BAC Information

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BAC

Clone NameB6Ng01-140K19
Chromosome7 (Build37)
Map Location 135,611,666 - 135,785,851
singlet/doubletdoublet
Overlap geneBag3, EG639030, Inpp5f
Upstream genePrr14, Fbs1, 1700008J07Rik, LOC100043597, D030022P06Rik, Phkg2, Gm166, Rnf40, 1700120K04Rik, Zfp629, Bcl7c, Ctf1, Ctf2, Fbxl19, Tmem142c, Setd1a, Hsd3b7, Stx1b2, Stx4a, Zfp668, Zfp646, BC039632, Vkorc1, Bckdk, Myst1, Prss8, Prss36, Fus, Pycard, Trim72, LOC436010, EG668675, Itgam, Itgax, Itgad, Cox6a2, LOC100043133, Armc5, Tgfb1i1, Slc5a2, BC017158, EG628781, Rgs10, LOC100043643, Tial1
Downstream geneLOC100043651, 1110007A13Rik, Sec23ip, LOC210714, LOC100043144, Ppapdc1a, Brwd2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-140K19.bB6Ng01-140K19.g
ACCDH939337DH939338
length8931,029
definitionDH939337|Mus musculus domesticus DNA, BAC clone: B6Ng01-140K19, 5' end.DH939338|Mus musculus domesticus DNA, BAC clone: B6Ng01-140K19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(135,611,666 - 135,612,506)(135,784,818 - 135,785,851)
sequence
gaattctgtgagcacacatacagggaggcaaaatacccgcacatataaaa
aaaaaaacttacaaaaaaaatgacacaccattaccaagttaataccattc
caagtatgcaaagttggttcactatatgcaaataagtaagtgtaattttg
tacataaggaggacagaaatcatatcaccattcaaattgatgcagaacaa
gtctttaacaaacctcatttatttttcttgatagtaatcctgagtaaagg
ctagcaaggtcacttggtacaggggcctgtcacaaagcctgatagcctga
atttgattctctagaacaacaaataagatataataataaattgttaaaag
tcccgaagaaatcagaaataaaaggaacaaacctgaatatgacattatat
gacagacattatatgacagatatataggtcattacactaaatgcagcatt
caccctaatggaatgaaacaagggtgccccaaccactcttagccaatatc
gtactcgaagtctcaggtagaggaataagacaaaagaaataaagaaatac
aaatagaaaaagaaagcacccagaaattatctctatttgaagatgacaca
accctatacttaaaagactcccagagactccaccagaaaactcctaggtc
tgataaactcttcccataaagtagaaggatacaaaaattagtatctttcc
tatatactaataacaaagttactgaaaagaaaccaaaagaaaaaaaatcc
cattcccaatagcttaaaaaaaaaaaaaaaaaaacttagatcgaaactcc
ccaagagagtgattaacctcaacaataacaactttaagactcagaagaag
aaaggaaggaaactaaaggatgggaagatgtctgtgcacctgg
gaattctctaggatggactttaatctagtatagctggctttatttattgt
tttttaaagaattaattatttttggttgtgtataatttatgcaagtatgt
atatctacaggtggataccaatgcccaaaaagtccagaagcattggatcc
cctggagctggtggctgttgagtcacctgacatgagttctggaaatctaa
ctcaggtcctctgcacggcctgagtatgtgctctcaactgctgagccacc
tctagcccaacaagtaatattatttaaaaaaaacaaaaaccttaaagaca
aaggtacaaaggaagggaagcccacgtgaagacagggaccacagccatct
ataagccaaggacagaggtcctggaagaaaccagtcctgctagctcttta
gtctccagcattataggaagatgaaattctgttgtttaatgcctcccaca
acctagcgaacctgtatcgttctagaagtcacgaaagctgctgctatatt
ccttggagtccagagttcagtgacaaccatgagcagcagcacagctcacc
cacgccacttttagactgacaatgacatctgttcaaataaaatcatgttc
ccgtcacactaggcaagaacaggagtgcacgcattaatatgtagagtcag
taggaggaaagagaaaaaggggagcttacatacagatgtcttagttccct
catctcctctcatcacccccgaatgataagatatccccatgagaaaatgt
ctccaaataccagctcaattctgacacataaggagcgcagctccttccgg
ccagtccgactctgagcaagacagagagggatgaggcagcgtggaggaag
aggatgaaagggaagagaagggcagatcttctttctcctcatgaggagca
ggtggagcagcacagggaagacagactgtgggaacatgggagagctaaga
atcatacagagggtctagatcttcatcttgcttctcctatggcttccttc
ctttaaaccaatttgttaagtggccatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_135611666_135612506
seq2: B6Ng01-140K19.b_46_885

seq1  GAATTCTGTGAGCACACATACAGGCAGGCAAAATACCCACACATATAAAA  50
      |||||||||||||||||||||||| ||||||||||||| |||||||||||
seq2  GAATTCTGTGAGCACACATACAGGGAGGCAAAATACCCGCACATATAAAA  50

seq1  AAAAAAACTTACAAAAAAAATGACACACCATTACCAAGTTAATACCATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAACTTACAAAAAAAATGACACACCATTACCAAGTTAATACCATTC  100

seq1  CAAGTATGCAAAGTTGGTTCACTATATGCAAATAAGTAAGTGTAATTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTATGCAAAGTTGGTTCACTATATGCAAATAAGTAAGTGTAATTTTG  150

seq1  TACATAAGGAGGACAGAAATCATATCACCATTCAAATTGATGCAGAACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAAGGAGGACAGAAATCATATCACCATTCAAATTGATGCAGAACAA  200

seq1  GTCTTTAACAAACCTCATTTATTTTTCTTGATAGTAATCCTGAGTAAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTAACAAACCTCATTTATTTTTCTTGATAGTAATCCTGAGTAAAGG  250

seq1  CTAGCAAGGTCACTTGGTACAGGGGCCTGTCACAAAGCCTGATAGCCTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCAAGGTCACTTGGTACAGGGGCCTGTCACAAAGCCTGATAGCCTGA  300

seq1  ATTTGATTCTCTAGAACAACAAATAAGATATAATAATAAATTGTTAAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGATTCTCTAGAACAACAAATAAGATATAATAATAAATTGTTAAAAG  350

seq1  TCCCGAAGAAATCAGAAATAAAAGGAACAAACCTGAATATGACATTATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGAAGAAATCAGAAATAAAAGGAACAAACCTGAATATGACATTATAT  400

seq1  GACAGACATTATATGACAGATATATAGGTCATTACACTAAATGCAGCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGACATTATATGACAGATATATAGGTCATTACACTAAATGCAGCATT  450

seq1  CACCCTAATGGAATGAAACAAGGGTGCCCCAACCACTCTTATCCAATATC  500
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CACCCTAATGGAATGAAACAAGGGTGCCCCAACCACTCTTAGCCAATATC  500

seq1  GTACTCGAAGTCTCAGCTAGAGGAATAAGACAAAAGAAATAAAGAAATAC  550
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GTACTCGAAGTCTCAGGTAGAGGAATAAGACAAAAGAAATAAAGAAATAC  550

seq1  AAATAGAAAAAGAAAGCACCCAGAAATTATCTCTATTTGAAGATGACACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGAAAAAGAAAGCACCCAGAAATTATCTCTATTTGAAGATGACACA  600

seq1  ACCCTATACTTAAAAGACTCCCAGAGACTCCACCAGAAAACTCCTAGGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTATACTTAAAAGACTCCCAGAGACTCCACCAGAAAACTCCTAGGTC  650

seq1  TGATAAACTCTTCCCATAAAGTAGAAGGATACAAAAATTAGTATCTTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAACTCTTCCCATAAAGTAGAAGGATACAAAAATTAGTATCTTTCC  700

seq1  TATATACTAATAACAAAGTTACTGAAAAGAAACCAAAAGAAAAAAAATCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATACTAATAACAAAGTTACTGAAAAGAAACCAAAAGAAAAAAAATCC  750

seq1  CATTCCCAATAGCTTAAAAAAAAAAAAAAAAAAAACTTAGATCGAAACTC  800
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CATTCCCAATAGCTT-AAAAAAAAAAAAAAAAAAACTTAGATCGAAACTC  799

seq1  CCCAAGAAAGTGATTAACCTCAACAATAACAACTTTAAGAC  841
      ||||||| |||||||||||||||||||||||||||||||||
seq2  CCCAAGAGAGTGATTAACCTCAACAATAACAACTTTAAGAC  840

seq1: chr7_135784818_135785851
seq2: B6Ng01-140K19.g_67_1095 (reverse)

seq1  TCATGGCCACTTAACAGATTTGGTTTTAAAAGAAGGAAGCCATAGGAGAA  50
      |||||||||||||||| |||  | |||||| |||||||||||||||||||
seq2  TCATGGCCACTTAACAAATT--GGTTTAAAGGAAGGAAGCCATAGGAGAA  48

seq1  GC-AGATGGAGATCTGGGCCCTCTGTTGTGCTTTCTCTGCTCTCCCATGT  99
      || ||||| |||||| | ||||||| | ||  ||||  ||||||||||||
seq2  GCAAGATGAAGATCTAGACCCTCTG-TATG-ATTCTTAGCTCTCCCATGT  96

seq1  TCCCACAGTCCTGTCTTCCCTGTGCTGCTCCACCCTGCTCCTCACTGAG-  148
      ||||||||| |||||||||||||||||||||| ||||||||||| |||| 
seq2  TCCCACAGT-CTGTCTTCCCTGTGCTGCTCCA-CCTGCTCCTCA-TGAGG  143

seq1  -GGAAGGAGATCTGCCCTTCTCTTCCCTTTCATCCTCTTCCTCCACGCTG  197
       | ||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAAGATCTGCCCTTCTCTTCCCTTTCATCCTCTTCCTCCACGCTG  193

seq1  CCTCATCCCTCCTCTGTCTTGCTCAGAGTCGGACTGGCCGGAAGGAGCTG  247
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CCTCATCCCT-CTCTGTCTTGCTCAGAGTCGGACTGGCCGGAAGGAGCTG  242

seq1  CGCTCCTTATGTGTCAGAATTGAGCTGGTATTTTGGGGACATTTTCTCAT  297
      |||||||||||||||||||||||||||||| ||||| |||||||||||||
seq2  CGCTCCTTATGTGTCAGAATTGAGCTGGTA-TTTGGAGACATTTTCTCAT  291

seq1  GGGGATATCTTATCATTCGGGGGTGATGAGAGGAGATGAGGGAACTAAGA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATATCTTATCATTCGGGGGTGATGAGAGGAGATGAGGGAACTAAGA  341

seq1  CATCTGTATGTAAGCTCCCC-TTTTCTCTTTCCTCCTACTGACTCTACAT  396
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CATCTGTATGTAAGCTCCCCTTTTTCTCTTTCCTCCTACTGACTCTACAT  391

seq1  ATTAATGCGTGCACTCCTGTTCTTGCCTAGTGTGACGGGAACATGATTTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATGCGTGCACTCCTGTTCTTGCCTAGTGTGACGGGAACATGATTTT  441

seq1  ATTTGAACAGATGTCATTGTCAGTCTAAAAGTGGCGTGGGTGAGCTGTGC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAACAGATGTCATTGTCAGTCTAAAAGTGGCGTGGGTGAGCTGTGC  491

seq1  TGCTGCTCATGGTTGTCACTGAACTCTGGACTCCAAGGAATATAGCAGCA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCTCATGGTTGTCACTGAACTCTGGACTCCAAGGAATATAGCAGCA  541

seq1  GCTTTCGTGACTTCTAGAACGATACAGGTTCGCTAGGTTGTGGGAGGCAT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCGTGACTTCTAGAACGATACAGGTTCGCTAGGTTGTGGGAGGCAT  591

seq1  TAAACAACAGAATTTCATCTTCCTATAATGCTGGAGACTAAAGAGCTAGC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAACAGAATTTCATCTTCCTATAATGCTGGAGACTAAAGAGCTAGC  641

seq1  AGGACTGGTTTCTTCCAGGACCTCTGTCCTTGGCTTATAGATGGCTGTGG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTGGTTTCTTCCAGGACCTCTGTCCTTGGCTTATAGATGGCTGTGG  691

seq1  TCCCTGTCTTCACGTGGGCTTCCCTTCCTTTGTACCTTTGTCTTTAAGGT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGTCTTCACGTGGGCTTCCCTTCCTTTGTACCTTTGTCTTTAAGGT  741

seq1  TTTTGTTTTTTTTAAATAATATTACTTGTTGGGCTAGAGGTGGCTCAGCA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTTTTTAAATAATATTACTTGTTGGGCTAGAGGTGGCTCAGCA  791

seq1  GTTGAGAGCACATACTCAGGCCGTGCAGAGGACCTGAGTTAGATTTCCAG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGAGCACATACTCAGGCCGTGCAGAGGACCTGAGTTAGATTTCCAG  841

seq1  AACTCATGTCAGGTGACTCAACAGCCACCAGCTCCAGGGGATCCAATGCT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCATGTCAGGTGACTCAACAGCCACCAGCTCCAGGGGATCCAATGCT  891

seq1  TCTGGACTTTTTGGGCATTGGTATCCACCTGTAGATATACATACTTGCAT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGACTTTTTGGGCATTGGTATCCACCTGTAGATATACATACTTGCAT  941

seq1  AAATTATACATAACCAAAAATAATTAATTCTTTAAAAAACAATAAATAAA  996
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AAATTATACACAACCAAAAATAATTAATTCTTTAAAAAACAATAAATAAA  991

seq1  GCCAGCTATACTAGATTAAAGTCCATCCTAGAGAATTC  1034
      ||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCTATACTAGATTAAAGTCCATCCTAGAGAATTC  1029