BAC Information

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BAC

Clone NameB6Ng01-141O19
Chromosome7 (Build37)
Map Location 22,272,854 - 22,399,389
singlet/doubletdoublet
Overlap geneLOC100043596, LOC667358, LOC100043016, LOC100043602, LOC100043604
Upstream geneLOC100042980, EG381936, LOC100043559, LOC667311, LOC100043561, LOC667302, EG667292, LOC100043566, LOC100043569, EG436135, LOC100042996, EG667273, EG667268, EG667262, EG667259, LOC100043574, LOC100043576, Gm1447, LOC100043006, LOC100043583, EG435953, LOC673902, EG667240, EG435951, Gm1446, LOC381937, LOC100043588, LOC670764, EG667215, LOC100043013, LOC621561, EG667199, EG621510, LOC667186, EG628475, LOC100043595
Downstream geneEG667378, LOC100043607, LOC100043019, LOC100043025, EG667404, EG435940, LOC100043026, EG545929, LOC667421, LOC100043614, LOC667431, LOC100043029, EG620736, EG667444, LOC100043033, LOC100043037, EG667464, EG667469, EG667472, EG667094, LOC100043625, LOC100043626, LOC100043043, LOC100043048, LOC100043632, EG667485, V1rd14, LOC100043051, LOC100043058, EG435947, EG667504, EG667512, LOC100043061, LOC100043638, LOC667527
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-141O19.bB6Ng01-141O19.g
ACCDH940254DH940255
length1,0261,065
definitionDH940254|Mus musculus domesticus DNA, BAC clone: B6Ng01-141O19, 5' end.DH940255|Mus musculus domesticus DNA, BAC clone: B6Ng01-141O19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,272,854 - 22,273,881)(22,398,299 - 22,399,389)
sequence
gaattctttgttcagctctgagtcccattttttaatggggttatttgatt
ttctggagtccaccttcctgagttctttatatatattggatattagtccc
ctatctgatttgggataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttatcaacggtgtcttttgctttgcagaagctctgcaatttta
tgaggtcccatttattgattcttgatcttacagcacaagccattgctctt
ctattcaggaatttttcccctgtaaccatatcaggtatgagaagaaactt
cttcggtttttccatgaaagttccaagaccaggatttcccatctagcatt
tctgacactcacagtcaccagctctatatcatcacttgttccagtccttc
tgtgctcaaggttgttttgacagttggtatgaagcagacaattgtaggag
gactagtttggtcttgggagaaaataccaactggattgatgaggtgacag
aatgacaggcttgcctgtgcaagtgcaatatttgctcattttctgactgc
atttccatcttagcatgacaggaatttctggtgactggaagaatctattc
actttggctcaaagtgaagccattgacagtctacagggggaaaatgttga
gtctggatctgggtcacctcccctggttggaaggttgttgattgaccctc
ttccagtaccagataaagtttgtgtagtcctggctgtcctagaacttgct
ctgtagaggaagctggccttgaactcaacagagtgagtgcctgagctccc
caagtgctggcattaaatgtgtgtacgaccacagcctagctataagttgg
aagactgtaaatctttcaggaactatgagtgttagttacttgtggcttaa
aaataaaacctatctgtacttttttgtctctagaaacaggtttagtaacc
ttgggaacaggaaaactcatggcgaaaaaacatccatcatatgggcctgt
aagcagtctatggtgacattctttta
gaattctaatttacatttgagttcagttggaggagttttgggagcaaaag
ccatcatgttgtttggaaatatagtgaggaatagagtcaaggcattggcc
acagccatgtggcttaaaatcacctgtctgggcctctgtttagaaccagt
caagactggagagaaattatggacaaatagaaagacattggccacggtcc
caaccccaaactggcaaagcaagaggatctgaagagccacttcctcagtg
gttttcacggatttaccatgagcagacatggagaggcctttattcaaccc
tggagtaatgattaggtaggacactactctcctcgggtctctgttttatt
gtccacacttaccaattgatttgagacaatttcttcacttgataagtgag
acactattctatcacattacaggcaaattgcctgaaaaacaatgaatgta
taaaaactcaaataaaattttatactgattttattactcctgcctcaatg
taaattttgtattgcaactacatctttattggtccagtaggtcaagagca
caataacacacattttaacacaccaaggtctttgcatatgaatacagaca
gtaaagagtctactatgagtctgtgattccatcatcagaattcaatacaa
ttaggagggaggagaggcttcaattgggatgtaactaaatcaataaaaaa
taaaagaatatataaatgcaacataaaataattaactgaattttattatg
ttatagtaacatattaaaaatagtatgtatgggaacatataatattgcac
acaataatgaagttgtgtaccgaattcagtggtacgaaattgagttgttg
gcttttgagaaattttatctactcatcctaaaaatttttaaaacacaaat
atttctgataaagccacctgtgttgtatcacaagatgacatagcttacat
gttgtgtcctcatacgaaaaaaaaaaaacacttgctaccaggttcattat
atattttactgatcaaattttgttcttaatgggaggtgcaagtctactgg
cctcactgctgattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_22272854_22273881
seq2: B6Ng01-141O19.b_47_1072

seq1  GAATTCTTTGTTCAGCTCTGAGTCCCATTTTTTAATGGGGTTATTTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTCAGCTCTGAGTCCCATTTTTTAATGGGGTTATTTGATT  50

seq1  TTCTGGAGTCCACCTTCCTGAGTTCTTTATATATATTGGATATTAGTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGAGTCCACCTTCCTGAGTTCTTTATATATATTGGATATTAGTCCC  100

seq1  CTATCTGATTTGGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTGATTTGGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGCCT  150

seq1  TTTTGTCTTATCAACGGTGTCTTTTGCTTTGCAGAAGCTCTGCAATTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCTTATCAACGGTGTCTTTTGCTTTGCAGAAGCTCTGCAATTTTA  200

seq1  TGAGGTCCCATTTATTGATTCTTGATCTTACAGCACAAGCCATTGCTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTCCCATTTATTGATTCTTGATCTTACAGCACAAGCCATTGCTCTT  250

seq1  CTATTCAGGAATTTTTCCCCTGTAACCATATCAGGTATGAGAAGAAACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCAGGAATTTTTCCCCTGTAACCATATCAGGTATGAGAAGAAACTT  300

seq1  CTTCGGTTTTTCCATGAAAGTTCCAAGACCAGGATTTCCCATCTAGCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCGGTTTTTCCATGAAAGTTCCAAGACCAGGATTTCCCATCTAGCATT  350

seq1  TCTGACACTCACAGTCACCAGCTCTATATCATCACTTGTTCCAGTCCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACACTCACAGTCACCAGCTCTATATCATCACTTGTTCCAGTCCTTC  400

seq1  TGTGCTCAAGGTTGTTTTGACAGTTGGTATGAAGCAGACAATTGTAGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTCAAGGTTGTTTTGACAGTTGGTATGAAGCAGACAATTGTAGGAG  450

seq1  GACTAGTTTGGTCTTGGGAGAAAATACCAACTGGATTGATGAGGTGACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGTTTGGTCTTGGGAGAAAATACCAACTGGATTGATGAGGTGACAG  500

seq1  AATGACAGGCTTGCCTGTGCAAGTGCAATATTTGCTCATTTTCTGACTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACAGGCTTGCCTGTGCAAGTGCAATATTTGCTCATTTTCTGACTGC  550

seq1  ATTTCCATCTTAGCATGACAGGAATTTCTGGTGACTGGAAGAATCTATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCATCTTAGCATGACAGGAATTTCTGGTGACTGGAAGAATCTATTC  600

seq1  ACTTTGGCTCAAAGTGAAGCCATTGACAGTCTACAGGGGGAAAATGTTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGGCTCAAAGTGAAGCCATTGACAGTCTACAGGGGGAAAATGTTGA  650

seq1  GTCTGGATCTGGGTCACCTCCCCTGGTTGGAAGGTTGTTGATTGACCCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGATCTGGGTCACCTCCCCTGGTTGGAAGGTTGTTGATTGACCCTC  700

seq1  TTCCAGTACCAGATAAAGTTTGTGTAGTCCTGGCTGTCCTAGAACTTGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGTACCAGATAAAGTTTGTGTAGTCCTGGCTGTCCTAGAACTTGCT  750

seq1  CTGTAGAGGAAGCTGGCCTTGAACTCAACAGAGTGAGTGCCTGAGCTCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGAGGAAGCTGGCCTTGAACTCAACAGAGTGAGTGCCTGAGCTCCC  800

seq1  CAAGTGCTGGCATTAAATGTGTGTACGACCACAGCCTAGCTATAAGTTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGCTGGCATTAAATGTGTGTACGACCACAGCCTAGCTATAAGTTGG  850

seq1  AAGACTGTAAATCTTTCAGGAACTATGAGTGTTAGTTACTTGT-GCTTAA  899
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AAGACTGTAAATCTTTCAGGAACTATGAGTGTTAGTTACTTGTGGCTTAA  900

seq1  AAATAAAACCTATCTGTACTTTTTTGTCATCTAGAGACAAGTTTAAGTAA  949
      |||||||||||||||||||||||||||| |||||| ||| |||| |||||
seq2  AAATAAAACCTATCTGTACTTTTTTGTC-TCTAGAAACAGGTTT-AGTAA  948

seq1  CC-TGGGAACAGGAAAACTCAATGCAGAAAATACATCCATCATATTGGCC  998
      || ||||||||||||||||| |||  ||||| ||||||||||||| ||||
seq2  CCTTGGGAACAGGAAAACTC-ATGGCGAAAAAACATCCATCATATGGGCC  997

seq1  TGTACAGCAGTCTATGGTGACATTCTTTTA  1028
      |||| |||||||||||||||||||||||||
seq2  TGTA-AGCAGTCTATGGTGACATTCTTTTA  1026

seq1: chr7_22398299_22399389
seq2: B6Ng01-141O19.g_69_1133 (reverse)

seq1  GAATCAGCAGATGATGCAGGTAAGACTCTGGCACCTCACATTTTAGAACA  50
      |||||||||| ||| ||  || |||  || ||||||| || || ||||||
seq2  GAATCAGCAG-TGAGGCCAGT-AGA--CTTGCACCTCCCA-TTAAGAACA  45

seq1  AAAATTATGATCAGTAAAATTATTAATA-AATGAAACTTGTTAGCAAGTG  99
      |||  | |||||||||||||     ||| |||| ||| || |||||||||
seq2  AAA--TTTGATCAGTAAAAT-----ATATAATG-AACCTGGTAGCAAGTG  87

seq1  TTTTTTTTTTTTTTCGTATGGAGGACAC-ACATGTAAGCCTATGTTCATC  148
        ||||||||||||||||| |||||||| ||||||||| ||||| |||||
seq2  --TTTTTTTTTTTTCGTAT-GAGGACACAACATGTAAG-CTATG-TCATC  132

seq1  TGTGTGATTACAACACAGGTGGCTTTATCAGAAATATTTGGTGTTTTTAA  198
      | ||||| ||||||||||||||||||||||||||||||| |||||||  |
seq2  T-TGTGA-TACAACACAGGTGGCTTTATCAGAAATATTT-GTGTTTT--A  177

seq1  AAATTTTTTAGGATGAGTAGTATAAAATTTTCTCAAAAGCCAACAACTCA  248
      ||| |||||||||||||||| |||||| ||||||||||||||||||||||
seq2  AAAATTTTTAGGATGAGTAG-ATAAAA-TTTCTCAAAAGCCAACAACTCA  225

seq1  ATTTCGTACCACTGAATTCGGTTACACAACTTCATTATTGTGTGCAATAT  298
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ATTTCGTACCACTGAATTCGG-TACACAACTTCATTATTGTGTGCAATAT  274

seq1  TATATTGTTCCCATACATACTATTTTTAATATGTTACTATAACATAATGA  348
      |||| ||||||||||||||||||||||||||||||||||||||||||| |
seq2  TATA-TGTTCCCATACATACTATTTTTAATATGTTACTATAACATAATAA  323

seq1  AATTCAGTTAATTATTTTTATGTTGCATTTATATATTCTTTTATTTTTTA  398
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AATTCAGTTAATTA-TTTTATGTTGCATTTATATATTCTTTTATTTTTTA  372

seq1  TTGATTTAGTTACATCCCAATTGAAGCCTCTCCTCCCTCCTAATTGTATT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTAGTTACATCCCAATTGAAGCCTCTCCTCCCTCCTAATTGTATT  422

seq1  GAATTCTGATGATGGAATCACAGACTCATAGTAGACTCTTTACTGTCTGT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGATGATGGAATCACAGACTCATAGTAGACTCTTTACTGTCTGT  472

seq1  ATTCATATGCAAAGACCTTGGTGTGTTAAAATGTGTGTTATTGTGCTCTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATATGCAAAGACCTTGGTGTGTTAAAATGTGTGTTATTGTGCTCTT  522

seq1  GACCTACTGGACCAATAAAGATGTAGTTGCAATACAAAATTTACATTGAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTACTGGACCAATAAAGATGTAGTTGCAATACAAAATTTACATTGAG  572

seq1  GCAGGAGTAATAAAATCAGTATAAAATTTTATTTGAGTTTTTATACATTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAGTAATAAAATCAGTATAAAATTTTATTTGAGTTTTTATACATTC  622

seq1  ATTGTTTTTCAGGCAATTTGCCTGTAATGTGATAGAATAGTGTCTCACTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTTTCAGGCAATTTGCCTGTAATGTGATAGAATAGTGTCTCACTT  672

seq1  ATCAAGTGAAGAAATTGTCTCAAATCAATTGGTAAGTGTGGACAATAAAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGTGAAGAAATTGTCTCAAATCAATTGGTAAGTGTGGACAATAAAA  722

seq1  CAGAGACCCGAGGAGAGTAGTGTCCTACCTAATCATTACTCCAGGGTTGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGACCCGAGGAGAGTAGTGTCCTACCTAATCATTACTCCAGGGTTGA  772

seq1  ATAAAGGCCTCTCCATGTCTGCTCATGGTAAATCCGTGAAAACCACTGAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGGCCTCTCCATGTCTGCTCATGGTAAATCCGTGAAAACCACTGAG  822

seq1  GAAGTGGCTCTTCAGATCCTCTTGCTTTGCCAGTTTGGGGTTGGGACCGT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGGCTCTTCAGATCCTCTTGCTTTGCCAGTTTGGGGTTGGGACCGT  872

seq1  GGCCAATGTCTTTCTATTTGTCCATAATTTCTCTCCAGTCTTGACTGGTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAATGTCTTTCTATTTGTCCATAATTTCTCTCCAGTCTTGACTGGTT  922

seq1  CTAAACAGAGGCCCAGACAGGTGATTTTAAGCCACATGGCTGTGGCCAAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACAGAGGCCCAGACAGGTGATTTTAAGCCACATGGCTGTGGCCAAT  972

seq1  GCCTTGACTCTATTCCTCACTATATTTCCAAACAACATGATGGCTTTTGC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGACTCTATTCCTCACTATATTTCCAAACAACATGATGGCTTTTGC  1022

seq1  TCCCAAAACTCCTCCAACTGAACTCAAATGTAAATTAGAATTC  1091
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAAACTCCTCCAACTGAACTCAAATGTAAATTAGAATTC  1065