BAC Information

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BAC

Clone NameB6Ng01-145N15
Chromosome7 (Build37)
Map Location 150,301,051 - 150,438,927
singlet/doubletdoublet
Overlap geneKcnq1
Upstream geneLOC100039728, EG668763, LOC100043616, EG665295, LOC100043617, Krtap5-2, LOC100039757, LOC100039767, EG665305, Krtap5-5, EG640223, LOC672428, LOC100039800, LOC100043627, LOC100043629, ENSMUSG00000038442, Krtap5-1, Krtap5-4, LOC270015, 6330512M04Rik, Ctsd, Syt8, Tnni2, Lsp1, ENSMUSG00000043795, Tnnt3, Mrpl23, Nctc1, H19, Igf2, Igf2as, Ins2, EG640264, EG624121, Th, Ascl2, Tspan32, R74862, Cd81, Tssc4, Trpm5
Downstream geneCdkn1c, Slc22a18, Phlda2, Nap1l4, Cars, Tnfrsf26, Tnfrsf22, Tnfrsf23, Osbpl5, Mrgprg, Mrgpre, Nadsyn1, Dhcr7, Gm498
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145N15.bB6Ng01-145N15.g
ACCDH943144DH943145
length1,1121,121
definitionDH943144|Mus musculus domesticus DNA, BAC clone: B6Ng01-145N15, 5' end.DH943145|Mus musculus domesticus DNA, BAC clone: B6Ng01-145N15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(150,301,051 - 150,301,854)(150,437,794 - 150,438,927)
sequence
gaattctttgccttgtatttttggtagtttgatgataatgttccttgtaa
agtatctttaatttttttttactttatgtgtatggatatattttgccagc
atgtgtgtttgtgtataacatgtgtgcagtgcctgcagagtccagaagag
ggtgctagatccatagaactgatgcacattctgatgtggatactggaaat
caaacccaggctctctagaagagcaggcagtgctttcaaccactaaacag
tctgtccatccctgtagtgcttttggttgtatctataggggtccttagag
cttccttcactggcttaaatgtctgtatttcacccaaaaattgtgaggtt
tttcagtaattactttgtaaacaattttatttctgcttcttcctgtctct
ccttatcctgaaacatccacaatgtatctgtttactcactttctgctctc
ctataggtcttgaagttttcctttccttttgcatatctttggtctgactt
tcctttttgttagacttgtattcaggctcagaaactcttctgtctgatct
gttctgcatcaagactcctaattgtatactttacttcatatatcttgctc
tttcagtccagatcccctaccccaatctggccttctgctaaatttctcat
tcatatcacaaaacaaaaatttcctaatttctttatattatcttgctata
atctgttttatcatattaagtttcttttaaaaaacactagtttgaattct
ttgtcacgcaggctatcttttttctcttctttgggatgtactgctagaga
attactagttcctttgggctccttcgatttgcccagaggactttacgatg
tagtgttctccagcaaggagatgctctgctctcaacctcaggtgtaccat
gttcccacaggcaccctctctctgcctggcctctatcataagccccaagg
aagcactgctgatggctgtcctttcccatactagtgctaccttataatct
ggccacctcaatctataagagagacctttaggttgtcctctatgctctgc
tgtgatgccttctctgtaccctccttaactatgttctggcaatcgaaaac
cctctcagagta
gaattcattggctatttccaaagggggctttgtggctggatcacaacttc
agaaacatagttgcacttataaagatggcttgtactttggttgggagcat
tgagagcctagcctgagcctgtggcagaaatcatttggaaaaagtctggc
atctttcttctggtacatgtaaaatagtggacatcttacatttattggaa
agtgagtgtttaaggacacagatgaatatagctatgcatgtatctatagg
cagagagagggaaagagcacaaaaaggacagggtagaaggaggagagaaa
gcatcaccagactagctctagctgtgtctggaacagccaggttcagattc
ataaactagaaaaatgtctcattgtccttatctagattgaaatgggctct
gcagtctgttaccaagagcacttaggaatataaaaagctaggggtaagat
atgaacctgaggagataggtctgggggtaagtctaggttgcaaaacacag
caaacaaaacaacaacaaacaccctaagacagtcttgttaagctttgcag
agtagaagacaggaaagaagaaggttagctagataaatctggcccgaggc
cccagcttcagctctacatgggccaggaaactctgggaaaggtgcttcgt
acagctgtccactgactttctactgttataatgcaaacttctctttagag
agcttctctctctaccctgtgtttgcagcactttatggaacatgctgtat
tttgtgttcaagcaaagactgaggatacatttaacttgagatggacagtg
acatgacagttgaagatgacctatggaatcccaagaaatcctaggaacaa
tgctaggctttgtgcaactacagagttcatagtgctggagacttttcact
gaatgccttttctcataatggagatacagcctaacacataaatctcagag
taatggaaatgatctgtggtccaggttggggtctgaatggtaagtgctag
aggacagcatgacagagctagccttagccagcccaggagcgagcatggat
tagcacagctgctgcgacaaaactaggtcatatccagtcttccaatgcgt
gcaggagtcactgtctaggtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_150301051_150301854
seq2: B6Ng01-145N15.b_371_1161

seq1  TCTGTATTTCACCCAAAAATTGTGAGGTTTTTCAGTAATTACTTTGTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTATTTCACCCAAAAATTGTGAGGTTTTTCAGTAATTACTTTGTAAA  50

seq1  CAATTTTATTTCTGCTTCTTCCTGTCTCTCCTTATCCTGAAACATCCACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTTATTTCTGCTTCTTCCTGTCTCTCCTTATCCTGAAACATCCACA  100

seq1  ATGTATCTGTTTACTCACTTTCTGCTCTCCTATAGGTCTTGAAGTTTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATCTGTTTACTCACTTTCTGCTCTCCTATAGGTCTTGAAGTTTTCC  150

seq1  TTTCCTTTTGCATATCTTTGGTCTGACTTTCCTTTTTGTTAGACTTGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTTTGCATATCTTTGGTCTGACTTTCCTTTTTGTTAGACTTGTAT  200

seq1  TCAGGCTCAGAAACTCTTCTGTCTGATCTGTTCTGCATCAAGACTCCTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCTCAGAAACTCTTCTGTCTGATCTGTTCTGCATCAAGACTCCTAA  250

seq1  TTGTATACTTTACTTCATATATCTTGCTCTTTCAGTCCAGATCCCCTACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATACTTTACTTCATATATCTTGCTCTTTCAGTCCAGATCCCCTACC  300

seq1  CCAATCTGGCCTTCTGCTAAATTTCTCATTCATATCACAAAACAAAAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATCTGGCCTTCTGCTAAATTTCTCATTCATATCACAAAACAAAAATT  350

seq1  TCCTAATTTCTTTATATTATCTTGCTATAATCTGTTTTATCATATTAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAATTTCTTTATATTATCTTGCTATAATCTGTTTTATCATATTAAGT  400

seq1  TTCTTTTAAAAAACACTAGTTTGAATTCTTTGTCAGGCAGGCTATCTTTT  450
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TTCTTTTAAAAAACACTAGTTTGAATTCTTTGTCACGCAGGCTATCTTTT  450

seq1  TTCTCTTCTTTGGGATGTACTGCTAGAGAATTACTAGTTCCTTTGGGCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTCTTTGGGATGTACTGCTAGAGAATTACTAGTTCCTTTGGGCTC  500

seq1  CTTCGATTTGCCCAGAGGACTTTACGATGTAGTGTTCTCCAGCAAGGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCGATTTGCCCAGAGGACTTTACGATGTAGTGTTCTCCAGCAAGGAGA  550

seq1  TGCTCTGCTCTCAACCTCAGGTGTACCATGTTCCCACAGGCACCCTCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTGCTCTCAACCTCAGGTGTACCATGTTCCCACAGGCACCCTCTCT  600

seq1  CTGCCTGGCCTCTATCCATAAGCCCCAAGGAAGCACTGCTGATGGCTGTT  650
      ||||||||||||||| |||||||||||||||||||||||||||||||| |
seq2  CTGCCTGGCCTCTAT-CATAAGCCCCAAGGAAGCACTGCTGATGGCTG-T  648

seq1  CCTTTCCCAATACTAGGTGCTACCTTAT-ATCTGGCCACCTC-ATCTATA  698
      |||||||| |||||| |||||||||||| ||||||||||||| |||||||
seq2  CCTTTCCC-ATACTA-GTGCTACCTTATAATCTGGCCACCTCAATCTATA  696

seq1  AGGAGAGACCTTTAGGTTTGTCCTCTATGCTTCTTGCTGGTGGATGCCTT  748
      | |||||||||||||| ||||||||||||||   |||||   |||||| |
seq2  A-GAGAGACCTTTAGG-TTGTCCTCTATGCT--CTGCTG--TGATGCC-T  739

seq1  TCTCTGTACCCTCTTTAAACTATGTTCTTGGGCAAATCGAAAAACCACTC  798
      ||||||||||||| || |||||||||||  ||| ||||||||| || |||
seq2  TCTCTGTACCCTCCTT-AACTATGTTCT--GGC-AATCGAAAACCCTCTC  785

seq1  AGAGTA  804
      ||||||
seq2  AGAGTA  791

seq1: chr7_150437794_150438927
seq2: B6Ng01-145N15.g_69_1189 (reverse)

seq1  GACCTGGACAGTGACTTCTTGCA-GCA-TGGAAAGCTGGGTA-GA-CTAG  46
      ||||| ||||||||| || |||| ||| |||||  |||| || || ||||
seq2  GACCTAGACAGTGAC-TCCTGCACGCATTGGAAGACTGGATATGACCTAG  49

seq1  TTTTGTTCTGCAGGCAGCTGTGCTACT-CATGCTCTGCTTCCTGGGCTTG  95
      ||||||   ||| |||||||||||| | ||||||| || ||||||||| |
seq2  TTTTGT--CGCA-GCAGCTGTGCTAATCCATGCTC-GC-TCCTGGGCTGG  94

seq1  CTTAGGGCTAGCTCTGTCATTGCCTGTCCTCTTTAGCACCTTACCATTCA  145
      | || |||||||||||||||   ||||||||  ||||| |||||||||||
seq2  C-TAAGGCTAGCTCTGTCAT--GCTGTCCTC--TAGCA-CTTACCATTCA  138

seq1  GACCCCACCCTTGGGCCCACAGAATCATTTCCATTTACTCTGAGATTTAT  195
      ||||||| |||  || |||||| |||||||||| ||||||||||||||||
seq2  GACCCCAACCT--GGACCACAG-ATCATTTCCA-TTACTCTGAGATTTAT  184

seq1  GTGTTAGGCCTGTTATCTCCATTATGAGAAAAGGCATTCAGTGAAAAGTC  245
      |||||||| ||| |||||||||||||||||||||||||||||||||||||
seq2  GTGTTAGG-CTG-TATCTCCATTATGAGAAAAGGCATTCAGTGAAAAGTC  232

seq1  TCCAGCACTATGAACTCTGTAGTTGCACAAAGCCTAGCATTGTTCCTAGG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCACTATGAACTCTGTAGTTGCACAAAGCCTAGCATTGTTCCTAGG  282

seq1  ATTTCTTGGGATTCCATAGGTCATCTTCAACTGTCATGTCACTGTCCATC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTGGGATTCCATAGGTCATCTTCAACTGTCATGTCACTGTCCATC  332

seq1  TCAAGTTAAATGTATCCTCAGTCTTTGCTTGAACACAAAATACAGCATGT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTTAAATGTATCCTCAGTCTTTGCTTGAACACAAAATACAGCATGT  382

seq1  TCCATAAAGTGCTGCAAACACAGGGTAGAGAGAGAAGCTCTCTAAAGAGA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATAAAGTGCTGCAAACACAGGGTAGAGAGAGAAGCTCTCTAAAGAGA  432

seq1  AGTTTGCATTATAACAGTAGAAAGTCAGTGGACAGCTGTACGAAGCACCT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGCATTATAACAGTAGAAAGTCAGTGGACAGCTGTACGAAGCACCT  482

seq1  TTCCCAGAGTTTCCTGGCCCATGTAGAGCTGAAGCTGGGGCCTCGGGCCA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAGAGTTTCCTGGCCCATGTAGAGCTGAAGCTGGGGCCTCGGGCCA  532

seq1  GATTTATCTAGCTAACCTTCTTCTTTCCTGTCTTCTACTCTGCAAAGCTT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTATCTAGCTAACCTTCTTCTTTCCTGTCTTCTACTCTGCAAAGCTT  582

seq1  AACAAGACTGTCTTAGGGTGTTTGTTGTTGTTTTGTTTGCTGTGTTTTGC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGACTGTCTTAGGGTGTTTGTTGTTGTTTTGTTTGCTGTGTTTTGC  632

seq1  AACCTAGACTTACCCCCAGACCTATCTCCTCAGGTTCATATCTTACCCCT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAGACTTACCCCCAGACCTATCTCCTCAGGTTCATATCTTACCCCT  682

seq1  AGCTTTTTATATTCCTAAGTGCTCTTGGTAACAGACTGCAGAGCCCATTT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTTTATATTCCTAAGTGCTCTTGGTAACAGACTGCAGAGCCCATTT  732

seq1  CAATCTAGATAAGGACAATGAGACATTTTTCTAGTTTATGAATCTGAACC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTAGATAAGGACAATGAGACATTTTTCTAGTTTATGAATCTGAACC  782

seq1  TGGCTGTTCCAGACACAGCTAGAGCTAGTCTGGTGATGCTTTCTCTCCTC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGTTCCAGACACAGCTAGAGCTAGTCTGGTGATGCTTTCTCTCCTC  832

seq1  CTTCTACCCTGTCCTTTTTGTGCTCTTTCCCTCTCTCTGCCTATAGATAC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTACCCTGTCCTTTTTGTGCTCTTTCCCTCTCTCTGCCTATAGATAC  882

seq1  ATGCATAGCTATATTCATCTGTGTCCTTAAACACTCACTTTCCAATAAAT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATAGCTATATTCATCTGTGTCCTTAAACACTCACTTTCCAATAAAT  932

seq1  GTAAGATGTCCACTATTTTACATGTACCAGAAGAAAGATGCCAGACTTTT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGATGTCCACTATTTTACATGTACCAGAAGAAAGATGCCAGACTTTT  982

seq1  TCCAAATGATTTCTGCCACAGGCTCAGGCTAGGCTCTCAATGCTCCCAAC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAATGATTTCTGCCACAGGCTCAGGCTAGGCTCTCAATGCTCCCAAC  1032

seq1  CAAAGTACAAGCCATCTTTATAAGTGCAACTATGTTTCTGAAGTTGTGAT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTACAAGCCATCTTTATAAGTGCAACTATGTTTCTGAAGTTGTGAT  1082

seq1  CCAGCCACAAAGCCCCCTTTGGAAATAGCCAATGAATTC  1134
      |||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCACAAAGCCCCCTTTGGAAATAGCCAATGAATTC  1121