BAC Information

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BAC

Clone NameB6Ng01-149K10
Chromosome7 (Build37)
Map Location 5,318,788 - 5,319,815
singlet/doubletsinglet
Overlap genenone
Upstream geneGp6, LOC100041851, Atp6v0c-ps1, Rdh13, Eps8l1, Ppp1r12c, Tnnt1, Tnni3, 6030429G01Rik, Syt5, Ptprh, LOC669557, Tmem86b, Saps1, EG628211, 1500019G21Rik, Brsk1, BC022651, Suv420h2, Cox6b2, 4930401F20Rik, Il11, 4930572D21Rik, 2210411K11Rik, Rpl28, Ube2s, D430041B17Rik, Isoc2b, Isoc2a, LOC384524, Zfp628, Nat14, A430110N23Rik, LOC665049, Gm1079, Gm1078, Zfp579, Fiz1, Zfp524, 6430526N21Rik, 4632433K11Rik, Zfp784, Zfp580, Ccdc106, U2af2, Epn1, Rfpl4, Rasl2-9, EG665126, V1rd5, V1rd3, EG665150, Nlrp2, EG272350
Downstream geneV1rd4, EG665163, V1rd10, EG630071, EG665255, EG636697, EG636705, LOC636731, LOC673215, V1rd2, LOC100041627, LOC100041637, V1rd1, LOC100041647, V1rd11, LOC100041666, V1rd6, EG384525, EG269859, Nlrp4c, Zfp787, Zfp444, Galp, Zfp371, EG627821, Zfp667, Zfp583, LOC100042467, LOC100042459, Zfp78
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149K10.bB6Ng01-149K10.g
ACCDH945933DH945934
length1,1661,025
definitionDH945933|Mus musculus domesticus DNA, BAC clone: B6Ng01-149K10, 5' end.DH945934|Mus musculus domesticus DNA, BAC clone: B6Ng01-149K10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagaggagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctgaggtcaaaaattcaggtgacagc
agatgctggcgtggaagtggagaaagaggaacactcctctattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagaaatacctctcctgggc
atatatccagaagataccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtacaactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcctaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaacactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagggacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagagtggatgctcacagtcagctaatggctggatcacagggctcccaa
tggaggagctagagaagtacccaaggagctaaagggatctgcaaccttat
agtgaacaacattttgacttacagtaccccggagctcttgactctagctg
caatgtatcaaaagatggctagtcgccatcactgcaagagagcccattgt
cccgcaaattattgccccagtacagggtacgctgggtctaaagggtgatg
gtgtggtatgggaatg
gaattcatttctgactatagaaaaaagaaggggcccttgaggaggtagga
aatggagaaaattaagcagcatattaactgtttgttaaaagtgggagaga
attggctggggatgtaactaagtggtagttattactcactgccagcatat
gtttgagaccctgaattctatccccagaaatacacgggagaaatacacac
accaccaccaccaccaccaccaccactttaatgaatcttattttatttta
ttttattttattttatttatgtgtataacctattaatctagtatatgtat
aatctatttttcttatgtgtaaatccattaatttatgtgtatatgtctgc
atgtgaatgcatacattcagataacttggagatcagaaaggggcattaaa
gtccctgagtctggaattataagtggtcatgggccacaaagcatgggtac
tgagaactgaattccattcctctgtaagagcagcgagcactcttaagttc
tgagccatctcttcagccttattttgaccagcttagatgtgtaggttcaa
gaccaatcttgaaacattaatgcttgatattggtagcatattccaatact
aactgctgaatagtgaccattacctgttggccatggattatacaaagatt
atcacatgcattgcctgtttttagtccacacaattactttatttgtttat
ttattttttatatttttattaggtattttcctcaattacatttccaatgc
tatcccaaaagtcccccatacccccccccccactcccctatccacccact
cccacttttttccctggcattccctgatgtccaatgggcctctctttcag
tgatggacgactaggcatcttttgatacatatgcagctagagtcaagagc
ttcgggggtactggatatgttcataatgttggtgcccctatagggtgcag
atccctttagctccttggggtctttctctagctcctccatgggggttctg
tgatccatccagtagctgactgtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_5318788_5319815
seq2: B6Ng01-149K10.g_66_1090

seq1  GAATTCATTTCTGACTATAGAAAAAAGAAGGGGCCCTTGAGGAGGTAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTCTGACTATAGAAAAAAGAAGGGGCCCTTGAGGAGGTAGGA  50

seq1  AATGGAGAAAATTAAGCAGCATATTAACTGTTTGTTAAAAGTGGGAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAGAAAATTAAGCAGCATATTAACTGTTTGTTAAAAGTGGGAGAGA  100

seq1  ATTGGCTGGGGATGTAACTAAGTGGTAGTTATTACTCACTGCCAGCATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCTGGGGATGTAACTAAGTGGTAGTTATTACTCACTGCCAGCATAT  150

seq1  GTTTGAGACCCTGAATTCTATCCCCAGAAATACACGGGAGAAATACACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAGACCCTGAATTCTATCCCCAGAAATACACGGGAGAAATACACAC  200

seq1  ACCACCACCACCACCACCACCACCACTTTAATGAATCTTATTTTATTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCACCACCACCACCACCACCACTTTAATGAATCTTATTTTATTTTA  250

seq1  TTTTATTTTATTTTATTTATGTGTATAACCTATTAATCTAGTATATGTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTTATTTTATTTATGTGTATAACCTATTAATCTAGTATATGTAT  300

seq1  AATCTATTTTTCTTATGTGTAAATCCATTAATTTATGTGTATATGTCTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTATTTTTCTTATGTGTAAATCCATTAATTTATGTGTATATGTCTGC  350

seq1  ATGTGAATGCATACATTCAGATAACTTGGAGATCAGAAAGGGGCATTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAATGCATACATTCAGATAACTTGGAGATCAGAAAGGGGCATTAAA  400

seq1  GTCCCTGAGTCTGGAATTATAAGTGGTCATGGGCCACAAAGCATGGGTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTGAGTCTGGAATTATAAGTGGTCATGGGCCACAAAGCATGGGTAC  450

seq1  TGAGAACTGAATTCCATTCCTCTGTAAGAGCAGCGAGCACTCTTAAGTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAACTGAATTCCATTCCTCTGTAAGAGCAGCGAGCACTCTTAAGTTC  500

seq1  TGAGCCATCTCTTCAGCCTTATTTTGACCAGCTTAGATGTGTAGGTTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCATCTCTTCAGCCTTATTTTGACCAGCTTAGATGTGTAGGTTCAA  550

seq1  GACCAATCTTGAAACATTAATGCTTGATATTGGTAGCATATTCCAATACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAATCTTGAAACATTAATGCTTGATATTGGTAGCATATTCCAATACT  600

seq1  AACTGCTGAATAGTGACCATTACCTGTTGGCCATGGATTATACAAAGATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCTGAATAGTGACCATTACCTGTTGGCCATGGATTATACAAAGATT  650

seq1  ATCACATGCATTGCCTGTTTTTAGTCCACACAATTACTTTATTTGTTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACATGCATTGCCTGTTTTTAGTCCACACAATTACTTTATTTGTTTAT  700

seq1  TTATTTTTTATATTTTTATTAGGTATTTTCCTCAATTACATTTCCAATGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTTATATTTTTATTAGGTATTTTCCTCAATTACATTTCCAATGC  750

seq1  TATCCCAAAAGTCCCCCATACCCCCCCCCCCACTCCCCTATCCACCCACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCAAAAGTCCCCCATACCCCCCCCCCCACTCCCCTATCCACCCACT  800

seq1  CCCACTTCTTTCCCTGGCATTCCCCTGATGTCCAATGGGCCTCTCTTTCC  850
      ||||||| ||||||||||||| |||||||||||||||||||||||||| |
seq2  CCCACTTTTTTCCCTGGCATT-CCCTGATGTCCAATGGGCCTCTCTTT-C  848

seq1  AGTGATGGACGACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAG  900
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AGTGATGGACGACTAGG-CATCTTTTGATACATATGCAGCTAGAGTCAAG  897

seq1  AGC-TCCGGGGTACT-GATTAGTTCATAATGTTGTTGCACCTATAGGGTT  948
      ||| || |||||||| |||  ||||||||||||| ||| ||||||||| |
seq2  AGCTTCGGGGGTACTGGATATGTTCATAATGTTGGTGCCCCTATAGGG-T  946

seq1  GCAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGGT  998
      |||||||||||||||||||||||  ||||||||||||||||||| |||||
seq2  GCAGATCCCTTTAGCTCCTTGGGGTCTTTCTCTAGCTCCTCCATGGGGGT  996

seq1  CTCTGTGATCCATCCAGTAGCTGACTGTGA  1028
       |||||||||||||||||||||||||||||
seq2  -TCTGTGATCCATCCAGTAGCTGACTGTGA  1025