BAC Information

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BAC

Clone NameB6Ng01-146I18
Chromosome7 (Build37)4 (Build37)
Map Location 8,853,326 - 8,854,3618,331,138 - 8,331,596
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneVmn2r36, LOC638170, LOC100042662, LOC100041942, LOC100042673, LOC100041949, LOC100042681, LOC100042688, LOC100042695, LOC100041956, LOC100041961, LOC100042703, LOC100041967, LOC100042724, LOC100041977, LOC100041983, LOC100041989, LOC100041998, LOC100042009
Downstream geneLOC100042754, V2r14, EG628128, EG434109, LOC434110, EG628145, EG545909, LOC100042039, LOC100042781, LOC665539, LOC100042795, LOC100042060, EG665552, LOC100042790, LOC100042803, LOC665598, LOC100042810, LOC665593, EG665582, EG434113, EG665577, LOC665571, LOC100042083
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146I18.bB6Ng01-146I18.g
ACCDH943665DH943666
length1,035808
definitionDH943665|Mus musculus domesticus DNA, BAC clone: B6Ng01-146I18, 5' end.DH943666|Mus musculus domesticus DNA, BAC clone: B6Ng01-146I18, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(8,853,326 - 8,854,361)(8,331,138 - 8,331,596)
sequence
gaattctacgcaaatttattctttttattttttttaattagatattttct
ttatttgcatttcaaattctatcccaaaagtcccctctaccctccccctg
ccctgctccccaacccacccactcctgcttcctgaccctggcattcccct
ctactagggaatataatcttcataagaacaagagcctctcctcccaatga
tggtcgagtaggccatcttctgctaaatatgcagctaaaaacatgagctc
tgcgggaactggttagttcatattgttgttactcctaaacggttgcagac
accattagttccttgggtacattctctagctcctccattggaggctctat
gttccgtccagtagatgacagtgaacatccacttccggattagccacgca
ctgtcagagcctcacaagagacaggtatatcagggtcctgtcagaaactg
ttgctagcataggcgatagtgtcttataaaaatttataaaaacttactgt
cttatatgatatataaatatctaatatagaaattatataaatatatactt
ctctaattatataattataacatatgatatagaaaattataagatacaaa
taatataaatgtataatataaaatatatataaatataaagacttaagaca
atatacatacaatatatatactaaagtcttatgtacaatatatacacatt
taatataaaaataatatgaatatataaatatataactataatatataaca
tatatcctaagtataatacaaaataatataaatatatattgatatataat
gtaaaatatataaatatatgtttatatatataataaatagtgtcttttaa
aaatgtaaaaaacactaaacttgtagtggagaatgtggggaaaaacctcg
aaaatattttccaggggaaaaattcctgaacagaacagcagtggcttgta
ctgtaagatcaagaattgacaaatgagacctaataaattggaatcaaggt
gaaagagatgctggcgaagatgttgtaaaagagga
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
aggtagcgagattttattgagtatttttgcattgatatttataagggaaa
ctagtctgaaattctctatctttgttgggtatttctgtggttgaggtatc
agagtaattgtggcttcatagaatgagttgggtagagtaccttctatttc
tattttgtggaatagtttgtgtagaactggaattagatctcctttcaagg
tctggtagaactctgcactaacccatctggtcctggactttttttggctt
ttttgtaaatgactgcttctatttctttaggggatatgggactgtttaga
tcgttaatttaatcctgattttaactttggtacctggtatctgtctagaa
atttgtccatttcgtccaggtttttccagtttttgttgagtatagccttt
tgtagaaggatctgatggtgttttgggtttttttcaggatcgttgtatgt
cttccttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_8853326_8854361
seq2: B6Ng01-146I18.b_45_1079

seq1  GAATTCTACGCAAATTTATTCTTTTTATTTTTTTTAATTAGATATTTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACGCAAATTTATTCTTTTTATTTTTTTTAATTAGATATTTTCT  50

seq1  TTATTTGCATTTCAAATTCTATCCCAAAAGTCCCCTCTACCCTCCCCCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTGCATTTCAAATTCTATCCCAAAAGTCCCCTCTACCCTCCCCCTG  100

seq1  CCCTGCTCCCCAACCCACCCACTCCTGCTTCCTGACCCTGGCATTCCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCTCCCCAACCCACCCACTCCTGCTTCCTGACCCTGGCATTCCCCT  150

seq1  CTACTAGGGAATATAATCTTCATAAGAACAAGAGCCTCTCCTCCCAATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTAGGGAATATAATCTTCATAAGAACAAGAGCCTCTCCTCCCAATGA  200

seq1  TGGTCGAGTAGGCCATCTTCTGCTAAATATGCAGCTAAAAACATGAGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCGAGTAGGCCATCTTCTGCTAAATATGCAGCTAAAAACATGAGCTC  250

seq1  TGCGGGAACTGGTTAGTTCATATTGTTGTTACTCCTAAACGGTTGCAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGGGAACTGGTTAGTTCATATTGTTGTTACTCCTAAACGGTTGCAGAC  300

seq1  ACCATTAGTTCCTTGGGTACATTCTCTAGCTCCTCCATTGGAGGCTCTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTAGTTCCTTGGGTACATTCTCTAGCTCCTCCATTGGAGGCTCTAT  350

seq1  GTTCCGTCCAGTAGATGACAGTGAACATCCACTTCCGGATTAGCCACGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCGTCCAGTAGATGACAGTGAACATCCACTTCCGGATTAGCCACGCA  400

seq1  CTGTCAGAGCCTCACAAGAGACAGGTATATCAGGGTCCTGTCAGAAACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAGAGCCTCACAAGAGACAGGTATATCAGGGTCCTGTCAGAAACTG  450

seq1  TTGCTAGCATAGGCGATAGTGTCTTATAAAAATTTATAAAAACTTACTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAGCATAGGCGATAGTGTCTTATAAAAATTTATAAAAACTTACTGT  500

seq1  CTTATATGATATATAAATATCTAATATAGAAATTATATAAATATATACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATATGATATATAAATATCTAATATAGAAATTATATAAATATATACTT  550

seq1  CTCTAATTATATAATTATAACATATGATATAGAAAATTATAAGATACAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAATTATATAATTATAACATATGATATAGAAAATTATAAGATACAAA  600

seq1  TAATATAAATGTATAATATAAAATATATATAAATATAAAGACTTAAGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATAAATGTATAATATAAAATATATATAAATATAAAGACTTAAGACA  650

seq1  ATATACATACAATATATATACTAAAGTCTTATGTACAATATATACACATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACATACAATATATATACTAAAGTCTTATGTACAATATATACACATT  700

seq1  TAATATAAAAATAATATGAATATATAAATATATAACTATAATATATAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATAAAAATAATATGAATATATAAATATATAACTATAATATATAACA  750

seq1  TATATCCTAAGTATAATACAAAATAATATAAATATATATTGATATATAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCCTAAGTATAATACAAAATAATATAAATATATATTGATATATAAT  800

seq1  GTAAAATATATAAATATATGTTTATATATATAATAAATAGTGTCTTTTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAATATATAAATATATGTTTATATATATAATAAATAGTGTCTTTTAA  850

seq1  AAATGTAAAAAACACTAAAACTTGTAGTGGAGAATGTGGGGAAAAACCTC  900
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AAATGTAAAAAACACT-AAACTTGTAGTGGAGAATGTGGGGAAAAACCTC  899

seq1  GAAAATATTTTCCAGGGGAAAAATTCCTGAACAGAACAGCAGTGGCTTGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATATTTTCCAGGGGAAAAATTCCTGAACAGAACAGCAGTGGCTTGT  949

seq1  ACTGTAAGATCAAGAATTGACAAATGAGACCTAATAAAATTGGATC-AGG  999
      |||||||||||||||||||||||||||||||||||||| | | ||| |||
seq2  ACTGTAAGATCAAGAATTGACAAATGAGACCTAATAAATTGGAATCAAGG  999

seq1  TGATAGAAGATGCTGGCGAGGATGTTGTAAAAGAGGA  1036
      ||| || |||||||||||| |||||||||||||||||
seq2  TGAAAG-AGATGCTGGCGAAGATGTTGTAAAAGAGGA  1035

seq1: chr4_8331138_8331596
seq2: B6Ng01-146I18.g_420_874 (reverse)

seq1  AAAGGGAGACATAACAACAGATCCTG-AAGAAATCCAAAACACCATCAGA  49
      ||||| |||||| ||||| ||||||| || ||| ||||||||||||||||
seq2  AAAGGAAGACAT-ACAAC-GATCCTGAAAAAAACCCAAAACACCATCAGA  48

seq1  TCCTTCTACAAAAGGCTATACTCAAC-AAAACTGG-AAAACCTGGACTAA  97
      |||||||||||||||||||||||||| |||||||| ||||||||||| ||
seq2  TCCTTCTACAAAAGGCTATACTCAACAAAAACTGGAAAAACCTGGACGAA  98

seq1  ATGGACAAATTTCTAGACAGATACCAGGTACCAAAGTT-AAATCAGGATC  146
      |||||||||||||||||||||||||||||||||||||| |||||||||| 
seq2  ATGGACAAATTTCTAGACAGATACCAGGTACCAAAGTTAAAATCAGGATT  148

seq1  AAGTTAATGATCTAAACAGTCCCATATCCCCTAAAGAAATAGAAGCAGTC  196
      || |||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAACGATCTAAACAGTCCCATATCCCCTAAAGAAATAGAAGCAGTC  198

seq1  ATTAATAGTCTCCCAGCCAAAAAAAAGCCCAGGACCAGATGGGTTTAGTG  246
      ||| | |       |||| |||||||| ||||||||||||||| ||||||
seq2  ATTTACA---AAAAAGCC-AAAAAAAGTCCAGGACCAGATGGG-TTAGTG  243

seq1  CAGAGTTCTATCAGACCTTCAAAGAAGATCTAATTCCAGTTCTGCACAAA  296
      |||||||||| |||||||| |||| |||||||||||||||||| ||||||
seq2  CAGAGTTCTACCAGACCTTGAAAGGAGATCTAATTCCAGTTCTACACAAA  293

seq1  CTATTCCACAAAATAGAAGAAGAAGGTACTCTACCCAACTCATTCTATGA  346
      ||||||||||||||||||  ||||||||||||||||||||||||||||||
seq2  CTATTCCACAAAATAGAAATAGAAGGTACTCTACCCAACTCATTCTATGA  343

seq1  AGCTACAATTACTCTGATACCTAAACCACAGAAAGATCCAACAAAGATAG  396
      ||| |||||||||||||||||| ||||||||||| | |||||||||||||
seq2  AGCCACAATTACTCTGATACCTCAACCACAGAAATACCCAACAAAGATAG  393

seq1  AGATCTTCAGACCAATTTCCCTTATGAATATCGATGCAAAAATACTCAAT  446
      |||  ||||||| | |||||||||| |||||| |||||||||||||||||
seq2  AGAATTTCAGACTAGTTTCCCTTATAAATATCAATGCAAAAATACTCAAT  443

seq1  AAAATTCTCGCTA  459
      |||| ||||||||
seq2  AAAA-TCTCGCTA  455