BAC Information

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BAC

Clone NameB6Ng01-145B06
Chromosome7 (Build37)
Map Location 51,454,142 - 51,455,235
singlet/doubletsinglet
Overlap geneKlk1b3
Upstream geneZfp715, Siglecf, Siglecg, LOC100039610, Lim2, Nkg7, Cldnd2, Etfb, 2210412E05Rik, A230106M20Rik, 4931406B18Rik, LOC668630, LOC100039946, Cd33, BC043301, Zfp719, 4933405K07Rik, Ceacam18, Siglece, Atpbd3, Klk14, Klk13, Klk12, Klk11, Klk10, Klk9, Klk8, Klk7, Klk6, Klk5, Klk4, Klk2-ps, Klk15, Klk1b7-ps, Klk1b8, Klk1b1, Klk1b9, Klk1b10-ps, Klk1b11, LOC100039713, Klk1b26, Klk1b18-ps, Klk1b27, Klk1b14-ps, Klk1b15-ps, Klk1b21, Klk1b22, Klk1b16, Klk1b24
Downstream geneKlk1b4, Klk1b5, Klk1, 1700028J19Rik, LOC668661, Acpt, LOC628854, EG638453, Clec11a, Shank1, 1700008O03Rik, Syt3, Lrrc4b, 0610012D14Rik, Josd2, 2310044H10Rik, 1700021P22Rik, Mybpc2, Spib, Pold1, Nr1h2, Napsa, Kcnc3, Myh14, 1700023D19Rik, Zfp473, Vrk3, EG628904, Atf5, Nup62, Il4i1, Tbc1d17, Akt1s1, Pnkp, Ptov1, Med25, Fuz, Ap2a1, Stk22s1, Cpt1c, Prmt1, Bcl2l12, Irf3, AI480556, Rras, Prr12, Prrg2, Nosip, Rcn3, Fcgrt, Rps11, Rnu35b, Rpl13a, Rnu35a, Rnu34, Rnu33, Rnu32, Flt3l, Aldh16a1, Pih1d1, Slc17a7, Gm581, LOC100039953, Tifp39, BC050196
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145B06.bB6Ng01-145B06.g
ACCDH942584DH942585
length1,0701,077
definitionDH942584|Mus musculus domesticus DNA, BAC clone: B6Ng01-145B06, 5' end.DH942585|Mus musculus domesticus DNA, BAC clone: B6Ng01-145B06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctggaaagggtgaggtctcaggaaacgatttcaatgaataaatga
atccaggaaagggagcttggggttgatttgggctttcttggattgggtat
gaagtggccagttgggatgggagagaatgaaggtttatagatcaaagggg
cagggttaaggctagggtgtctgctcctgttcatgtctgtggtggagatg
acatctaagaggggtggggctccctaataaaggagtttgagatgggacga
gcagtgagaattggaatttctgagggtctgtgacagacaggctctgcttc
ctgtggaggtggacaaatgatatgggtattggagatgctcagggttctct
tagaggcagcctctggacaggagtggaaacttaattagatcacatcagac
cactgtgaggcagagaggaggacccagctgatatgaggtactagggttag
gcattggggtatttggggagtcctgcacagagttagaactagagctgtgc
agtggggctccgatgagaggagagaggagcctgctgcgcaggaagggagg
catgagggggaagagcaggccaaggcacagcatttggaaacagaggaaat
cttggcaagccatgcatagccacacttctctgtaacctcagtacacagca
ggctgaggcagagggattgccatttgactgaagtcaagcctgggatacat
catgagacactaactcagaactttattctcaagagctgggcaggagatgg
ctttgttgctacagattggccatgtagcgttagaacctgtgctgaagcct
ccagaacccaggaaaaagtcaggtgtgatgctgtgtgcctttcacccaaa
ctggggaagtggaaacaggaggatttacctgaggcttgctgcaagtcatc
atagctaacaggactccatacagtgaagacgcagccctagtggtgagtgt
taatgatcctttgatttccctttggcgtctaccctctgattcttctctaa
actgacttatctaaagcatttggtaggtctacacttttccccacggtcaa
gggaacccctctttatcaca
gaattctcttacttgccttggtgtagttggggtgggggtctgagttacaa
tcttttttctggctttctttagccactgcttcccgtctcgaagggtgtat
cccaaacaagtaacttcagtctgacacagctgagcctttttagctgaggc
tcagtcttctgttgcccaggtttcctgtctagatcctgtcttttctttct
ctcctaccactgtggccaagattctagtcaaatttctttcttgtctatga
tccctcctgctttctctttcttctgcctcccacctctgtctctctcacac
acacactttctctgcctctttcactagattgcgtaattgtctccctcttg
taatacaccttctaatctctgaagtttctttctgatatcgggagccaact
gccttatgaaggccagggccactgagccttctgggcttccgaggtaagat
caaagggagtgaaccgcctgaaggctttcatatgcctttcaaggaacact
gagggaggttcgatcgacccctgcattacctcttaccttagccaaattag
tgggcccgtcttgaggcaccttggagaccagaacctggagatagattttt
ttaagctctcgctaccttcggccatgttgcagtcacaactggggttagtc
aaaaggaatcccatgtcaatctcattttgtagctgtgtagaccgcccgtt
ggctctcgggctatttttctagcctcttacagaattctctctcgctcttc
agttgtgaagagcatctgcaacagctgttgacaatcatttcaagtaggct
gatgagagtacataaggaactccaccaaccctgtgaggcattggggatcc
tctgagaaagggggtggttagttttcagttataaatacctgcagaggaaa
atgaccagtactaagggattgaagtttgggcggtcccgagtccacccgga
ctctgcactcttgcagcttcatgtactgcagcggtcctcctcctaccccc
tgagggtcagggttcccatcacagggaatgaggcgtgggacaagggaatg
gtgtggacaagggtactccgggcaagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_51454142_51455235
seq2: B6Ng01-145B06.b_45_1114 (reverse)

seq1  TGTGACAAAAGATGGGTTCCCTTTGTCCTGTGGGGAAAATGTGTATGAAC  50
      |||||  ||||| |||||||| ||| || |||||||||| |||||   ||
seq2  TGTGA-TAAAGAGGGGTTCCC-TTGACC-GTGGGGAAAA-GTGTA--GAC  44

seq1  CTTTCCAATGGCTTTTTGGGTTAGTCTGGTTTTGGAGAAGGAGTCAGGTG  100
      ||  | ||||    ||| | | |||| |  ||| ||||| || ||||  |
seq2  CTACCAAATG---CTTTAGATAAGTCAG--TTTAGAGAA-GAATCAGAGG  88

seq1  GTAGACGCCAGAAGTGGACATCAAGTGATCATCAATCACTCACCACCTAG  150
      |||||||||| ||| ||| |||||  |||||| || ||||||||| ||||
seq2  GTAGACGCCA-AAG-GGAAATCAAAGGATCATTAA-CACTCACCA-CTAG  134

seq1  GGCTGCGTCTCTCACTGTATGGAGTTCCTGTTAGGCTATGATGACTATGC  200
      |||||||||| ||||||||||||| |||||||| |||||||||||| |||
seq2  GGCTGCGTCT-TCACTGTATGGAG-TCCTGTTA-GCTATGATGACT-TGC  180

seq1  AGCAAGCCTCAGGTGAAATCCTCCTGTTTCCACTTCCCCAGCTCTGGGGT  250
      |||||||||||||| ||||||||||||||||||||||||||   | ||||
seq2  AGCAAGCCTCAGGT-AAATCCTCCTGTTTCCACTTCCCCAG--TTTGGGT  227

seq1  TAAAGGCACACAGCATCACACCTGACTTTTTCCCTGGGTTCTGGAAGCTT  300
       |||||||||||||||||||||||||||||| ||||||||||||| ||||
seq2  GAAAGGCACACAGCATCACACCTGACTTTTT-CCTGGGTTCTGGAGGCTT  276

seq1  CAGCACAGGTTCTAACGCTTACATGGCCAATCTTGTAGCAACAAAGCCAT  350
      |||||||||||||||||| ||||||||||||| |||||||||||||||||
seq2  CAGCACAGGTTCTAACGC-TACATGGCCAATC-TGTAGCAACAAAGCCAT  324

seq1  CTCCTGCCCAGCTCTTGAGAAT-AAGTTCTGAGTTAGTGTCTCATGATGT  399
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CTCCTGCCCAGCTCTTGAGAATAAAGTTCTGAGTTAGTGTCTCATGATGT  374

seq1  ATCCCAGGCTTGACTTCAGTC-AATGGCAATCCCTCTGCCTCAGCCTGCT  448
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ATCCCAGGCTTGACTTCAGTCAAATGGCAATCCCTCTGCCTCAGCCTGCT  424

seq1  GTGTACTGAGGTTACAGAGAAGTGTGGCTATGCATGGCTTGCCAAGATTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTACTGAGGTTACAGAGAAGTGTGGCTATGCATGGCTTGCCAAGATTT  474

seq1  CCTCTGTTTCCAAATGCTGTGCCTTGGCCTGCTCTTCCCCCTCATGCCTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGTTTCCAAATGCTGTGCCTTGGCCTGCTCTTCCCCCTCATGCCTC  524

seq1  CCTTCCTGCGCAGCAGGCTCCTCTCTCCTCTCATCGGAGCCCCACTGCAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTGCGCAGCAGGCTCCTCTCTCCTCTCATCGGAGCCCCACTGCAC  574

seq1  AGCTCTAGTTCTAACTCTGTGCAGGACTCCCCAAATACCCCAATGCCTAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTAGTTCTAACTCTGTGCAGGACTCCCCAAATACCCCAATGCCTAA  624

seq1  CCCTAGTACCTCATATCAGCTGGGTCCTCCTCTCTGCCTCACAGTGGTCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAGTACCTCATATCAGCTGGGTCCTCCTCTCTGCCTCACAGTGGTCT  674

seq1  GATGTGATCTAATTAAGTTTCCACTCCTGTCCAGAGGCTGCCTCTAAGAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGATCTAATTAAGTTTCCACTCCTGTCCAGAGGCTGCCTCTAAGAG  724

seq1  AACCCTGAGCATCTCCAATACCCATATCATTTGTCCACCTCCACAGGAAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTGAGCATCTCCAATACCCATATCATTTGTCCACCTCCACAGGAAG  774

seq1  CAGAGCCTGTCTGTCACAGACCCTCAGAAATTCCAATTCTCACTGCTCGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCCTGTCTGTCACAGACCCTCAGAAATTCCAATTCTCACTGCTCGT  824

seq1  CCCATCTCAAACTCCTTTATTAGGGAGCCCCACCCCTCTTAGATGTCATC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCTCAAACTCCTTTATTAGGGAGCCCCACCCCTCTTAGATGTCATC  874

seq1  TCCACCACAGACATGAACAGGAGCAGACACCCTAGCCTTAACCCTGCCCC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCACAGACATGAACAGGAGCAGACACCCTAGCCTTAACCCTGCCCC  924

seq1  TTTGATCTATAAACCTTCATTCTCTCCCATCCCAACTGGCCACTTCATAC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATCTATAAACCTTCATTCTCTCCCATCCCAACTGGCCACTTCATAC  974

seq1  CCAATCCAAGAAAGCCCAAATCAACCCCAAGCTCCCTTTCCTGGATTCAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATCCAAGAAAGCCCAAATCAACCCCAAGCTCCCTTTCCTGGATTCAT  1024

seq1  TTATTCATTGAAATCGTTTCCTGAGACCTCACCCTTTCCAGAATTC  1094
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCATTGAAATCGTTTCCTGAGACCTCACCCTTTCCAGAATTC  1070