BAC Information

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BAC

Clone NameB6Ng01-137M22
Chromosome7 (Build37)
Map Location 71,962,281 - 71,963,405
singlet/doubletsinglet
Overlap genenone
Upstream geneKlf13, E030018B13Rik, Trpm1, BB128963, Mtmr15, LOC100041582, Mphosph10, Mcee, Apba2, 5730507A09Rik
Downstream geneNdnl2, Tjp1, Gm1693, EG665234, Tarsl2, Tm2d3, LOC665241
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137M22.bB6Ng01-137M22.g
ACCDH937227DH937228
length1,1141,194
definitionDH937227|Mus musculus domesticus DNA, BAC clone: B6Ng01-137M22, 5' end.DH937228|Mus musculus domesticus DNA, BAC clone: B6Ng01-137M22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctacgcttcctgtggctaatccataaacgtattccccgttcttt
tctcttcttaaggtaatagaacagcacacaacaatagaactgcacagccc
aggcgacccaggcctgagcctgccaccttaaagaaaacatcgtttcccca
gactaccattacctttcaattcacatctcctcagagggctcatgaaactg
ggttctgcgtctcactaaataaagattccaagaagttgggggcactgggg
gaacagacaaaatactctatataacccactatgtgaaagtaaaataaaat
aagtagcagaatggtttgattaaatgtctgcctaaggcccactgttagaa
gctgggtccttgggactgggagagatggcttagcatttaagagcacttgc
tgttcttatagaggagcagaatttgattctcagcacccacattctatctg
gaatcctcatcctgttctggcttctgaggtcaccaggcacatgccagcaa
atagctgtacatataaaaaaataaatacatagtaaaaagtggggatttag
gaggaaagactttagaagttctcaggtcactggaagataacctgcaaggg
ggttgtgagagactggtcctttcttcttttgcttccactcccttgcctgg
ggtaagatgaatagttttatcccaccacacactctagtcgtggtgtgccg
gctccccatggtctagagaagaaggcatctcttgatcacacatttgaaat
actaaaactgtacaacaaactaaaccctttttcttccaagtagattacac
acacacacacacacacacacacacacacacatattaaatcatatcagaaa
ggtgattggcacacataagtggtccccagagccttagattccctgggagt
ttgcaggcctcccaggaacctactgtctgattatattctttacatatgga
aagaagcacatctgagcttaggcagtgacttatcggaatgagatctagag
tagcatgtctgcctgctcccttttgcggtgggttgtgaacagccatgcag
ccctggcactgttctaagcagatccagcatgtagatgatgtcatgatgga
cacaagagaatagt
gaattccctgtcttcctttgcctgttgctattgtaaaataccctgacaaa
gcaattgaaaggaaaaagagtttgttttttctcacagctcaagattgtcc
actatcctggtagggaagtcacagtggcaggagcctgaagcagctggtcg
catgatacccacagtcagatgtggagagggatgagtgctcatgttcaacc
tgacctctcctttttaatcagcctgggaccccagcccaagtgtaattcca
cccacagtaggtggttcttcccaccttaattaacctaatcaagataattg
cccacatgctgccacgtgacactattactgaggggacaggaacaaatatt
tattcacccaagataaagcatggatatcaggccaaattaacaactgccaa
agtccagtttggttgaagcactgagtttgctagggttacttactggagta
tgggtgagaaaggcagttaactgcatcaagcaaaagcctactccagcttg
ggctaatgaaaaccaacactcctctggacaagatgaggtatcttgaaagg
tcagagagtctcctctccagtctttactgcatatataaccttggggaagg
aaaaaaatctgttaagtttcagggatttgctgagacttgtgagttgtttt
cttaagtcttaatgagcccccttctaagatggaagcttcaaagtggaact
tcatgagtcttaacaagtttccctttaaaagttactgagtcttgagggaa
tggccaaccaataactggcccaacttgagacccatcccataggcaagcac
caatccctaacactgtttcatgatactttgttatgcttgcagacaggagc
atgttgtcctctgagaggcctcactcagcagctgactcagatagattcat
tatacccacatcccaacagtgaacagagtttggagactcttagggagaat
aggagaaggatgtgagtccaaaggaatagggttgtggaaagattgactgg
gagggagcagagtagcatgtaagtgaatagtaaaaataatacattaattt
aattaataaatcatggaaaaacaaagttgcggttttagaactctacttat
gacagtaattcattttaggtatttagttaccttgagactagatctatttc
tggcaaccgatgccttctacagtagtcaagtagtgggagtatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_71962281_71963405
seq2: B6Ng01-137M22.b_49_1162

seq1  GAATTCCTACGCTTCCTGTGGCTAATCCATAAACGTATTCCCCGTTCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTACGCTTCCTGTGGCTAATCCATAAACGTATTCCCCGTTCTTT  50

seq1  TCTCTTCTTAAGGTAATAGAACAGCACACAACAATAGAACTGCACAGCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCTTAAGGTAATAGAACAGCACACAACAATAGAACTGCACAGCCC  100

seq1  AGGCGACCCAGGCCTGAGCCTGCCACCTTAAAGAAAACATCGTTTCCCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCGACCCAGGCCTGAGCCTGCCACCTTAAAGAAAACATCGTTTCCCCA  150

seq1  GACTACCATTACCTTTCAATTCACATCTCCTCAGAGGGCTCATGAAACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTACCATTACCTTTCAATTCACATCTCCTCAGAGGGCTCATGAAACTG  200

seq1  GGTTCTGCGTCTCACTAAATAAAGATTCCAAGAAGTTGGGGGCACTGGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTGCGTCTCACTAAATAAAGATTCCAAGAAGTTGGGGGCACTGGGG  250

seq1  GAACAGACAAAATACTCTATATAACCCACTATGTGAAAGTAAAATAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGACAAAATACTCTATATAACCCACTATGTGAAAGTAAAATAAAAT  300

seq1  AAGTAGCAGAATGGTTTGATTAAATGTCTGCCTAAGGCCCACTGTTAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGCAGAATGGTTTGATTAAATGTCTGCCTAAGGCCCACTGTTAGAA  350

seq1  GCTGGGTCCTTGGGACTGGGAGAGATGGCTTAGCATTTAAGAGCACTTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGTCCTTGGGACTGGGAGAGATGGCTTAGCATTTAAGAGCACTTGC  400

seq1  TGTTCTTATAGAGGAGCAGAATTTGATTCTCAGCACCCACATTCTATCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTATAGAGGAGCAGAATTTGATTCTCAGCACCCACATTCTATCTG  450

seq1  GAATCCTCATCCTGTTCTGGCTTCTGAGGTCACCAGGCACATGCCAGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCTCATCCTGTTCTGGCTTCTGAGGTCACCAGGCACATGCCAGCAA  500

seq1  ATAGCTGTACATATAAAAAAATAAATACATAGTAAAAAGTGGGGATTTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTGTACATATAAAAAAATAAATACATAGTAAAAAGTGGGGATTTAG  550

seq1  GAGGAAAGACTTTAGAAGTTCTCAGGTCACTGGAAGATAACCTGCAAGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAAGACTTTAGAAGTTCTCAGGTCACTGGAAGATAACCTGCAAGGG  600

seq1  GGTTGTGAGAGACTGGTCCTTTCTTCTTTTGCTTCCACTCCCTTGCCTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTGAGAGACTGGTCCTTTCTTCTTTTGCTTCCACTCCCTTGCCTGG  650

seq1  GGTAAGATGAATAGTTTTATCCCACCACACACTCTAGTCGTGGTGTGCCG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAGATGAATAGTTTTATCCCACCACACACTCTAGTCGTGGTGTGCCG  700

seq1  GCTCCCCATGGTCTAGAGAAGAAGGCATCTCTTGATCACACATTTGAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCCATGGTCTAGAGAAGAAGGCATCTCTTGATCACACATTTGAAAT  750

seq1  ACTAAAACTGTACAACAAACTAAACCCTTTTTCTTCCAAGTAGATTACAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAACTGTACAACAAACTAAACCCTTTTTCTTCCAAGTAGATTACAC  800

seq1  ACACACACACACACACACACACACACACACATATTAAATCATATCAGAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACATATTAAATCATATCAGAAA  850

seq1  GGTGATTGGCACACATAAGTGGTCCCCAGAGCCTTAGATTCCCTGGGAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATTGGCACACATAAGTGGTCCCCAGAGCCTTAGATTCCCTGGGAGT  900

seq1  TTGCAGGCCTCCCAGGAACCTACTGTCTGATTATATTCTTTACATATGGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGGCCTCCCAGGAACCTACTGTCTGATTATATTCTTTACATATGGA  950

seq1  AAGAAGGCACACCTGAGCTTAGGCAGTGACTTATCGGAATGAGATCTTAG  1000
      ||||| ||||| |||||||||||||||||||||||||||||||||| |||
seq2  AAGAA-GCACATCTGAGCTTAGGCAGTGACTTATCGGAATGAGATC-TAG  998

seq1  AGTAAGCAATGTCTGCCTGCTCCCTTTTGCGGTGGGTTGTGAACAGCCAT  1050
      ||| ||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AGT-AGC-ATGTCTGCCTGCTCCCTTTTGCGGTGGGTTGTGAACAGCCAT  1046

seq1  GCAGGCCCTGGGCACTGTTCCTAAGCAGACCCCAGCATGTAGGATGGTAT  1100
      ||| ||||| ||||||||| |||||||||  |||||||||| ||||  ||
seq2  GCA-GCCCT-GGCACTGTT-CTAAGCAGA-TCCAGCATGTA-GATG--AT  1089

seq1  GTCATGTAGGACCACAAGAG-ATAGT  1125
      ||||||  ||| |||||||| |||||
seq2  GTCATGATGGA-CACAAGAGAATAGT  1114