BAC Information

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BAC

Clone NameB6Ng01-138M18
Chromosome7 (Build37)
Map Location 137,481,724 - 137,529,672
singlet/doubletdoublet
Overlap geneLOC546005
Upstream genePpapdc1a, Brwd2, LOC100043150, Fgfr2
Downstream geneAte1, LOC100043163, Nsmce4a, Tacc2, LOC619876, Btbd16, EG434249, Plekha1, Htra1, Dmbt1, 4933402N03Rik, 5430419D17Rik, LOC546006, LOC100043173, Cuzd1, 1700007K09Rik, 1700063I17Rik, 2310057M21Rik, Pstk
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-138M18.bB6Ng01-138M18.g
ACCDH937952DH937953
length1,117303
definitionDH937952|Mus musculus domesticus DNA, BAC clone: B6Ng01-138M18, 5' end.DH937953|Mus musculus domesticus DNA, BAC clone: B6Ng01-138M18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(137,481,724 - 137,482,846)(137,529,370 - 137,529,672)
sequence
gaattccaggacatccagagctacacagagaaaccctgtctcagaaaaca
aaacaaaacaaaaaaaaaccaacccccttcccctacctcctcccccaaga
aaagaaaaagagaatgaatctgagccaagcttggtgacttgagtttgatc
ccagggactcacctggtgaaaggagagaaatgacactttcaaactgtctt
gtgtcagacatgagccatggcatgcactgcaccacacacacacacacaca
cacacacacacacacacacacacacttaaattgaaaatgcaatttaaaaa
atagaatgaacctgatatctgagattagcatagactcctcaaacatggaa
gacagaggtaggagaatcattagaacaaaacaaagcaggaacctgaatgg
gtctgaacaactcagggaaatattcctgaagaatacccaggaacgagcag
tgtgcagggtcagggagccagaggaaacgcctgtggttcacgccatacat
accactgctgtttccctgcagcaccagggcaggcagcgttcctactcaaa
agtctagcaataacaactttcattctaatctgtgcactgtcttttcaagc
tcaaaggagtgagttccttgatgttttttgggccccaacttctctgcaaa
atagagactttttagatgctccccctcaacacacaacttgagaaggcctg
gattacaatgcaaatataaacactccctttgaaaccaaagccaagcttag
gaacctgtgaggatagtttatttgtcccaacccggccccactccaaccct
cctcccttttgcccttccgatcagaaagtgccagggtgaccctctgatca
gggagctcttcctgtcccctcttcccctctgctccatcctccagggctgg
ggaattgccaatcatcttcactaatcatctgctgatttctaattgataac
catactagctctccctccatcaggcacaacatctgccatgcagatattgt
tatagaaattaaagatacagatgaacaggagttgggggagaggctcagtt
gtaagaaaagaagtgagcataagaacctggagtttcatcccagtttaaaa
aaaaaaaaaaaaagctg
ttcatgaggtccaattcatcacactttgttaattcactactcagtaagcc
tgaatagcatctcaactaagggagctttttgaccatgaaacaaaaccatc
ccagtcgtctcagtcatacatacaggattccacgtgtccgtccactgtct
tctcagacatggagagatggccagactgaagagctgttttactaacctga
gtgtgcatgcgtgtgtgcgtgtgtgtgtgtgtgtgtgtgtgtacacgtgt
gtgtgtttgtgtgagtgcgtgtgtgtgtgcatgtgtgtgggtgtgtgtgg
gtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_137481724_137482846
seq2: B6Ng01-138M18.b_45_1161

seq1  GAATTCCAGGACATCCAGAGCTACACAGAGAAACCCTGTCTCAGAAAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACATCCAGAGCTACACAGAGAAACCCTGTCTCAGAAAACA  50

seq1  AAACAAAACAAAAAAAAACCAACCCCCTTCCCCTACCTCCTCCCCCAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAACAAAAAAAAACCAACCCCCTTCCCCTACCTCCTCCCCCAAGA  100

seq1  AAAGAAAAAGAGAATGAATCTGAGCCAAGCTTGGTGACTTGAGTTTGATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAAAGAGAATGAATCTGAGCCAAGCTTGGTGACTTGAGTTTGATC  150

seq1  CCAGGGACTCACCTGGTGAAAGGAGAGAAATGACACTTTCAAACTGTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGACTCACCTGGTGAAAGGAGAGAAATGACACTTTCAAACTGTCTT  200

seq1  GTGTCAGACATGAGCCATGGCATGCACTGCACCACACACACACACACACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCAGACATGAGCCATGGCATGCACTGCACCACACACACACACACACA  250

seq1  CACACACACACACACACACACACACTTAAATTGAAAATGCAATTTAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACTTAAATTGAAAATGCAATTTAAAAA  300

seq1  ATAGAATGAACCTGATATCTGAGATTAGCATAGACTCCTCAAACATGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAATGAACCTGATATCTGAGATTAGCATAGACTCCTCAAACATGGAA  350

seq1  GACAGAGGTAGGAGAATCATTAGAACAAAACAAAGCAGGAACCTGAATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAGGTAGGAGAATCATTAGAACAAAACAAAGCAGGAACCTGAATGG  400

seq1  GTCTGAACAACTCAGGGAAATATTCCTGAAGAATACCCAGGAACGAGCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAACAACTCAGGGAAATATTCCTGAAGAATACCCAGGAACGAGCAG  450

seq1  TGTGCAGGGTCAGGGAGCCAGAGGAAACGCCTGTGGTTCACGCCATACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCAGGGTCAGGGAGCCAGAGGAAACGCCTGTGGTTCACGCCATACAT  500

seq1  ACCACTGCTGTTTCCCTGCAGCACCAGGGCAGGCAGCGTTCCTACTCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTGCTGTTTCCCTGCAGCACCAGGGCAGGCAGCGTTCCTACTCAAA  550

seq1  AGTCTAGCAATAACAACTTTCATTCTAATCTGTGCACTGTCTTTTCAAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTAGCAATAACAACTTTCATTCTAATCTGTGCACTGTCTTTTCAAGC  600

seq1  TCAAAGGAGTGAGTTCCTTGATGTTTTTTGGGCCCCAACTTCTCTGCAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGGAGTGAGTTCCTTGATGTTTTTTGGGCCCCAACTTCTCTGCAAA  650

seq1  ATAGAGACTTTTTAGATGCTCCCCCTCAACACACAACTTGAGAAGGCCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGACTTTTTAGATGCTCCCCCTCAACACACAACTTGAGAAGGCCTG  700

seq1  GATTACAATGCAAATATAAACACTCCCTTTGAAACCAAAGCCAAGCTTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTACAATGCAAATATAAACACTCCCTTTGAAACCAAAGCCAAGCTTAG  750

seq1  GAACCTGTGAGGATAGTTTATTTGTCCCAACCCGGCCCCACTCCAACCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTGTGAGGATAGTTTATTTGTCCCAACCCGGCCCCACTCCAACCCT  800

seq1  CCTCCCTTTTGCCCTTCCGATCAGAAAGTGCCAGGGTGACCCTCTGATCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTTTTGCCCTTCCGATCAGAAAGTGCCAGGGTGACCCTCTGATCA  850

seq1  GGGAGCTCTTCCTGTCCCCTCTTCCCCTCTGCTCCATCCTCCAGGGCTGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCTCTTCCTGTCCCCTCTTCCCCTCTGCTCCATCCTCCAGGGCTGG  900

seq1  GGAATTGCCAATCATCTTCACTAATCATCTGCTGATTTCTAATTGATAAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTGCCAATCATCTTCACTAATCATCTGCTGATTTCTAATTGATAAC  950

seq1  CATACTAGCTCTCCCTCCATCAGGGCCACAACATCTGCCATGCAAGATAT  1000
      ||||||||||||||||||||||||  ||||||||||||||||| ||||||
seq2  CATACTAGCTCTCCCTCCATCAGG--CACAACATCTGCCATGC-AGATAT  997

seq1  TGTTATAGAAATTAAAGATACAGATGAACAGGAGTTGGGGAGAG-GGCTC  1049
      |||||||||||||||||||||||||||||||||||||||| ||| |||||
seq2  TGTTATAGAAATTAAAGATACAGATGAACAGGAGTTGGGG-GAGAGGCTC  1046

seq1  AGTTTGTAAGAACAGAAGTGAGCATAAAGACCT-GAGTTTCAATCCCCAG  1098
      || ||||||||| ||||||||||||||  |||| ||||||||   |||||
seq2  AG-TTGTAAGAAAAGAAGTGAGCATAAGAACCTGGAGTTTCA--TCCCAG  1093

seq1  TTTAAAAAAAAAAAAAAAAAAGCTG  1123
      ||| |||||||||||||||||||||
seq2  TTT-AAAAAAAAAAAAAAAAAGCTG  1117

seq1: chr7_137529370_137529672
seq2: B6Ng01-138M18.g_74_376 (reverse)

seq1  CACCCACACACACCCACACACATGCACACACACACGCACTCACACAAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCACACACACCCACACACATGCACACACACACGCACTCACACAAACA  50

seq1  CACACACGTGTACACACACACACACACACACACACGCACACACGCATGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACGTGTACACACACACACACACACACACACGCACACACGCATGCA  100

seq1  CACTCAGGTTAGTAAAACAGCTCTTCAGTCTGGCCATCTCTCCATGTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAGGTTAGTAAAACAGCTCTTCAGTCTGGCCATCTCTCCATGTCTG  150

seq1  AGAAGACAGTGGACGGACACGTGGAATCCTGTATGTATGACTGAGACGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGACAGTGGACGGACACGTGGAATCCTGTATGTATGACTGAGACGAC  200

seq1  TGGGATGGTTTTGTTTCATGGTCAAAAAGCTCCCTTAGTTGAGATGCTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATGGTTTTGTTTCATGGTCAAAAAGCTCCCTTAGTTGAGATGCTAT  250

seq1  TCAGGCTTACTGAGTAGTGAATTAACAAAGTGTGATGAATTGGACCTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCTTACTGAGTAGTGAATTAACAAAGTGTGATGAATTGGACCTCAT  300

seq1  GAA  303
      |||
seq2  GAA  303