BAC Information

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BAC

Clone NameB6Ng01-143B15
Chromosome7 (Build37)
Map Location 128,137,586 - 128,251,510
singlet/doubletdoublet
Overlap gene4933427G17Rik, EG668548, Mettl9, LOC668456, Igsf6, Otoa
Upstream geneDnahc3, Tmem159, Zp2, Anks4b, Crym, Abca14, Abca15, Abca16, LOC668429, LOC546994, LOC100042914, E130201H02Rik, LOC637957, Uqcrc2, 4930408O21Rik, BC030336, E030013G06Rik, EG436008, LOC100043426, Eef2k, Polr3e, Cdr2
Downstream geneLOC668556, Hs3st2, Usp31, Scnn1g, Scnn1b, Cog7, Gga2, Ears2, Ubfd1, Ndufab1, Palb2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-143B15.bB6Ng01-143B15.g
ACCDH941128DH941129
length1,0941,048
definitionDH941128|Mus musculus domesticus DNA, BAC clone: B6Ng01-143B15, 5' end.DH941129|Mus musculus domesticus DNA, BAC clone: B6Ng01-143B15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,250,390 - 128,251,510)(128,137,586 - 128,138,638)
sequence
gaattcattctcactccaaatcacttgaatgtgtctgctgtccctcacca
tcaaatgtctcccttcctggagcctcacaggatagggtcaatcccttcat
atttgatttaatccagatgacatccattcaagaagtcttccctgatttct
tagttcagagattggccaaccctagcccacgggatgggcccaggtcaccc
agtttctatataatctgaaaaccaagaacagtttttacatgattgaagag
aaattagaaagcactaatgtttggtaaaccatgaatattatattagctca
aataccaatgtccatacagactttactggcatgcaaagccccctcattca
tccatcattcgtgcctgctttcaagattcagtgtctgactacagttttaa
taagctaaaattgttactcatttttggcgtgggtatgtgtgcatgatgta
catgtgtgtatgagtgttcttgtgtgtgtgtggatacgtgcctgtatgca
tgtgcatgtgcatgtaaaggtcagaagccgaatgtgtcttccctgatcac
tctctgtcttatatgttgaggcagtgggttctcacttgaacccaggactc
ataaatttggctagtcaagctaaccagcttcccccaggataccctgtctt
tctctctccctctcttctctgattctctacaatagcatgaagcctaacaa
ccctagagccatgagccttgggccccatggagatacccaactccttgatt
attattattatattctagtccccttatataaatgaactagcatgtgatca
agcagtttgatcctatagaaattaagcactctgaaaaacacaagtgacct
atcaaacctcttagcaacatctctacatcatttgtagtgctaaacacatt
gggaatattttctatagttgtcatatcatatgttcaaggagcaggactag
ggaaagtcctatacaagtcaggcaccaacgatgcacattagtaagtgctc
ctcaacaaccagaaacctggcttaataccaggccaaaatcaacaacacaa
aaccctggctaacctggggctggtgccttatccagcactggagg
gaattcagatgtaaggtctctgatttccaaagcttgcacttcgcactctg
tcccagattccttgcgttactgactgtcctgcatgtgcctgtgttagaga
ttcagacgaggcagcttcacctcagtaagtggatgcaagggacttgctaa
gacaccgcacacgcgagcatcctgggtctcgctggggctggtttccttcc
ctcgaagagaagcttcggatcttgtcagtcactgagctgctattttcagc
ctctagaaaatgagctctcgtttgttccttgaaagtagaagaggaagcca
aagagtgggccaggaaggaaaggatgtttacagtcaacttacagtgttca
aaaattcctcttctattgtatgtacatacatttggttagaggaaacttct
ctgggctaaacaatgcacttttcatgttgcaaacaaagagtgttttcaga
actttgtgaatgcgcatgagtgcacatgtcacagactttttagcctagaa
caatggatgtcttcagaactggcaacaaaaattcaggaaagggaaaaaga
agtaagtccttagtgttaatatgttagaatgattaacatatataacactt
aaccagaagaaatgggatgcaacctagccactgtgtactagacttctgat
tttaggggaaggggcatttcaaatcgcctcacagtgctggtggtgagatg
atcagtaaagacctgccttgggttagtgctggctttaacctccaattgta
aactgtatatttgtttaagtcttggatgagcctctcatttcctgggtagt
ttgatgtgtcttatggaaaatagtaaccatttctttaatattcaaacaac
actagtgcctgcggtttggttttgttttttaatatcttttttctttctcc
cttttgacagtgctgaggtagacccagagcttttatatgtgcttcaacca
cgacctacatcccccaacccttcatttttgggtgttatgaattaccagct
gggtgtagtggctcacctgaatccaagcctttggggagctgaggcagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_128250390_128251510
seq2: B6Ng01-143B15.b_45_1138 (reverse)

seq1  CCTCCAGTGCTGGGATTAAAGGCACATGCCACCATGCTTGGCCAGTGTTT  50
      ||||||||||| ||||  |||||||  ||| ||| | || ||||| ||  
seq2  CCTCCAGTGCT-GGAT--AAGGCACCAGCC-CCA-GGTTAGCCAGGGT--  43

seq1  TTGTTTGTTTGTTTGTTTTTGTGCTCTGGGTATTAAGCCCAGGTTTTCTT  100
         ||||| |  ||| |||||  ||   ||||||||| ||||| ||||| 
seq2  ---TTTGTGTTGTTGATTTTGGCCT---GGTATTAAG-CCAGG-TTTCTG  85

seq1  GTTTGTTTGAGGAGCACTTTACTAATGTGCAATCCGTTGTGTGCACTGAC  150
      |||   ||||||||||| |||||||||||||   ||||| |||| |||| 
seq2  GTT--GTTGAGGAGCAC-TTACTAATGTGCA--TCGTTG-GTGC-CTGA-  127

seq1  CTTGTATAGACTTTTCCCTTGTCCTTGCTCCCTGAACAATATGATATGAC  200
      |||||||||   ||||||| |||| |||||| ||||| ||||||||||||
seq2  CTTGTATAGGACTTTCCCTAGTCC-TGCTCCTTGAAC-ATATGATATGAC  175

seq1  AACTATTAGTAAAATATTCCCATTGTGTTTAGCACTAAAAATGATGTAGA  250
      ||||| ||| |||||||||||| |||||||||||||| ||||||||||||
seq2  AACTA-TAG-AAAATATTCCCAATGTGTTTAGCACTACAAATGATGTAGA  223

seq1  GATGTTGCTAAGAGGTTTGATAGGTCACTTGTG-TTTTCAGAGTGCTTAA  299
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GATGTTGCTAAGAGGTTTGATAGGTCACTTGTGTTTTTCAGAGTGCTTAA  273

seq1  TTTCTATAGGATCAAACTGCTTGATCACATGCTAGTTCATTTATATAAGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATAGGATCAAACTGCTTGATCACATGCTAGTTCATTTATATAAGG  323

seq1  GGACTAGAATAATAATAATAATAATCAAGGAGTTGGGTATCTCCATGGGG  399
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GGACTAGAAT-ATAATAATAATAATCAAGGAGTTGGGTATCTCCATGGGG  372

seq1  CCCAAGGCTCATGGCTCTAGGGTTGTTAGGCTTCATGCTATTGTAGAGAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGGCTCATGGCTCTAGGGTTGTTAGGCTTCATGCTATTGTAGAGAA  422

seq1  TCAGAGAAGAGAGGGAGAGAGAAAGACAGGGTATCCTGGGGGAAGCTGGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGAAGAGAGGGAGAGAGAAAGACAGGGTATCCTGGGGGAAGCTGGT  472

seq1  TAGCTTGACTAGCCAAATTTATGAGTCCTGGGTTCAAGTGAGAACCCACT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTGACTAGCCAAATTTATGAGTCCTGGGTTCAAGTGAGAACCCACT  522

seq1  GCCTCAACATATAAGACAGAGAGTGATCAGGGAAGACACATTCGGCTTCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAACATATAAGACAGAGAGTGATCAGGGAAGACACATTCGGCTTCT  572

seq1  GACCTTTACATGCACATGCACATGCATACAGGCACGTATCCACACACACA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTTACATGCACATGCACATGCATACAGGCACGTATCCACACACACA  622

seq1  CAAGAACACTCATACACACATGTACATCATGCACACATACCCACGCCAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAACACTCATACACACATGTACATCATGCACACATACCCACGCCAAA  672

seq1  AATGAGTAACAATTTTAGCTTATTAAAACTGTAGTCAGACACTGAATCTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGTAACAATTTTAGCTTATTAAAACTGTAGTCAGACACTGAATCTT  722

seq1  GAAAGCAGGCACGAATGATGGATGAATGAGGGGGCTTTGCATGCCAGTAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCAGGCACGAATGATGGATGAATGAGGGGGCTTTGCATGCCAGTAA  772

seq1  AGTCTGTATGGACATTGGTATTTGAGCTAATATAATATTCATGGTTTACC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGTATGGACATTGGTATTTGAGCTAATATAATATTCATGGTTTACC  822

seq1  AAACATTAGTGCTTTCTAATTTCTCTTCAATCATGTAAAAACTGTTCTTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTAGTGCTTTCTAATTTCTCTTCAATCATGTAAAAACTGTTCTTG  872

seq1  GTTTTCAGATTATATAGAAACTGGGTGACCTGGGCCCATCCCGTGGGCTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCAGATTATATAGAAACTGGGTGACCTGGGCCCATCCCGTGGGCTA  922

seq1  GGGTTGGCCAATCTCTGAACTAAGAAATCAGGGAAGACTTCTTGAATGGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGGCCAATCTCTGAACTAAGAAATCAGGGAAGACTTCTTGAATGGA  972

seq1  TGTCATCTGGATTAAATCAAATATGAAGGGATTGACCCTATCCTGTGAGG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATCTGGATTAAATCAAATATGAAGGGATTGACCCTATCCTGTGAGG  1022

seq1  CTCCAGGAAGGGAGACATTTGATGGTGAGGGACAGCAGACACATTCAAGT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGGAAGGGAGACATTTGATGGTGAGGGACAGCAGACACATTCAAGT  1072

seq1  GATTTGGAGTGAGAATGAATTC  1121
      ||||||||||||||||||||||
seq2  GATTTGGAGTGAGAATGAATTC  1094

seq1: chr7_128137586_128138638
seq2: B6Ng01-143B15.g_71_1118

seq1  GAATTCAGATGTAAGGTCTCTGATTTCCAAAGCTTGCACTTCGCACTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGATGTAAGGTCTCTGATTTCCAAAGCTTGCACTTCGCACTCTG  50

seq1  TCCCAGATTCCTTGCGTTACTGACTGTCCTGCATGTGCCTGTGTTAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGATTCCTTGCGTTACTGACTGTCCTGCATGTGCCTGTGTTAGAGA  100

seq1  TTCAGACGAGGCAGCTTCACCTCAGTAAGTGGATGCAAGGGACTTGCTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGACGAGGCAGCTTCACCTCAGTAAGTGGATGCAAGGGACTTGCTAA  150

seq1  GACACCGCACACGCGAGCATCCTGGGTCTCGCTGGGGCTGGTTTCCTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCGCACACGCGAGCATCCTGGGTCTCGCTGGGGCTGGTTTCCTTCC  200

seq1  CTCGAAGAGAAGCTTCGGATCTTGTCAGTCACTGAGCTGCTATTTTCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGAAGAGAAGCTTCGGATCTTGTCAGTCACTGAGCTGCTATTTTCAGC  250

seq1  CTCTAGAAAATGAGCTCTCGTTTGTTCCTTGAAAGTAGAAGAGGAAGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGAAAATGAGCTCTCGTTTGTTCCTTGAAAGTAGAAGAGGAAGCCA  300

seq1  AAGAGTGGGCCAGGAAGGAAAGGATGTTTACAGTCAACTTACAGTGTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTGGGCCAGGAAGGAAAGGATGTTTACAGTCAACTTACAGTGTTCA  350

seq1  AAAATTCCTCTTCTATTGTATGTACATACATTTGGTTAGAGGAAACTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCCTCTTCTATTGTATGTACATACATTTGGTTAGAGGAAACTTCT  400

seq1  CTGGGCTAAACAATGCACTTTTCATGTTGCAAACAAAGAGTGTTTTCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCTAAACAATGCACTTTTCATGTTGCAAACAAAGAGTGTTTTCAGA  450

seq1  ACTTTGTGAATGCGCATGAGTGCACATGTCACAGACTTTTTAGCCTAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGTGAATGCGCATGAGTGCACATGTCACAGACTTTTTAGCCTAGAA  500

seq1  CAATGGATGTCTTCAGAACTGGCAACAAAAATTCAGGAAAGGGAAAAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGATGTCTTCAGAACTGGCAACAAAAATTCAGGAAAGGGAAAAAGA  550

seq1  AGTAAGTCCTTAGTGTTAATATGTTAGAATGATTAACATATATAACACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGTCCTTAGTGTTAATATGTTAGAATGATTAACATATATAACACTT  600

seq1  AACCAGAAGAAATGGGATGCAACCTAGCCACTGTGTACTAGACTTCTGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGAAGAAATGGGATGCAACCTAGCCACTGTGTACTAGACTTCTGAT  650

seq1  TTTAGGGGAAGGGGCATTTCAAATCGCCTCACAGTGCTGGTGGTGAGATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGGGAAGGGGCATTTCAAATCGCCTCACAGTGCTGGTGGTGAGATG  700

seq1  ATCAGTAAAGACCTGCCTTGGGTTAGTGCTGGCTTTAACCTCCAATTGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTAAAGACCTGCCTTGGGTTAGTGCTGGCTTTAACCTCCAATTGTA  750

seq1  AACTGTATATTTGTTTAAGTCTTGGATGAGCCTCTCATTTCCTGGGTAG-  799
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AACTGTATATTTGTTTAAGTCTTGGATGAGCCTCTCATTTCCTGGGTAGT  800

seq1  TTGATGTGTCTTATGG-AAATAGTAACCATTTCTTTAATATTCAAACAAC  848
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTGATGTGTCTTATGGAAAATAGTAACCATTTCTTTAATATTCAAACAAC  850

seq1  ACTAGTGCCTGCAGTTTTGTTTTGTTTTTTATATTCTTTTTTCTTTTCTT  898
      |||||||||||| |||| |||||||||||||   ||||||||| ||||| 
seq2  ACTAGTGCCTGCGGTTTGGTTTTGTTTTTTAATATCTTTTTTC-TTTCT-  898

seq1  CCCTTTTTGACAGTGCTGAGGTAGAACCCAGAGC-TTTATATGTGCTTCC  947
       || |||||||||||||||||||| ||||||||| ||||||||||||| |
seq2  -CCCTTTTGACAGTGCTGAGGTAG-ACCCAGAGCTTTTATATGTGCTT-C  945

seq1  AACCACCGACCTACATCCCCCAACCCTTCCATTTTTGGTGTATATGAATT  997
      ||||| |||||||||||||||||||||||  |||| ||||| ||||||||
seq2  AACCA-CGACCTACATCCCCCAACCCTTCATTTTTGGGTGT-TATGAATT  993

seq1  AACAGCTGGGTGTAGTGGCTCACCTGTAATCCCAGCATTTGGGAGGCTGA  1047
      | |||||||||||||||||||||||| ||||| ||| ||||||  |||||
seq2  ACCAGCTGGGTGTAGTGGCTCACCTG-AATCCAAGCCTTTGGGGAGCTGA  1042

seq1  GGCAGG  1053
      ||||||
seq2  GGCAGG  1048