BAC Information

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BAC

Clone NameB6Ng01-137G16
Chromosome7 (Build37)
Map Location 57,523,153 - 57,524,315
singlet/doubletsinglet
Overlap geneNell1
Upstream gene5330421F07Rik, Dbx1, Htatip2, Prmt3, Slc6a5
Downstream gene4933405O20Rik, EG668766, EG668767, EG668768, EG638046, EG668770, EG668774, LOC668776, LOC434186, LOC546971
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137G16.bB6Ng01-137G16.g
ACCDH936939DH936940
length1,1481,144
definitionDH936939|Mus musculus domesticus DNA, BAC clone: B6Ng01-137G16, 5' end.DH936940|Mus musculus domesticus DNA, BAC clone: B6Ng01-137G16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacccgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactatggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atttatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggattcccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacatccatggaaggagttacagagacaaagtttagagctgagatga
aagtatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcataccctagcaagattttattgaaa
ggacccagatgtagctatctcttctgagactatgccggggcttagcaaca
cagaagtggatgctcacagtcagctaatggatggatcacatggcctccat
ggagagctagagaaagaccaaaggagctaaaggatctgcaccctataggt
ggacacattatgactacagtacctggagttcttgactctagctgcatatg
attcaagatgctagtcggccatcactggaaagaaggccattgacctgact
tatgccaatcggaagcaagccaaaaggggaatggtgtggctatggaat
gaattctgtgagctacaacaccaacccaccaagtacgccgcactcactgt
gcaacaatggcatggctgttatgagggtaaccaactgctttttggattag
agacactcatcaccagaaagaaatcatgcctggcattctaaatttagtag
tccttttatctttatgggcttagaagatacagcttaatcaagaaaaaaaa
tcacaaataagtaaataaacaagccactgttcacaacttattttactttt
taaaataagtgtatttgagtctttgaaacgattctgaaattagtatatag
tgacatcttaaatctagaatttgttcaaatgtctaaaacgtcttaaatat
aaaatctgcttttcccagacttcttccatcatgtcttctaacatacaact
agacatatcaattaaacctttacgataaccctaaagatcactatcctcaa
tttagaggttagagagataaggcttagagtttgtatatccaaagtataca
tgagtaagtgacagtcacattctgactctaaagttcttgttagaactgct
gaaaaaaataattctcctgacatttaaatacctgaggccatagagaaccc
cagcagtaataacctttccaatgatgcttgtagattgtaatccttcttgg
agatattgtcattctgttctaatcagaaattaaataaaatgccaaatctt
atggacatgtgctataaatatctacttctctccatgagcaatagtgaggg
aatcacaaccccctctaggagcatagaaaacaataggactctttagcatt
tctggcttcacttacactgtatcattatagcaaacagaccactcactgcc
cattaatgttcctctccattccaacctccgaagcaagtcacagtttccct
gtaaagctgacctttgatcacactctcaaacctgagtctcattggctctt
cccatctatctgtggtaccttaatctacccaagtcagagaattggaagtc
atgttagccctcacctctggaaactggcctcctgagtccatcagttgtat
gcatgtatttgcatatgcactattacgtacatataagacatttgtgcttg
ggaaggtgatctacttgagcctgtatgataggaaagcacctaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_57523153_57524315
seq2: B6Ng01-137G16.g_66_1209 (reverse)

seq1  GTTAGAGTGCTTTCCTTATACATACAAGGCCTCAAGTATGATTCCACCTT  50
      ||||| ||||||||| ||| ||||||  | |||||||| |||  ||||||
seq2  GTTAG-GTGCTTTCC-TAT-CATACA--GGCTCAAGTA-GAT--CACCTT  42

seq1  CCCAAAGCAACATATGTCTATATGTATACGTAAATATGTGCATATGCATA  100
      ||| |||| ||| |||||| ||| | ||||| |||| ||||||||||| |
seq2  CCC-AAGC-ACAAATGTCT-TATATGTACGT-AATA-GTGCATATGCAAA  87

seq1  TACATGCATACAAACTGATGGGACTCAGGAGGGCCAGTTTTCCAGAGGTG  150
      ||||||||||| ||||||| |||||||||| |||||| ||||||||||||
seq2  TACATGCATAC-AACTGAT-GGACTCAGGA-GGCCAG-TTTCCAGAGGTG  133

seq1  AGGGCTAACATGACTTCCATTTCTCTGACTTGGGTAGATTAAGGTACCAC  200
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AGGGCTAACATGACTTCCAATTCTCTGACTTGGGTAGATTAAGGTACCAC  183

seq1  AGATAGATGGGAAGAGCCAATGAGACTCAGGTTTGAGAGTGTGATCAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGATGGGAAGAGCCAATGAGACTCAGGTTTGAGAGTGTGATCAAAG  233

seq1  GTTCAGCTTTTACAGGGAAACTGTGACTTGCTTCGGAGGTTGGAATGGAG  300
      | ||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  G-TCAGC-TTTACAGGGAAACTGTGACTTGCTTCGGAGGTTGGAATGGAG  281

seq1  AGGAACATTAATGGGCAGTGAGTGGTCTGTTTGCTATAATGATACAGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACATTAATGGGCAGTGAGTGGTCTGTTTGCTATAATGATACAGTGT  331

seq1  AAGTGAAGCCAGAAATGCTAAAGAGTCCTATTGTTTTCTATGCTCCTAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAAGCCAGAAATGCTAAAGAGTCCTATTGTTTTCTATGCTCCTAGA  381

seq1  GGGGGTTGTGATTCCCTCACTATTGCTCATGGAGAGAAGTAGATATTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGTTGTGATTCCCTCACTATTGCTCATGGAGAGAAGTAGATATTTAT  431

seq1  AGCACATGTCCATAAGATTTGGCATTTTATTTAATTTCTGATTAGAACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACATGTCCATAAGATTTGGCATTTTATTTAATTTCTGATTAGAACAG  481

seq1  AATGACAATATCTCCAAGAAGGATTACAATCTACAAGCATCATTGGAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACAATATCTCCAAGAAGGATTACAATCTACAAGCATCATTGGAAAG  531

seq1  GTTATTACTGCTGGGGTTCTCTATGGCCTCAGGTATTTAAATGTCAGGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTACTGCTGGGGTTCTCTATGGCCTCAGGTATTTAAATGTCAGGAG  581

seq1  AATTATTTTTTTCAGCAGTTCTAACAAGAACTTTAGAGTCAGAATGTGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTTTTTTCAGCAGTTCTAACAAGAACTTTAGAGTCAGAATGTGAC  631

seq1  TGTCACTTACTCATGTATACTTTGGATATACAAACTCTAAGCCTTATCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACTTACTCATGTATACTTTGGATATACAAACTCTAAGCCTTATCTC  681

seq1  TCTAACCTCTAAATTGAGGATAGTGATCTTTAGGGTTATCGTAAAGGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACCTCTAAATTGAGGATAGTGATCTTTAGGGTTATCGTAAAGGTTT  731

seq1  AATTGATATGTCTAGTTGTATGTTAGAAGACATGATGGAAGAAGTCTGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGATATGTCTAGTTGTATGTTAGAAGACATGATGGAAGAAGTCTGGG  781

seq1  AAAAGCAGATTTTATATTTAAGACGTTTTAGACATTTGAACAAATTCTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCAGATTTTATATTTAAGACGTTTTAGACATTTGAACAAATTCTAG  831

seq1  ATTTAAGATGTCACTATATACTAATTTCAGAATCGTTTCAAAGACTCAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAGATGTCACTATATACTAATTTCAGAATCGTTTCAAAGACTCAAA  881

seq1  TACACTTATTTTAAAAAGTAAAATAAGTTGTGAACAGTGGCTTGTTTATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTTATTTTAAAAAGTAAAATAAGTTGTGAACAGTGGCTTGTTTATT  931

seq1  TACTTATTTGTGATTTTTTTTCTTGATTAAGCTGTATCTTCTAAGCCCAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTATTTGTGATTTTTTTTCTTGATTAAGCTGTATCTTCTAAGCCCAT  981

seq1  AAAGATAAAAGGACTACTAAATTTAGAATGCCAGGCATGATTTCTTTCTG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATAAAAGGACTACTAAATTTAGAATGCCAGGCATGATTTCTTTCTG  1031

seq1  GTGATGAGTGTCTCTAATCCAAAAAGCAGTTGGTTACCCTCATAACAGCC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGAGTGTCTCTAATCCAAAAAGCAGTTGGTTACCCTCATAACAGCC  1081

seq1  ATGCCATTGTTGCACAGTGAGTGCGGCGTACTTGGTGGGTTGGTGTTGTA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCATTGTTGCACAGTGAGTGCGGCGTACTTGGTGGGTTGGTGTTGTA  1131

seq1  GCTCACAGAATTC  1163
      |||||||||||||
seq2  GCTCACAGAATTC  1144