BAC Information

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BAC

Clone NameB6Ng01-143N04
Chromosome7 (Build37)
Map Location 52,112,352 - 52,112,565
singlet/doubletsinglet
Overlap genePnkp
Upstream geneKlk4, Klk2-ps, Klk15, Klk1b7-ps, Klk1b8, Klk1b1, Klk1b9, Klk1b10-ps, Klk1b11, LOC100039713, Klk1b26, Klk1b18-ps, Klk1b27, Klk1b14-ps, Klk1b15-ps, Klk1b21, Klk1b22, Klk1b16, Klk1b24, Klk1b3, Klk1b4, Klk1b5, Klk1, 1700028J19Rik, LOC668661, Acpt, LOC628854, EG638453, Clec11a, Shank1, 1700008O03Rik, Syt3, Lrrc4b, 0610012D14Rik, Josd2, 2310044H10Rik, 1700021P22Rik, Mybpc2, Spib, Pold1, Nr1h2, Napsa, Kcnc3, Myh14, 1700023D19Rik, Zfp473, Vrk3, EG628904, Atf5, Nup62, Il4i1, Tbc1d17, Akt1s1
Downstream genePtov1, Med25, Fuz, Ap2a1, Stk22s1, Cpt1c, Prmt1, Bcl2l12, Irf3, AI480556, Rras, Prr12, Prrg2, Nosip, Rcn3, Fcgrt, Rps11, Rnu35b, Rpl13a, Rnu35a, Rnu34, Rnu33, Rnu32, Flt3l, Aldh16a1, Pih1d1, Slc17a7, Gm581, LOC100039953, Tifp39, BC050196, Dkkl1, Tead2, Cd37, Slc6a16, 1700039E15Rik, Trpm4, LOC100040970, Hrc, 2410127E16Rik, Mtag2, Lin7b, Snrp70, Kcna7, Ntf5, LOC100040019, Lhb, Ruvbl2, Gys1, Ftl1, Bax, Dhdh, Nucb1, Tulp2, Myd116, Plekha4, Hsd17b14, Bcat2, Fgf21, Fut1, Izumo1, Rasip1, 5430432N15Rik, Fut2, Sec1, Gm484, Car11, Dbp, Sphk2, Rpl18, 4930403C10Rik, Spaca4, Sult2b1, EG545963, Lmtk3, Pscd2, Kcnj14, Grwd1, Grin2d
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-143N04.bB6Ng01-143N04.g
ACCDH941659DH941660
length83214
definitionDH941659|Mus musculus domesticus DNA, BAC clone: B6Ng01-143N04, 5' end.DH941660|Mus musculus domesticus DNA, BAC clone: B6Ng01-143N04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tgggaacttctcagagagtctgtaaatactagggcctcaactgggtaccg
tgagagttgtttggtgggggtgggggatggcgc
attccaaagctcatctatgctatgggaaagactgttcgaaaatttggctc
ctcccacggcgcatgcgcagtcctgactcgcttgaggcgctctgagccag
agcggataggggtcactcgcatccatagtcacttgatccctacgctagag
ttacttgtttttgttttgattttcttgtatgtatgtatgtatgtatgtat
gtatgtatgtatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_52112352_52112565
seq2: B6Ng01-143N04.g_75_288 (reverse)

seq1  ACATACATACATACATACATACATACATACATACATACAAGAAAATCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACATACATACATACATACATACATACATACATACAAGAAAATCAAA  50

seq1  ACAAAAACAAGTAACTCTAGCGTAGGGATCAAGTGACTATGGATGCGAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAACAAGTAACTCTAGCGTAGGGATCAAGTGACTATGGATGCGAGT  100

seq1  GACCCCTATCCGCTCTGGCTCAGAGCGCCTCAAGCGAGTCAGGACTGCGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCCTATCCGCTCTGGCTCAGAGCGCCTCAAGCGAGTCAGGACTGCGC  150

seq1  ATGCGCCGTGGGAGGAGCCAAATTTTCGAACAGTCTTTCCCATAGCATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCGCCGTGGGAGGAGCCAAATTTTCGAACAGTCTTTCCCATAGCATAG  200

seq1  ATGAGCTTTGGAAT  214
      ||||||||||||||
seq2  ATGAGCTTTGGAAT  214