagcaga
gagaagccttggggataactggccagccagcctcttacctgtgagctcca
gagcttccggtcaatgagagagctcagcttaaaaatcaaggtgtacagaa
aagtaagaaacaacatgaaaagttgtcctctagcctcggtatgtatgtac
acacacacacacatacacacacacacacacactcacacaacctgcacaca
tatggaaaacacgtatacatattaaaataagataaaaatgaaagggccag
tggtatggcccttgtctagcatgtacaaagccatggcttcaagctcagag
tgcaaaaggaaaaagtaggaacacagcctgtggaatgtcttgaaattaga
ggcaacatatcttgtttcaataattggcaggatagtgggtggaaagaaca
aggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_88301853_88302813
seq2: B6Ng01-137G06.b_47_1009 (reverse)

seq1  CATCAAGAGC--AGGAACGGCCACTGTGGGATTTGAGGCTGTGGCCATAT  48
      ||||||||||  |||| || ||||||||||  |||||||||||||| |||
seq2  CATCAAGAGCAGAGGACCGCCCACTGTGGG-GTTGAGGCTGTGGCCCTAT  49

seq1  GGCTCTGGAATGTGTGTCCCCCCTAAAATCCAAGCTTACAAGCTGGGTGT  98
      | |||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GACTCTGGAATGTGTGTCCCCCCT-AAATCCAAGCTTACAAGCTGGGTGT  98

seq1  ACTCTTCAAGCTGAAGGAAGAGGTCAGGGTCT-AGACTGGCAGACGGAGA  147
      |||||||||||||||||||||| ||||||||| |||||||||||||||||
seq2  ACTCTTCAAGCTGAAGGAAGAGTTCAGGGTCTAAGACTGGCAGACGGAGA  148

seq1  AACCTCCTATTTCAGGCGTGGCAGTGTCCACGATGGTGCTGAGCTGCCAG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCCTATTTCAGGCGTGGCAGTGTCCACGATGGTGCTGAGCTGCCAG  198

seq1  GGAGGAGACAACTGAAGCCCTGAAAGTTCCAAGAGGGCACCACCCCGACT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAGACAACTGAAGCCCTGAAAGTTCCAAGAGGGCACCACCCCGACT  248

seq1  GCCCTCCTCCAGGAGGGATCAGGGTGCTGGGCTTGCCATCTAGTGCTGGT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCCTCCAGGAGGGATCAGGGTGCTGGGCTTGCCATCTAGTGCTGGT  298

seq1  GGCAGGG-AAGAGGAGTTGGGCCTCTTGATGGTTCGTTCGCATGGTGTGC  346
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGGAAAGAGGAGTTGGGCCTCTTGATGGTTCGTTCGCATGGTGTGC  348

seq1  AAGCGAGCTTTCTGTTACTAGGACAAAGTGCCCCAGAGAGAGTTGAAAAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCGAGCTTTCTGTTACTAGGACAAAGTGCCCCAGAGAGAGTTGAAAAA  398

seq1  TGGAGATGTATTTTACTTATGATCATGCCTTTAGAGGTTTCCACCCACTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGATGTATTTTACTTATGATCATGCCTTTAGAGGTTTCCACCCACTT  448

seq1  TGCCCCATCTCTGTGGGCTTGTGTTGAGATGGATCATTGCAGAGGCGGTG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCATCTCTGTGGGCTTGTGTTGAGATGGATCATTGCAGAGGCGGTG  498

seq1  TGGTAGAATGGTTCTGTCCACCTCAGTCCACCTCAGGGCAGTCAGGGACG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGAATGGTTCTGTCCACCTCAGTCCACCTCAGGGCAGTCAGGGACG  548

seq1  CAGAGAGACAGAAAAGAAGAGTCTGGGTGTAAGATGTACAGGCATGCCCC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGACAGAAAAGAAGAGTCTGGGTGTAAGATGTACAGGCATGCCCC  598

seq1  AGTGACCTACTTCTCCCAGCCAGGTTTTCCTCACAGTCAGTGGAGATGGA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACCTACTTCTCCCAGCCAGGTTTTCCTCACAGTCAGTGGAGATGGA  648

seq1  TTGACTCATTGGTGAGTGCAGCTCCCTCCAGGCTCTGAGGCAGCTGAGGA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTCATTGGTGAGTGCAGCTCCCTCCAGGCTCTGAGGCAGCTGAGGA  698

seq1  CCAAGCCTTCGTGAGGGACTTCATTTTCACACCCTAGGCGGTTTCTGCTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCCTTCGTGAGGGACTTCATTTTCACACCCTAGGCGGTTTCTGCTT  748

seq1  CTGAGTAAGGAGAAACAAGTGGGGTTTAGACAAAGAAGGAGGGTTTCAGG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTAAGGAGAAACAAGTGGGGTTTAGACAAAGAAGGAGGGTTTCAGG  798

seq1  GCCTGAAGCTCCAGGCCTTCAGCTTCATGGATTCCTGTCTGTTCCCTGAG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGAAGCTCCAGGCCTTCAGCTTCATGGATTCCTGTCTGTTCCCTGAG  848

seq1  AACAGATGCCCTCTGCCTTTATTAGCCTGAGCCCATGTAACCTCACCTCC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGATGCCCTCTGCCTTTATTAGCCTGAGCCCATGTAACCTCACCTCC  898

seq1  CGTTCTCTCCCTACTCCCGCTTGAGGCAGGGGCCTCACTGTGTAGCTCTG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCTCTCCCTACTCCCGCTTGAGGCAGGGGCCTCACTGTGTAGCTCTG  948

seq1  AATAGCCTGGAATTC  961
      |||||||||||||||
seq2  AATAGCCTGGAATTC  963

seq1: chr7_88130643_88131499
seq2: B6Ng01-137G06.g_69_923

seq1  GAATTCAATCCCTATAGTTCAAGCAGAAAAGCCAGGGCATAATGAAATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCCCTATAGTTCAAGCAGAAAAGCCAGGGCATAATGAAATTC  50

seq1  ACGTGCTAGGGAGGGACAGGTGGCTTGCTGGAGTCACAGGACAAGAGGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGCTAGGGAGGGACAGGTGGCTTGCTGGAGTCACAGGACAAGAGGCC  100

seq1  TAGCACACTTAAGGTGCAGGTGTAACCCCCATATGCACACAAAATAAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACACTTAAGGTGCAGGTGTAACCCCCATATGCACACAAAATAAAAT  150

seq1  GTAAAAAACTGTTTCAAAAAAAATAAAATTTGCACATGCCTTTAATCCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAAACTGTTTCAAAAAAAATAAAATTTGCACATGCCTTTAATCCTA  200

seq1  GCACTCAAGCAGTAGCAGGCAGATCTCTGAGTTTGAGGCCAGCCTGGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCAAGCAGTAGCAGGCAGATCTCTGAGTTTGAGGCCAGCCTGGTCT  250

seq1  ACAGAGTAAGTTCCAGGACAGCCAAGACTGCACACAAAACCCAGTCTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGTAAGTTCCAGGACAGCCAAGACTGCACACAAAACCCAGTCTCAA  300

seq1  AAACAAAAAGTAAATAAATAAATACATAAATAATAAAAATAAACAAAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAAAGTAAATAAATAAATACATAAATAATAAAAATAAACAAAAAT  350

seq1  GTAAAAAATTGAACTGGGGCAATAACTGTCAGTTTGATCCCCATGTAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAAATTGAACTGGGGCAATAACTGTCAGTTTGATCCCCATGTAAAA  400

seq1  ATGTATGGAGTGGTGGTTCATATTTGTAACCCTAGCACTGGGGAAGCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATGGAGTGGTGGTTCATATTTGTAACCCTAGCACTGGGGAAGCAGA  450

seq1  GAGAAGCCTTGGGGATAACTGGCCAGCCAGCCTCTTACCTGTGAGCTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGCCTTGGGGATAACTGGCCAGCCAGCCTCTTACCTGTGAGCTCCA  500

seq1  GAGCTTCCGGTCAATGAGAGAGCTCAGCTTAAAAATCAAGGTGTACAG-A  549
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GAGCTTCCGGTCAATGAGAGAGCTCAGCTTAAAAATCAAGGTGTACAGAA  550

seq1  AAGTAAGAAACAACATGAAAAGTTGTCCTCTAGCCTCGGTATGTATGTAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAGAAACAACATGAAAAGTTGTCCTCTAGCCTCGGTATGTATGTAC  600

seq1  ACACACACACACATACACACACACACACACACTCACACAACCTGCACACA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACATACACACACACACACACACTCACACAACCTGCACACA  650

seq1  TATGGAAAACACGTATACATATTAAAATAAGATAAAAATGAAAGGGCCAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAAAACACGTATACATATTAAAATAAGATAAAAATGAAAGGGCCAG  700

seq1  TGGTAGGGCCCTTGTCTAGCATGTACAAAGCCATGGCTTCAAGCTCAGAG  749
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATGGCCCTTGTCTAGCATGTACAAAGCCATGGCTTCAAGCTCAGAG  750

seq1  TGCAAAAGGAAAAAGTAGGAACACAGCCTGTGGAATGCCCTGGAAATTAG  799
      |||||||||||||||||||||||||||||||||||||  || ||||||||
seq2  TGCAAAAGGAAAAAGTAGGAACACAGCCTGTGGAATG-TCTTGAAATTAG  799

seq1  AGGCAACATAGCATG-TTCAATAAATGGCAGGTAATAGTGGGGTGGAAAG  848
      |||||||||| | || |||||||| |||||||  ||||| ||||||||||
seq2  AGGCAACATATCTTGTTTCAATAATTGGCAGG--ATAGT-GGGTGGAAAG  846

seq1  AACGAGGAA  857
      ||| |||||
seq2  AACAAGGAA  855