BAC Information

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BAC

Clone NameB6Ng01-143A16
Chromosome7 (Build37)
Map Location 135,854,206 - 135,855,274
singlet/doubletsinglet
Overlap gene1110007A13Rik
Upstream geneCtf1, Ctf2, Fbxl19, Tmem142c, Setd1a, Hsd3b7, Stx1b2, Stx4a, Zfp668, Zfp646, BC039632, Vkorc1, Bckdk, Myst1, Prss8, Prss36, Fus, Pycard, Trim72, LOC436010, EG668675, Itgam, Itgax, Itgad, Cox6a2, LOC100043133, Armc5, Tgfb1i1, Slc5a2, BC017158, EG628781, Rgs10, LOC100043643, Tial1, Bag3, EG639030, Inpp5f, LOC100043651
Downstream geneSec23ip, LOC210714, LOC100043144, Ppapdc1a, Brwd2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-143A16.bB6Ng01-143A16.g
ACCDH941085DH941086
length1,0481,097
definitionDH941085|Mus musculus domesticus DNA, BAC clone: B6Ng01-143A16, 5' end.DH941086|Mus musculus domesticus DNA, BAC clone: B6Ng01-143A16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaggttagccatggcttgaaacaagaaaatattttgccaacatt
tttgtgttattattgtttcctttttctttttcttccttctctttcttcct
tctctttcttccttcctttccttctttttcctcctcttcttgcccccctc
ccccacccccgacagggtctcaccatacagtcctgactatcctagagttc
actatgtagaatcaggctggccttgaactcacagaggtctgcctgcctat
gcctcctctaagtatgaaaatgattaagttcttgctatgtagaaagccga
tggtcacgtggtatccaataagtctgctgtaggtgtgcttgtaaaaagtc
cttccttccctttggccaaaggaaagatagaacaaggtctatgttatcat
gtcttgttatgtaattaaaaagagtctaaaaacatacaactatactatcc
cttattgaagcaaaagaagggtggtgatgaatatacacgtagctagttag
ctatgtataaatacaggagggacagacagccagagactaggaagctggtt
cccagcagggagagaccaaaagaactgtggaacacacaaaggcattcttg
ggcacttgtgggatagcatagtcctgcttctgaagggatacagtgaaatg
taaccccacaaatgaacctacatgaaacgaataccagaatcaaaaggggc
cacagtggagtgtagcactgaatgcaaagcctcactgtaaaacaacagag
tactggatgctggtgtaacctgcaatcctagcactctgcagcagaggcag
gaggctgacacaagttcaagggccagcctgatgtacggaaaagaaacaaa
gacattgggcacacacagagcttctatgatgaggctctttaactacagga
ggggaaatgagagagagctgtgctgaagagtgtgactcaggctttgtctt
ttttgtgatgtcttctcattcgtagcccagtctggtctacactcagtctt
tctgactcacttcgagtgctgagatatgtgtgtgtactcatgccagga
gaattcaattcccagcaaccacatggagaatcacagccatctgtaatggg
atctgattctggtgtgtctgaagatagctacagtgtactcacatacatta
aatagatagatagatagatagatagatagatagatagatagatagataga
tagatagataatcacctcaggaaaatgagatattctgagaaaagagattc
aagaagcaacctgtgtggccattttactattagacaaaatagtaaaacca
aaactagatagaaaagaatactatattctcaacaaaggaaaaaaatctac
caagaggatattgccattcttaacacaacacaagaacaccaaagctcata
aaaataaatactactatagctaaaagtgcatattgaccctcacacagtaa
tggtgagtggcttcaataccctactctagccaatagacaggtcacccaga
caacagctaaccagaggagctaactgatatcataaaccaagtggacctga
tctatttacaggacatttcacccacacataaaagaaaataccttctcagc
agttcatggaactttctccaaaactgaccacatgcttggatgcaaagcaa
gtctcatcagatacaagaaaattgaaataataccctgcatcctatctgac
tacctcagattaaagctagatatgaacaacagaaatcttacaaactcatg
gaaaaggaataactcactactgaatgaaaaacagacttaaaactttctgg
aactaaataaaaatgaatccacaaatgcccaaatccatgggaacacaatg
aaggctgttataagaggcaagttcatagcagagagagagagagagagaga
gagagagagagagagagagagagagagagagagagagagaagattgattt
tccatttacactttacagctctagacaaaggagaaaccatacccaaagga
atgactcaaaaaatatcaatcagtgaatcataaatgaaaccgcatgtaca
cgtgcgtcaacatacaccatcacccccaactgcagaattatgaagagaga
ttgtctttggagatacgtaattaatgatcagtttagtcagtagtaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_135854206_135855274
seq2: B6Ng01-143A16.b_45_1092

seq1  GAATTCCAGGTTAGCCATGGCTTGAAACAAGAAAATATTTTGCCAACATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGTTAGCCATGGCTTGAAACAAGAAAATATTTTGCCAACATT  50

seq1  TTTGTGTTATTATTGTTTCCTTTTTCTTTTTCTTCCTTCTCTTTCTTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGTTATTATTGTTTCCTTTTTCTTTTTCTTCCTTCTCTTTCTTCCT  100

seq1  TCTCTTTCTTCCTTCCTTTCCTTCTTTTTCCTCCTCTTCTTGCCCCCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTCTTCCTTCCTTTCCTTCTTTTTCCTCCTCTTCTTGCCCCCCTC  150

seq1  CCCCACCCCCGACAGGGTCTCACCATACAGTCCTGACTATCCTAGAGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACCCCCGACAGGGTCTCACCATACAGTCCTGACTATCCTAGAGTTC  200

seq1  ACTATGTAGAATCAGGCTGGCCTTGAACTCACAGAGGTCTGCCTGCCTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGTAGAATCAGGCTGGCCTTGAACTCACAGAGGTCTGCCTGCCTAT  250

seq1  GCCTCCTCTAAGTATGAAAATGATTAAGTTCTTGCTATGTAGAAAGCCGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCTCTAAGTATGAAAATGATTAAGTTCTTGCTATGTAGAAAGCCGA  300

seq1  TGGTCACGTGGTATCCAATAAGTCTGCTGTAGGTGTGCTTGTAAAAAGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCACGTGGTATCCAATAAGTCTGCTGTAGGTGTGCTTGTAAAAAGTC  350

seq1  CTTCCTTCCCTTTGGCCAAAGGAAAGATAGAACAAGGTCTATGTTATCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTCCCTTTGGCCAAAGGAAAGATAGAACAAGGTCTATGTTATCAT  400

seq1  GTCTTGTTATGTAATTAAAAAGAGTCTAAAAACATACAACTATACTATCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGTTATGTAATTAAAAAGAGTCTAAAAACATACAACTATACTATCC  450

seq1  CTTATTGAAGCAAAAGAAGGGTGGTGATGAATATACACGTAGCTAGTTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTGAAGCAAAAGAAGGGTGGTGATGAATATACACGTAGCTAGTTAG  500

seq1  CTATGTATAAATACAGGAGGGACAGACAGCCAGAGACTAGGAAGCTGGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTATAAATACAGGAGGGACAGACAGCCAGAGACTAGGAAGCTGGTT  550

seq1  CCCAGCAGGGAGAGACCAAAAGAACTGTGGAACACACAAAGGCATTCTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCAGGGAGAGACCAAAAGAACTGTGGAACACACAAAGGCATTCTTG  600

seq1  GGCACTTGTGGGATAGCATAGTCCTGCTTCTGAAGGGATACAGTGAAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTTGTGGGATAGCATAGTCCTGCTTCTGAAGGGATACAGTGAAATG  650

seq1  TAACCCCACAAATGAACCTACATGAAACGAATACCAGAATCAAAAGGGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCCCACAAATGAACCTACATGAAACGAATACCAGAATCAAAAGGGGC  700

seq1  CACAGTGGAGTGTAGCACTGAATGCAAAGCCTCACTGTAAAACAACAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTGGAGTGTAGCACTGAATGCAAAGCCTCACTGTAAAACAACAGAG  750

seq1  TACTGGATGCTGGTGTAACCTGCAATCCTAGCACTCTGCAGGCAGAGGCA  800
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TACTGGATGCTGGTGTAACCTGCAATCCTAGCACTCTGCA-GCAGAGGCA  799

seq1  GGAGGCTGACACAAGTTCAA-GGCCAGCCTGATGTACGGAAAAAGAAAAC  849
      |||||||||||||||||||| ||||||||||||||||||||||   ||||
seq2  GGAGGCTGACACAAGTTCAAGGGCCAGCCTGATGTACGGAAAA--GAAAC  847

seq1  AAAGACATTGGGCACACACAGAGCTTCTAATGATGAGGCTCTTTAACTAC  899
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AAAGACATTGGGCACACACAGAGCTTCT-ATGATGAGGCTCTTTAACTAC  896

seq1  AGGAGGGGGAAATGAGAAGGAGAGCTTGTGCTGAAGGAGTGTGAACTCAG  949
      |||| ||||||||||||  |||||| ||||||||| ||||||| ||||| 
seq2  AGGA-GGGGAAATGAGA--GAGAGC-TGTGCTGAA-GAGTGTG-ACTCA-  939

seq1  GGCTTTGTCTTTTTTGTGATGTCTTCCTCCATTTCGTAGCCCAGTCTGGT  999
      ||||||||||||||||||||||||| |||   ||||||||||||||||||
seq2  GGCTTTGTCTTTTTTGTGATGTCTT-CTC--ATTCGTAGCCCAGTCTGGT  986

seq1  CTACAACTCAGTTCTTTCTGACTCAACCTTCGAAGTGCTGAGATTATGTG  1049
      |||| |||||| |||||||||||||  ||||| |||||||||| ||||||
seq2  CTAC-ACTCAG-TCTTTCTGACTCA--CTTCG-AGTGCTGAGA-TATGTG  1030

seq1  TGTGTACATCATGCACAGGA  1069
      ||||||| |||||| |||||
seq2  TGTGTAC-TCATGC-CAGGA  1048