BAC Information

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BAC

Clone NameB6Ng01-149P19
Chromosome7 (Build37)
Map Location 82,175,797 - 82,298,675
singlet/doubletdoublet
Overlap geneSv2b
Upstream geneLOC100042127, LOC100042140, LOC546979, Slco3a1, EG665308, EG665641, 0610006L08Rik
Downstream gene1500012K07Rik, LOC100042171, Akap13, Klhl25, LOC100042210
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149P19.bB6Ng01-149P19.g
ACCDH946180DH946181
length1,139388
definitionDH946180|Mus musculus domesticus DNA, BAC clone: B6Ng01-149P19, 5' end.DH946181|Mus musculus domesticus DNA, BAC clone: B6Ng01-149P19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(82,175,797 - 82,176,932)(82,298,282 - 82,298,675)
sequence
gaattcctatattgacactgttccgtgaatgtcatggaacatacactgta
tagttttaatttgattttaatttatgagtctatttactttatgtatttac
atgctttctacatttaagtgatgactaaaaattcatgttttgaccacatt
gcatgcactttatgtacatctctctgattaaagtatatccagcaagaaag
caatttatacttccacaattcaataacatatctatgtttaaaataaacat
agatatgaaacagactttgatagatatacaaatattatatagtatgatgt
taaggtttttatattgatctaaattttaaaggtctcatcactttaatata
aatcaggcagtacatagatttttctttttaccaaaatacttaatttagat
agcatattctagagtatataaatactattcaggaaaaaattatttctaaa
aatatacttatccaggtggagaaatcctagaagctatataaggccccaga
aataattactgctgactttttaaaataaatacagaaactatatttgagaa
taaatattatttatctaacagagaattatgaaattatgtaaaagaaatga
ataagaacctgatatttgtaccatgtaaacatactctatataaaaacata
aatgttctacttaaagactctagcatttatagaatctttcccccaaaaaa
gtaacaaaaaatgatagtttccaattccttcccatattactgactgattg
tcatcactaaagaaacttgatactgcagtgtctgggataatctatatgga
gactagtcctcacgaatggactcactagcagtgggctatgtgtcactagg
tggtgaaaagattaagttttctattacttctcagctcctctttaaataaa
actgtccaggacaacgttagtggctgtagtgtaaggaggcagtcttcaac
aaccctgagttcctcaccatgactcagaacctccagtgcaagccagaaca
ccatacactgaacacacacacacacacactcacacacggaagaagtgagc
cttgtgtcctcttatacatcagccttactttagtctccccccccatctag
cttttcttctgattagctcaaaggaactaatttttaaaa
accttagactccctgccaggccgaagcacagtgattcccagggtgcaaac
catcctgagaatattttctagatgatattaatggcgctagctttcctcct
ggaagcagtaggcatggctactctgtttacagggcacaggtacaaaggca
gcatgtcttcaactcagacagcaagcagtgaggccatgacttcctctggt
tagatcagcctaaaacaggctctcacctcaaccaggcaccacttacttgg
aagatgcaggtcctggctgggctagaaagtacgtctttcttcacccatgg
aagcgagcacaggatgatccatgccatgtgtctgcagcacagtgggtgaa
gtggggcaggaagggtggaaatgggtgatgtgagagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_82175797_82176932
seq2: B6Ng01-149P19.b_49_1187

seq1  GAATTCCTATATTGACACTGTTCCGTGAATGTCATGGAACATACACTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATATTGACACTGTTCCGTGAATGTCATGGAACATACACTGTA  50

seq1  TAGTTTTAATTTGATTTTAATTTATGAGTCTATTTACTTTATGTATTTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTTAATTTGATTTTAATTTATGAGTCTATTTACTTTATGTATTTAC  100

seq1  ATGCTTTCTACATTTAAGTGATGACTAAAAATTCATGTTTTGACCACATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTTCTACATTTAAGTGATGACTAAAAATTCATGTTTTGACCACATT  150

seq1  GCATGCACTTTATGTACATCTCTCTGATTAAAGTATATCCAGCAAGAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCACTTTATGTACATCTCTCTGATTAAAGTATATCCAGCAAGAAAG  200

seq1  CAATTTATACTTCCACAATTCAATAACATATCTATGTTTAAAATAAACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTATACTTCCACAATTCAATAACATATCTATGTTTAAAATAAACAT  250

seq1  AGATATGAAACAGACTTTGATAGATATACAAATATTATATAGTATGATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATGAAACAGACTTTGATAGATATACAAATATTATATAGTATGATGT  300

seq1  TAAGGTTTTTATATTGATCTAAATTTTAAAGGTCTCATCACTTTAATATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTTTTTATATTGATCTAAATTTTAAAGGTCTCATCACTTTAATATA  350

seq1  AATCAGGCAGTACATAGATTTTTCTTTTTACCAAAATACTTAATTTAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGGCAGTACATAGATTTTTCTTTTTACCAAAATACTTAATTTAGAT  400

seq1  AGCATATTCTAGAGTATATAAATACTATTCAGGAAAAAATTATTTCTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATATTCTAGAGTATATAAATACTATTCAGGAAAAAATTATTTCTAAA  450

seq1  AATATACTTATCCAGGTGGAGAAATCCTAGAAGCTATATAAGGCCCCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATACTTATCCAGGTGGAGAAATCCTAGAAGCTATATAAGGCCCCAGA  500

seq1  AATAATTACTGCTGACTTTTTAAAATAAATACAGAAACTATATTTGAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTACTGCTGACTTTTTAAAATAAATACAGAAACTATATTTGAGAA  550

seq1  TAAATATTATTTATCTAACAGAGAATTATGAAATTATGTAAAAGAAATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATTATTTATCTAACAGAGAATTATGAAATTATGTAAAAGAAATGA  600

seq1  ATAAGAACCTGATATTTGTACCATGTAAACATACTCTATATAAAAACATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAACCTGATATTTGTACCATGTAAACATACTCTATATAAAAACATA  650

seq1  AATGTTCTACTTAAAGACTCTAGCATTTATAGAATCTTTCCCCCAAAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTCTACTTAAAGACTCTAGCATTTATAGAATCTTTCCCCCAAAAAA  700

seq1  GTAACAAAAAATGATAGTTTCCAATTCCTTCCCATATTACTGACTGATTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACAAAAAATGATAGTTTCCAATTCCTTCCCATATTACTGACTGATTG  750

seq1  TCATCACTAAAGAAACTTGATACTGCAGTGTCTGGGATAATCTATATGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCACTAAAGAAACTTGATACTGCAGTGTCTGGGATAATCTATATGGA  800

seq1  GACTAGTCCTCACGAATGGACTCACTAGCAGTGGGCTATGTGTCACTAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGTCCTCACGAATGGACTCACTAGCAGTGGGCTATGTGTCACTAGG  850

seq1  TGGTGAAAAGATTAAGTTTTCTATTACTTCTCAGCTCCTCTTTAAATAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAAAAGATTAAGTTTTCTATTACTTCTCAGCTCCTCTTTAAATAAA  900

seq1  ACTGTCCAGGACAACGTTAGTGGCTGTAGGTGTAAGGAGGCAGTCTTCAA  950
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ACTGTCCAGGACAACGTTAGTGGCTGTA-GTGTAAGGAGGCAGTCTTCAA  949

seq1  CAA-CCTGAGTTCCTCACCATGACTCAGAACCTCCAAGTGCAAGCCAAGA  999
      ||| ||||||||||||||||||||||||||||||| |||||||||| |||
seq2  CAACCCTGAGTTCCTCACCATGACTCAGAACCTCC-AGTGCAAGCC-AGA  997

seq1  ACA-CATACACTGAACACACACACACACACACACACACACGGAAGAAGTG  1048
      ||| |||||||||||||||||||||||||||| |||||||||||||||||
seq2  ACACCATACACTGAACACACACACACACACACTCACACACGGAAGAAGTG  1047

seq1  AG-CTTGTGTCCTCTTATACATCAGCCTACTTTTAGTCTCCCCCACAATC  1097
      || |||||||||||||||||||||||||   ||||||||||||| | |||
seq2  AGCCTTGTGTCCTCTTATACATCAGCCTTACTTTAGTCTCCCCCCCCATC  1097

seq1  TAGCTTTTC-TCTGATTAGCTCAAAGG-ACT-ATTTTTAAAA  1136
      ||||||||| ||||||||||||||||| ||| ||||||||||
seq2  TAGCTTTTCTTCTGATTAGCTCAAAGGAACTAATTTTTAAAA  1139

seq1: chr7_82298282_82298675
seq2: B6Ng01-149P19.g_68_461 (reverse)

seq1  TCCTCTCACATCACCCATTTCCACCCTTCCTGCCCCACTTCACCCACTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTCACATCACCCATTTCCACCCTTCCTGCCCCACTTCACCCACTGT  50

seq1  GCTGCAGACACATGGCATGGATCATCCTGTGCTCGCTTCCATGGGTGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCAGACACATGGCATGGATCATCCTGTGCTCGCTTCCATGGGTGAAG  100

seq1  AAAGACGTACTTTCTAGCCCAGCCAGGACCTGCATCTTCCAAGTAAGTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACGTACTTTCTAGCCCAGCCAGGACCTGCATCTTCCAAGTAAGTGG  150

seq1  TGCCTGGTTGAGGTGAGAGCCTGTTTTAGGCTGATCTAACCAGAGGAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGGTTGAGGTGAGAGCCTGTTTTAGGCTGATCTAACCAGAGGAAGT  200

seq1  CATGGCCTCACTGCTTGCTGTCTGAGTTGAAGACATGCTGCCTTTGTACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCCTCACTGCTTGCTGTCTGAGTTGAAGACATGCTGCCTTTGTACC  250

seq1  TGTGCCCTGTAAACAGAGTAGCCATGCCTACTGCTTCCAGGAGGAAAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCCTGTAAACAGAGTAGCCATGCCTACTGCTTCCAGGAGGAAAGCT  300

seq1  AGCGCCATTAATATCATCTAGAAAATATTCTCAGGATGGTTTGCACCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGCCATTAATATCATCTAGAAAATATTCTCAGGATGGTTTGCACCCTG  350

seq1  GGAATCACTGTGCTTCGGCCTGGCAGGGAGTCTAAGGTGAATTC  394
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCACTGTGCTTCGGCCTGGCAGGGAGTCTAAGGTGAATTC  394