BAC Information

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BAC

Clone NameB6Ng01-149P03
Chromosome7 (Build37)
Map Location 102,817,469 - 102,991,524
singlet/doubletdoublet
Overlap genenone
Upstream geneEG666816, LOC100040132, LOC666823
Downstream geneFrda-ps, EG666836, Odz4, LOC670727, LOC666858
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149P03.bB6Ng01-149P03.g
ACCDH946148DH946149
length9351,147
definitionDH946148|Mus musculus domesticus DNA, BAC clone: B6Ng01-149P03, 5' end.DH946149|Mus musculus domesticus DNA, BAC clone: B6Ng01-149P03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(102,817,469 - 102,818,407)(102,990,359 - 102,991,524)
sequence
gaattccagttgacatacaagatgaaatccatatgaaatatgtgccaaca
aagaggactatgtgtctccttagaacagaaactttcagtgttttgtctta
ttttggcagatatcaagccagaggtcttagtattatcggtgtaatagtct
cattcagaaaatgctacatatcttcatggtctttttatagcttttgatac
attggcaataaaacctaaattgtgttaaattatttcagttcttaccaact
taacctccatgcttgcagagagatagactcttttactatttgacctttct
gtctccttataaaagctccctatgcatgcaaaaagtgaaccttcagttac
taattcatgtataagtctctattaaattgggactgaagaccagcagacag
gctcagaaagggtatgactctaaaattgtatttgtttgatgtctttcatt
tttccataataagttgaagttctcagtataccagtacaacatagtttgtg
cacactgtctttaatgtaggtctaaaattaggatcatttagaagaaaaga
tcacagttatatgtctcaatttattaaaaaaatctcataaattatattgg
agattcacttatctctaggctgaataacaaatttccatacatccaacgcc
atagaacatgagacatttatttttctcatggtttccatggagccagccac
tctatacaaattcatctgtattttctacttaagggttccaaaggttcaag
ttaagaagtcattctgtagacacttgagtagggaggaatctggttctaat
tcaaacaactgtcagcagaacacacacatgatttgcaagaaaactctaaa
gtctctaacttaatcaggtgcaccattccacaacttgggcaaatctaata
agtggaatcaggtcacagttctgctcactagggca
gaattcaatagagagctgatgagtgttttgttttgttcctccccctcccc
ccaggtgtttgcctggacacctgagtctcctaggatcatatccacctacc
tcaattgccaagtttctatagaagatattcttgcccaactcctatcactc
aagagaacttctattctttgtatttgaaattattcttgagaatagcattt
gctatatatgtctattgtaatcttttaatgcactttttctttcaagttta
tatttatacatttgtgatagtaactatgtaaccaggacctttgtagtagt
cctgcaatttgtacattgtgagctcctttggtctctgagataatagataa
gaaatctaagaattagactgctgttttccatcaaaatattatcttccttt
ctttgaggatgtaaatttaaacccatgcccattctgcctatgaatccgat
gatctaaactatgtttttgcatctgaactgtaaaggttgccattttccac
aaaattatattaatgtaaaaataaaacagactgtgaaataaattgatgct
ccacccccagcaaaagtatttgcatatttctcagtagattatgagagcta
tgaatactttatcattaattcctgatatatattagtcaccaattgtttga
tgagatacaaatttggaaataagccaggcctagagaatattgcttagagg
ataggagtcaaagaaacagaagaagacagacggggaagtggagagagggg
gcaggaggtgattatatttctcatatccatactttaaagaagagcaagtt
taagtttagaatcaagaaagatcattctttatttaattgtcaggacatat
tggaggcaccactatatcacaaacttcagagtatcagcttgggctggtag
acatgaaaatatttaaatctaatttttgggtaccatagcttgtagattta
cagaggaaagaatggcaggggacgaggagaaaaaataaaaaaggaaataa
ggaaagggtaaaaggtgatgctgttctagcaaagcaggaagcacaccctg
tgcacacggcctgtagcgtggctgcaagtaagtacccggaaaataggcat
taaggcccatacttaagtctgctgattcgtgcactgagcaagagctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_102817469_102818407
seq2: B6Ng01-149P03.b_45_979

seq1  GAATTCCAGTTGACATACAAGATGAAATCCATATGAAATATGTGCCAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTTGACATACAAGATGAAATCCATATGAAATATGTGCCAACA  50

seq1  AAGAGGACTATGTGTCTCCTTAGAACAGAAACTTTCAGTGTTTTGTCTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGACTATGTGTCTCCTTAGAACAGAAACTTTCAGTGTTTTGTCTTA  100

seq1  TTTTGGCAGATATCAAGCCAGAGGTCTTAGTATTATCGGTGTAATAGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGCAGATATCAAGCCAGAGGTCTTAGTATTATCGGTGTAATAGTCT  150

seq1  CATTCAGAAAATGCTACATATCTTCATGGTCTTTTTATAGCTTTTGATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAGAAAATGCTACATATCTTCATGGTCTTTTTATAGCTTTTGATAC  200

seq1  ATTGGCAATAAAACCTAAATTGTGTTAAATTATTTCAGTTCTTACCAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCAATAAAACCTAAATTGTGTTAAATTATTTCAGTTCTTACCAACT  250

seq1  TAACCTCCATGCTTGCAGAGAGATAGACTCTTTTACTATTTGACCTTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTCCATGCTTGCAGAGAGATAGACTCTTTTACTATTTGACCTTTCT  300

seq1  GTCTCCTTATAAAAGCTCCCTATGCATGCAAAAAGTGAACCTTCAGTTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCTTATAAAAGCTCCCTATGCATGCAAAAAGTGAACCTTCAGTTAC  350

seq1  TAATTCATGTATAAGTCTCTATTAAATTGGGACTGAAGACCAGCAGACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCATGTATAAGTCTCTATTAAATTGGGACTGAAGACCAGCAGACAG  400

seq1  GCTCAGAAAGGGTATGACTCTAAAATTGTATTTGTTTGATGTCTTTCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGAAAGGGTATGACTCTAAAATTGTATTTGTTTGATGTCTTTCATT  450

seq1  TTTCCATAATAAGTTGAAGTTCTCAGTATACCAGTACAACATAGTTTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATAATAAGTTGAAGTTCTCAGTATACCAGTACAACATAGTTTGTG  500

seq1  CACACTGTCTTTAATGTAGGTCTAAAATTAGGATCATTTAGAAGAAAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTGTCTTTAATGTAGGTCTAAAATTAGGATCATTTAGAAGAAAAGA  550

seq1  TCACAGTTATATGTCTCAATTTATTAAAAAAATCTCATAAATTATATTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGTTATATGTCTCAATTTATTAAAAAAATCTCATAAATTATATTGG  600

seq1  AGATTCACTTATCTCTAGGCTGAATAACAAATTTCCATACATCCAACGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCACTTATCTCTAGGCTGAATAACAAATTTCCATACATCCAACGCC  650

seq1  ATAGAACATGAGACATTTATTTTTCTCATGGTTTCCATGGAGCCAGCCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAACATGAGACATTTATTTTTCTCATGGTTTCCATGGAGCCAGCCAC  700

seq1  TCTATACAAATTCATCTGTATTTTCTACTT-AGGGTTCCAAAGGTTCAAG  749
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TCTATACAAATTCATCTGTATTTTCTACTTAAGGGTTCCAAAGGTTCAAG  750

seq1  TTAAGAAGTCATTCTGTAGACACTTGAGTAGGGAGGAATCTGGTTCTATT  799
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTAAGAAGTCATTCTGTAGACACTTGAGTAGGGAGGAATCTGGTTCTAAT  800

seq1  CCACACAACTGTCAGCAG-ACACACACATGATTTGCAAGAAAACTCTAAA  848
       || |||||||||||||| |||||||||||||||||||||||||||||||
seq2  TCAAACAACTGTCAGCAGAACACACACATGATTTGCAAGAAAACTCTAAA  850

seq1  GTCTTCTAACTTAATCAGAGTGGCACCATTCCACAACTTTGGCATAATCT  898
      ||| |||||||||||||| || ||||||||||||||||| |||| |||||
seq2  GTC-TCTAACTTAATCAG-GT-GCACCATTCCACAACTTGGGCA-AATCT  896

seq1  ATTAGTTGGAATCAGTTCACAGGTTCTGCTCACCTAGGGCA  939
      | ||  ||||||||| ||||| |||||||||| ||||||||
seq2  AATAAGTGGAATCAGGTCACA-GTTCTGCTCA-CTAGGGCA  935

seq1: chr7_102990359_102991524
seq2: B6Ng01-149P03.g_68_1214 (reverse)

seq1  AAGCTCTTTGCTTCAGTGCACGGAATACAGCAAGACTTAAGTAAATGTGG  50
      |||||| |||| ||||||||| |||| |||| ||||||||||  ||| ||
seq2  AAGCTC-TTGC-TCAGTGCAC-GAAT-CAGC-AGACTTAAGT--ATG-GG  42

seq1  GCTTAATGGCTATTTTCTCGGGTACCTTACTTTTGCAGCCAACGCTACAA  100
       ||||||| |||||||| |||||| |||||  |||||||| ||||||| |
seq2  CCTTAATGCCTATTTTC-CGGGTA-CTTAC--TTGCAGCC-ACGCTAC-A  86

seq1  GGCCGTGTGCACAGGGTGTGCTTCCTGGCTTTGCTAGAAACAGCATCACC  150
      |||||||||||||||||||||||||| |||||||||| ||||||||||||
seq2  GGCCGTGTGCACAGGGTGTGCTTCCT-GCTTTGCTAG-AACAGCATCACC  134

seq1  TTTTACCCTTTCTTTATTTCCTTTTTTTATTTTTTTCTCTCGTCCCCTGC  200
      |||||||||||| |||||||| |||||||||||||   ||||||||||||
seq2  TTTTACCCTTTCCTTATTTCC-TTTTTTATTTTTTCTCCTCGTCCCCTGC  183

seq1  CATTCTTTCCTCTGTAAATTCTACAAGCTATGGTACCCAAAAATTAGATT  250
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CATTCTTTCCTCTGTAAA-TCTACAAGCTATGGTACCCAAAAATTAGATT  232

seq1  TAAATATTTTCATGTCTACCAGCCCAAGCTGATACTCTGAAGTTTGTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATTTTCATGTCTACCAGCCCAAGCTGATACTCTGAAGTTTGTGAT  282

seq1  ATAGTGGTGCCTCCAATATGTCCTGACAATTAAATAAAGAATGATCTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGGTGCCTCCAATATGTCCTGACAATTAAATAAAGAATGATCTTTC  332

seq1  TTGATTCTAAACTTAAACTTGCTCTTCTTTTAAAGTATGGATATGAGAAA  400
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TTGATTCTAAACTTAAACTTGCTCTTC-TTTAAAGTATGGATATGAGAAA  381

seq1  TATAATCACCTCCTGCCCCCTCTCTCCACTTCCCCGTCTGTCTTCTTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATCACCTCCTGCCCCCTCTCTCCACTTCCCCGTCTGTCTTCTTCTG  431

seq1  TTTCTTTGACTCCTATCCTCTAAGCAATATTCTCTAGGCCTGGCTTATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTGACTCCTATCCTCTAAGCAATATTCTCTAGGCCTGGCTTATTT  481

seq1  CCAAATTTGTATCTCATCAAACAATTGGTGACTAATATATATCAGGAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATTTGTATCTCATCAAACAATTGGTGACTAATATATATCAGGAATT  531

seq1  AATGATAAAGTATTCATAGCTCTCATAATCTACTGAGAAATATGCAAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATAAAGTATTCATAGCTCTCATAATCTACTGAGAAATATGCAAATA  581

seq1  CTTTTGCTGGGGGTGGAGCATCAATTTATTTCACAGTCTGTTTTATTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGCTGGGGGTGGAGCATCAATTTATTTCACAGTCTGTTTTATTTTT  631

seq1  ACATTAATATAATTTTGTGGAAAATGGCAACCTTTACAGTTCAGATGCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAATATAATTTTGTGGAAAATGGCAACCTTTACAGTTCAGATGCAA  681

seq1  AAACATAGTTTAGATCATCGGATTCATAGGCAGAATGGGCATGGGTTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATAGTTTAGATCATCGGATTCATAGGCAGAATGGGCATGGGTTTAA  731

seq1  ATTTACATCCTCAAAGAAAGGAAGATAATATTTTGATGGAAAACAGCAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACATCCTCAAAGAAAGGAAGATAATATTTTGATGGAAAACAGCAGT  781

seq1  CTAATTCTTAGATTTCTTATCTATTATCTCAGAGACCAAAGGAGCTCACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTCTTAGATTTCTTATCTATTATCTCAGAGACCAAAGGAGCTCACA  831

seq1  ATGTACAAATTGCAGGACTACTACAAAGGTCCTGGTTACATAGTTACTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACAAATTGCAGGACTACTACAAAGGTCCTGGTTACATAGTTACTAT  881

seq1  CACAAATGTATAAATATAAACTTGAAAGAAAAAGTGCATTAAAAGATTAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAATGTATAAATATAAACTTGAAAGAAAAAGTGCATTAAAAGATTAC  931

seq1  AATAGACATATATAGCAAATGCTATTCTCAAGAATAATTTCAAATACAAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGACATATATAGCAAATGCTATTCTCAAGAATAATTTCAAATACAAA  981

seq1  GAATAGAAGTTCTCTTGAGTGATAGGAGTTGGGCAAGAATATCTTCTATA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGAAGTTCTCTTGAGTGATAGGAGTTGGGCAAGAATATCTTCTATA  1031

seq1  GAAACTTGGCAATTGAGGTAGGTGGATATGATCCTAGGAGACTCAGGTGT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTTGGCAATTGAGGTAGGTGGATATGATCCTAGGAGACTCAGGTGT  1081

seq1  CCAGGCAAACACCTGGGGGGAGGGGGAGGAACAAAACAAAACACTCATCA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCAAACACCTGGGGGGAGGGGGAGGAACAAAACAAAACACTCATCA  1131

seq1  GCTCTCTATTGAATTC  1166
      ||||||||||||||||
seq2  GCTCTCTATTGAATTC  1147