BAC Information

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BAC

Clone NameB6Ng01-149L16
Chromosome7 (Build37)
Map Location 46,566,049 - 46,567,225
singlet/doubletsinglet
Overlap geneEG628058
Upstream geneLOC100038955, LOC100038967, LOC620018, LOC100038914, EG668531
Downstream geneEG668618, EG330513, EG434168, 9430025M13Rik, LOC100038985, 3000002G13Rik, EG215208, LOC100039133, LOC100039050, EG668540, 4930558N11Rik, EG628161
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149L16.bB6Ng01-149L16.g
ACCDH945989DH945990
length1,192261
definitionDH945989|Mus musculus domesticus DNA, BAC clone: B6Ng01-149L16, 5' end.DH945990|Mus musculus domesticus DNA, BAC clone: B6Ng01-149L16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatatgaccatcactgaccaggacactgcactctcttccctgtc
tgtgacatcccagtgtgataaaattttagatcccattaccatagcccctt
tccatccatcacttttaaccagttttgtccaagttacaccaccacaggta
acagatcaaggatacagcctggcaccttcctaccaggatggcagccaggt
gtactactacaaccacaacagcctggaccgtctgatacctggagaactag
gacagtgtctgcagtcctacagctcaatgtcctaccctgtgagggaggag
tctgcccctcaaccagagatgctgatggttggaaaggagattcagccaag
gaatgccctaataccaatctccccctctggcttctcctattccacatctg
gtcaaaatatgccagacatcagtcttccgggtaagtacaaactcaggagg
gaaaggcacgtgatcaagagtccaaaaatgctcaagtctacttttcggta
gtggatattccacacagccagagattatgagtctttactggttaaataga
gctctgcttttcatccccatcttcagactgaataatgatagagaatgcaa
gggcacagtgagtggtgtccatcctgcattcagtgatgtcaggaacacac
cacactcacacatgtgacagcacaagttagtcactatcacatccctgcac
actgttactgacaccttcaactactgctctggggtatagatgacaatgag
gactttttgttttggaaacttgggatttttctgtcagttgaaaactctct
ccagagcaatgcaactcaaaagctgtcctggaggaagaattcctcttata
tcccagcacctctcctggcattttctttacacttaaaattatagagagga
gtagggtgcagaacatgttaccattgctaaaggcagccaaggcttatttt
ccttattttttccttctgatgcagtacttcagaggggacccattgaagaa
caatataaggatcatgtagatgttttctctattggaaaatcataacaagc
caaaaataatttcattttcttaaattcaatttgattgttgccttcaggag
gtctgttagaatacaagggtctggaagaaagctcttttagtttaaatgct
tgtttctaaagaggaccgacttagttttgggatgcttaaacc

ttgtgtgctcttatgagacccatccccaacagcaggaatagggggtaact
ctgactcttttgcatgtgcttgggatctttttcctcttagtttttctatt
accttgtccaggcttgacatggctgcaaacagttttattataaattgtta
tgtcattgtttattgatgcctatctctgtgaggcctgctatgtagttgtt
gttgttgttgttgttgaaggtaaatggaagaggagttgatctaggagagg
gggaatttaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_46566049_46567225
seq2: B6Ng01-149L16.b_53_1244 (reverse)

seq1  GGTTTAGGCAT-CCAAAACTAGCTGGGCCCTCCTTTGAGACAAGCATTTA  49
      |||||| |||| |||||||||  | || |||| || || |||||||||||
seq2  GGTTTAAGCATCCCAAAACTAAGTCGGTCCTCTTTAGAAACAAGCATTTA  50

seq1  AAC-AAAAGAGCTTTCTTCCAG--CCCTGTA-TCTTACAGACCTCCTGTA  95
      ||| ||||||||||||||||||  || |||| ||| |||||||||||| |
seq2  AACTAAAAGAGCTTTCTTCCAGACCCTTGTATTCTAACAGACCTCCTGAA  100

seq1  AGCAACATGCAAATTG-ATGTAAGAAAATGAAAT--ATTTTGGCTTGGTT  142
       ||||||  ||||||| || ||||||||||||||   ||||||||| |||
seq2  GGCAACAATCAAATTGAATTTAAGAAAATGAAATTATTTTTGGCTT-GTT  149

seq1  ATGATTCTCCATTAGAGAAAACATCTACATGAT-CTTATATTGTTC-TCA  190
      |||||| |||| ||||||||||||||||||||| |||||||||||| |||
seq2  ATGATTTTCCAATAGAGAAAACATCTACATGATCCTTATATTGTTCTTCA  199

seq1  ATGGGTCACCTCTGAAGTACTGCATCAGAAGG-AAAAATAAGG-AAATTA  238
      ||||||| |||||||||||||||||||||||| |||||||||| |||| |
seq2  ATGGGTCCCCTCTGAAGTACTGCATCAGAAGGAAAAAATAAGGAAAATAA  249

seq1  GCCTTGGCTGCC-TTAGCAATGGT-ACATGTTCTGCACCCTACT-CTCTC  285
      |||||||||||| ||||||||||| ||||||||||||||||||| |||||
seq2  GCCTTGGCTGCCTTTAGCAATGGTAACATGTTCTGCACCCTACTCCTCTC  299

seq1  TATAATTTTAAGTGT-AAGAAAATGCCAGGAGAGGTGCTGGGATATAAGA  334
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TATAATTTTAAGTGTAAAGAAAATGCCAGGAGAGGTGCTGGGATATAAGA  349

seq1  GGAATTCTTCCTCCAGGACAGCTTTTGAGTTGCATTGCTCTGGAGAGAGT  384
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTCTTCCTCCAGGACAGCTTTTGAGTTGCATTGCTCTGGAGAGAGT  399

seq1  TTTCAACTGACAGAAAAATCCCAAGTTTCCAAAACAAAAAGTCCTCATTG  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAACTGACAGAAAAATCCCAAGTTTCCAAAACAAAAAGTCCTCATTG  449

seq1  TCATCTATACCCCAGAGCAGTAGTTGAAGGTGTCAGTAACAGTGTGCAGG  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTATACCCCAGAGCAGTAGTTGAAGGTGTCAGTAACAGTGTGCAGG  499

seq1  GATGTGATAGTGACTAACTTGTGCTGTCACATGTGTGAGTGTGGTGTGCT  534
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GATGTGATAGTGACTAACTTGTGCTGTCACATGTGTGAGTGTGGTGTGTT  549

seq1  CCTGACATCACTGAATGCAGGATGGACACCACTCACTGTGCCCTTGCATT  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACATCACTGAATGCAGGATGGACACCACTCACTGTGCCCTTGCATT  599

seq1  CTCTATCATTATTCAGTCTGAAGATGGGGATGAAAAGCAGAGCTCTATTT  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATCATTATTCAGTCTGAAGATGGGGATGAAAAGCAGAGCTCTATTT  649

seq1  AACCAGTAAAGACTCATAATCTCTGGCTGTGTGGAATATCCACTACCGAA  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGTAAAGACTCATAATCTCTGGCTGTGTGGAATATCCACTACCGAA  699

seq1  AAGTAGACTTGAGCATTTTTGGACTCTTGATCACGTGCCTTTCCCTCCTG  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGACTTGAGCATTTTTGGACTCTTGATCACGTGCCTTTCCCTCCTG  749

seq1  AGTTTGTACTTACCCGGAAGACTGATGTCTGGCATATTTTGACCAGATGT  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGTACTTACCCGGAAGACTGATGTCTGGCATATTTTGACCAGATGT  799

seq1  GGAATAGGAGAAGCCAGAGGGGGAGATTGGTATTAGGGCATTCCTTGGCT  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATAGGAGAAGCCAGAGGGGGAGATTGGTATTAGGGCATTCCTTGGCT  849

seq1  GAATCTCCTTTCCAACCATCAGCATCTCTGGTTGAGGGGCAGACTCCTCC  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTCCTTTCCAACCATCAGCATCTCTGGTTGAGGGGCAGACTCCTCC  899

seq1  CTCACAGGGTAGGACATTGAGCTGTAGGACTGCAGACACTGTCCTAGTTC  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAGGGTAGGACATTGAGCTGTAGGACTGCAGACACTGTCCTAGTTC  949

seq1  TCCAGGTATCAGACGGTCCAGGCTGTTGTGGTTGTAGTAGTACACCTGGC  984
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGTATCAGACGGTCCAGGCTGTTGTGGTTGTAGTAGTACACCTGGC  999

seq1  TGCCATCCTGGTAGGAAGGTGCCAGGCTGTATCCTTGATCTGTTACCTGT  1034
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATCCTGGTAGGAAGGTGCCAGGCTGTATCCTTGATCTGTTACCTGT  1049

seq1  GGTGGTGTAACTTGGACAAAACTGGTTAAAAGTGATGGATGGAAAGGGGC  1084
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTGTAACTTGGACAAAACTGGTTAAAAGTGATGGATGGAAAGGGGC  1099

seq1  TATGGTAATGGGATCTAAAATTTTATCACACTGGGATGTCACAGACAGGG  1134
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTAATGGGATCTAAAATTTTATCACACTGGGATGTCACAGACAGGG  1149

seq1  AAGAGAGTGCAGTGTCCTGGTCAGTGATGGTCATATTGAATTC  1177
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGTGCAGTGTCCTGGTCAGTGATGGTCATATTGAATTC  1192


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