BAC Information

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BAC

Clone NameB6Ng01-141A23
Chromosome7 (Build37)
Map Location 90,989,302 - 90,990,431
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC619808, Rkhd3, LOC619909, A530021J07Rik, EG666160, Tmc3, Stard5, Il16, Phgdh-ps1, LOC666170, 1700026D08Rik
Downstream geneMesdc1, Mesdc2, 9930013L23Rik, 2210412D01Rik, Arnt2, LOC100039239, Fah, Zfand6, 2610206C17Rik, EG620480
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-141A23.b
ACCDH939624
length1,142
definitionDH939624|Mus musculus domesticus DNA, BAC clone: B6Ng01-141A23, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctaattacctaaatataggcaggtcatttgtttcacgtgggga
actggtcagagaaggtgtttctctgtgagaacttccagaggcttgattat
ctctagactttacataaagactaaatgcatgtgtaaagatagtgatgccc
gttccatgttgaaaaattctagatgctggacacagtagcataaattgtaa
tccttacaattcagaggaggaggcacagaaataaggagttgagaatacat
gagaccttacctcagaaacacacaacacctagaaaaaggaggcagaggat
caggaaagagaagaatagaaaagaaaacaaaagataaagaaaaaatcgag
aagatatatgtgcaggctgctatgctttgaatcttcatgtcctgagtgtt
aaaggctttgatccctaactcatggcaccaagcctttatcacatgcaaag
tactagaaacgttaaaagatgggacctagcaagggatcttcaggtcaaca
gagccacacctttgagggaacagtgagacccagatcatgagtccagacct
gctctgctactgggatacttagcctcatcacccacccaaactaagagggc
acaaatcatcatgtcctgggtcttcagaacggtgttccatgatacccttc
tctcttgagaagctggtatctgagtcactagtgatctgaagtggtagagt
gtcagtcgactggcaaacatggctggagcttctcctttctcatggccctg
gatagaacctgctgacagtgtagcaagaggaatgaggaaagaccagtcca
tatagctgtctacatagcctacatcttgggacatatccttcttactgtgg
ggaacttacaggaccctcagtcttcacttttgtatgcctttaggtcaact
gctttctatgggcactatgttcttaataatcaaaaacaaaatgctggtgg
tggcagatatttctgcttgtctctgctgcagaaactttctcaatcttaac
ctgacaagactgtggttgctgctttaggacaatgaaaccttccatttgcc
tttccaacagaatcactttctcttggtgagaagtgctttccttgcttctc
atcaaggccttctagatggccatatattacaccaggctctgc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_90989302_90990431
seq2: B6Ng01-141A23.b_44_1185

seq1  GAATTCTCTAATTACCTAAATATAGGCAGGTCATTTGTTTCACGTGGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAATTACCTAAATATAGGCAGGTCATTTGTTTCACGTGGGGA  50

seq1  ACTGGTCAGAGAAGGTGTTTCTCTGTGAGAACTTCCAGAGGCTTGATTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTCAGAGAAGGTGTTTCTCTGTGAGAACTTCCAGAGGCTTGATTAT  100

seq1  CTCTAGACTTTACATAAAGACTAAATGCATGTGTAAAGATAGTGATGCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGACTTTACATAAAGACTAAATGCATGTGTAAAGATAGTGATGCCC  150

seq1  GTTCCATGTTGAAAAATTCTAGATGCTGGACACAGTAGCATAAATTGTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCATGTTGAAAAATTCTAGATGCTGGACACAGTAGCATAAATTGTAA  200

seq1  TCCTTACAATTCAGAGGAGGAGGCACAGAAATAAGGAGTTGAGAATACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTACAATTCAGAGGAGGAGGCACAGAAATAAGGAGTTGAGAATACAT  250

seq1  GAGACCTTACCTCAGAAACACACAACACCTAGAAAAAGGAGGCAGAGGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCTTACCTCAGAAACACACAACACCTAGAAAAAGGAGGCAGAGGAT  300

seq1  CAGGAAAGAGAAGAATAGAAAAGAAAACAAAAGATAAAGAAAAAATCGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAAGAGAAGAATAGAAAAGAAAACAAAAGATAAAGAAAAAATCGAG  350

seq1  AAGATATATGTGCAGGCTGCTATGCTTTGAATCTTCATGTCCTGAGTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATATATGTGCAGGCTGCTATGCTTTGAATCTTCATGTCCTGAGTGTT  400

seq1  AAAGGCTTTGATCCCTAACTCATGGCACCAAGCCTTTATCACATGCAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCTTTGATCCCTAACTCATGGCACCAAGCCTTTATCACATGCAAAG  450

seq1  TACTAGAAACGTTAAAAGATGGGACCTAGCAAGGGATCTTCAGGTCAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGAAACGTTAAAAGATGGGACCTAGCAAGGGATCTTCAGGTCAACA  500

seq1  GAGCCACACCTTTGAGGGAACAGTGAGACCCAGATCATGAGTCCAGACCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCACACCTTTGAGGGAACAGTGAGACCCAGATCATGAGTCCAGACCT  550

seq1  GCTCTGCTACTGGGATACTTAGCCTCATCACCCACCCAAACTAAGAGGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGCTACTGGGATACTTAGCCTCATCACCCACCCAAACTAAGAGGGC  600

seq1  ACAAATCATCATGTCCTGGGTCTTCAGAACGGTGTTCCATGATACCCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATCATCATGTCCTGGGTCTTCAGAACGGTGTTCCATGATACCCTTC  650

seq1  TCTCTTGAGAAGCTGGTATCTGAGTCACTAGTGATCTGAAGTGGTAGAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGAGAAGCTGGTATCTGAGTCACTAGTGATCTGAAGTGGTAGAGT  700

seq1  GTCAGTCGACTGGCAAACATGGCTGGAGCTTCTCC-TTCCCATGGCCCTG  749
      ||||||||||||||||||||||||||||||||||| ||| ||||||||||
seq2  GTCAGTCGACTGGCAAACATGGCTGGAGCTTCTCCTTTCTCATGGCCCTG  750

seq1  GATAGAACCTGCTGACAGTGTAGCAAGAGGAATGAGGAAAGACCAGTCCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGAACCTGCTGACAGTGTAGCAAGAGGAATGAGGAAAGACCAGTCCA  800

seq1  TATAGCTGTCTACATAGCCTACATCTT-GGACATATCCTTCTTACTGTGG  848
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TATAGCTGTCTACATAGCCTACATCTTGGGACATATCCTTCTTACTGTGG  850

seq1  GAAACTTACA-GACCCTCAGTCTTCACTTTTGTATGCCTTTAGGTCAACT  897
      | |||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GGAACTTACAGGACCCTCAGTCTTCACTTTTGTATGCCTTTAGGTCAACT  900

seq1  GCTTTCTATGGCCACTATGTTCTT-ATTATCAAAA--CAAATGCTGGTGG  944
      ||||||||||| |||||||||||| || |||||||   ||||||||||||
seq2  GCTTTCTATGGGCACTATGTTCTTAATAATCAAAAACAAAATGCTGGTGG  950

seq1  TGGCAGATATTTCTGCTTGTCTCTGCTGCAGAAAC-TTCCCAATCTAAAC  993
      ||||||||||||||||||||||||||||||||||| ||| |||||| |||
seq2  TGGCAGATATTTCTGCTTGTCTCTGCTGCAGAAACTTTCTCAATCTTAAC  1000

seq1  CTGACAAGACTGTGGTTGCTGCTATAGGGACAATGAACCCTTCCA-TTGC  1042
      ||||||||||||||||||||||| || |||||||||| ||||||| ||||
seq2  CTGACAAGACTGTGGTTGCTGCTTTA-GGACAATGAAACCTTCCATTTGC  1049

seq1  C-TTCCAACAGGATCACCTTCTCCCTGGTGAG-AGTGC-TTCCCTGCTCC  1089
      | ||||||||| ||||| |||| | ||||||| ||||| |||| ||||  
seq2  CTTTCCAACAGAATCACTTTCT-CTTGGTGAGAAGTGCTTTCCTTGCT-T  1097

seq1  CTCATCAAGGCCTTTCTAG-TGG-CATA-ATTACAC--AGCTCTGC  1130
      |||||||||||| |||||| ||| |||| |||||||   |||||||
seq2  CTCATCAAGGCC-TTCTAGATGGCCATATATTACACCAGGCTCTGC  1142