BAC Information

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BAC

Clone NameB6Ng01-151E02
Chromosome7 (Build37)
Map Location 3,090,834 - 3,206,878
singlet/doubletdoublet
Overlap geneLOC627003, EG664817, Speer9-ps1, AU018091, LOC100041503
Upstream geneLOC100041028
Downstream geneNlrp12, GA_x5J8B7W3939-136239-135295, LOC384710, Myadm, Prkcc, Cacng7, LOC672553, Cacng8, Cacng6, LOC100041095, 9930022N03Rik, LOC100041109, Oscar, Ndufa3, Tfpt, Prpf31, Cnot3, Leng1, Tmc4, Leng4, Tsen34, Rps9, Lilrb3, Pira1, LOC100041137, LOC100041146, Pira2, LOC675749, LOC100038908, LOC100038909, Pira11, Pira3, LOC100041186, LOC664841, Lair1, Ttyh1, Leng8, Leng9, Cdc42ep5, LOC384521, EG232801
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151E02.bB6Ng01-151E02.g
ACCDH947124DH947125
length1,066930
definitionDH947124|Mus musculus domesticus DNA, BAC clone: B6Ng01-151E02, 5' end.DH947125|Mus musculus domesticus DNA, BAC clone: B6Ng01-151E02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(3,090,834 - 3,091,908)(3,205,950 - 3,206,878)
sequence
gaattcagtccaatttctcttttttaaccactccgtgcaaatttacttat
cttcataataaggaagaacatgtcttcattgtatatttaaaattataaaa
ttagatactgttataggacagaaggtaattgggttcataagaagtgatgt
gaggaacatgctcatggatttggaaccagtcacgactatgatgtgtcctg
attattgaaaattaatatcagaatgacatagttgaatgtctttaggaagg
tgacttgtgggtgacactgatcctaaaatgcctcctgtatttttgtctat
agagaaaaacataggaaaaagaaaaaaatggggtacatccaggaaacagg
tctagaggccattaaatattcccaaagggaaagtttcaaacagttgttta
aagtgttttaccaggtcgcatgaaagatatactttcaaataaaattggtg
tgaaataggtgagtgttggagaccatatcatgagaaagtaagccttttgc
agtttcccaccttaacaagccaaatggccttgcgttaaggagccagtcgc
ctcctcctccctattcccttcctggcaccaaagaccctaaaaagttgaat
tatagtcccctcttccttatctcttcctgactcccaagacttctaaggac
atgagttatgtgctgagcccagcttgacacccaggactgttaaggaggaa
tctacactctggagataagactcaggatgcctcctgcctgcagtctgaat
tcagccttcatgtccccagatgcccacttctttgttctttgttaattccc
cctcagcccctccctattttctctcactgtgtgcttataatcaggctcct
agccttctttaaacagaccttgacaactctttgcttggtctcgattcttc
caccatcccacccccccccccccggccctttctccttcagtttgcagtcc
cctcatacccacaaatactgggtcctgctggacgggacaggtgagcgaag
ctttacttattctttccactttctctctattttgggtatccaaagatccc
tgaactttccaacaaa
gaattcctccttgaaattgccagctccttagataaattccattgcccaga
acactggggctgtgctgctccccgccctgccccccaacacactgggaggt
ttgccccatccagggcagagcattgtgacaatccggatccctaggaagag
attctaaagacacctgcgcccttcccgagggctaacagattattgagaca
atggttctcaaggaaatggaatttcctcaggaatcccatgctgggcaaag
gggaaaggctggagcctggtgtcagccagaggagggaacctgtcccctag
gaagagattccaaactgctctggtcaccttgctgggagccaaggtgacca
gataggttagagaggtggggatcacaccttttgtaatttggctactctgc
tggtttggttaccttactttagacacgtagccagtctcacctgtttcggg
ctgctggacccagggtctggccttaaccgattcacttacagcctcccgaa
tcatacacagttcttgagtgctagttgaatggatgagagagttaaaagta
tgttcagaagcaagtagctgtagggactaccgtgaagtagaattaatttg
ccttcccatgacgttccagtatgaaacacacatcctgctgaacaccatac
cagtctagtgaacaatgtatatttcctcttttactgaataattttctttt
tcgagacaaggtcttgatcatatagctctggctgtttaataagacccact
gtgtagatcaggctagctccaaactctaataagagtgtccctgcctgtgt
atcactatacctggcctgaccacttcccccccttctttctttctttcttt
ctttcttctttctttctttcttctttctttcttctttttttttttttttt
tttcccgatgacagggtttttgtggtatag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_3090834_3091908
seq2: B6Ng01-151E02.b_43_1108

seq1  GAATTCAGTCCAATTTCTCTTTTTTAACCACTCCGTGCAAATTTACTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCCAATTTCTCTTTTTTAACCACTCCGTGCAAATTTACTTAT  50

seq1  CTTCATAATAAGGAAGAACATGTCTTCATTGTATATTTAAAATTATAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATAATAAGGAAGAACATGTCTTCATTGTATATTTAAAATTATAAAA  100

seq1  TTAGATACTGTTATAGGACAGAAGGTAATTGGGTTCATAAGAAGTGATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATACTGTTATAGGACAGAAGGTAATTGGGTTCATAAGAAGTGATGT  150

seq1  GAGGAACATGCTCATGGATTTGGAACCAGTCACGACTATGATGTGTCCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAACATGCTCATGGATTTGGAACCAGTCACGACTATGATGTGTCCTG  200

seq1  ATTATTGAAAATTAATATCAGAATGACATAGTTGAATGTCTTTAGGAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTGAAAATTAATATCAGAATGACATAGTTGAATGTCTTTAGGAAGG  250

seq1  TGACTTGTGGGTGACACTGATCCTAAAATGCCTCCTGTATTTTTGTCTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTGTGGGTGACACTGATCCTAAAATGCCTCCTGTATTTTTGTCTAT  300

seq1  AGAGAAAAACATAGGAAAAAGAAAAAAATGGGGTACATCCAGGAAACAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAAACATAGGAAAAAGAAAAAAATGGGGTACATCCAGGAAACAGG  350

seq1  TCTAGAGGCCATTAAATATTCCCAAAGGGAAAGTTTCAAACAGTTGTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAGGCCATTAAATATTCCCAAAGGGAAAGTTTCAAACAGTTGTTTA  400

seq1  AAGTGTTTTACCAGGTCGCATGAAAGATATACTTTCAAATAAAATTGGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTTTTACCAGGTCGCATGAAAGATATACTTTCAAATAAAATTGGTG  450

seq1  TGAAATAGGTGAGTGTTGGAGACCATATCATGAGAAAGTAAGCCTTTTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATAGGTGAGTGTTGGAGACCATATCATGAGAAAGTAAGCCTTTTGC  500

seq1  AGTTTCCCACCTTAACAAGCCAAATGGCCTTGCGTTAAGGAGCCAGTCGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCCCACCTTAACAAGCCAAATGGCCTTGCGTTAAGGAGCCAGTCGC  550

seq1  CTCCTCCTCCCTATTCCCTTCCTGGCACCAAAGACCCTAAAAAGTTGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCTCCCTATTCCCTTCCTGGCACCAAAGACCCTAAAAAGTTGAAT  600

seq1  TATAGTCCCCTCTTCCTTATCTCTTCCTGACTCCCAAGACTTCTAAGGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTCCCCTCTTCCTTATCTCTTCCTGACTCCCAAGACTTCTAAGGAC  650

seq1  ATGAGTTATGTGCTGAGCCCAGCTTGACACCCAGGACTGTTAAGGAGGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTTATGTGCTGAGCCCAGCTTGACACCCAGGACTGTTAAGGAGGAA  700

seq1  TCTACACTCTGGAGATAAGACTCAGGATGCCTCCTGCCTGCAGTCTGAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACACTCTGGAGATAAGACTCAGGATGCCTCCTGCCTGCAGTCTGAAT  750

seq1  TCAGCCTTCATGTCCCCAGATGCCCACTTCTTTGTTCTTTGTTAATTCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCTTCATGTCCCCAGATGCCCACTTCTTTGTTCTTTGTTAATTCCC  800

seq1  CCTCAGCCCCTCCCTATTTTCTCTCACTGTGTGCTTATAATCAGGCTCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGCCCCTCCCTATTTTCTCTCACTGTGTGCTTATAATCAGGCTCCT  850

seq1  AGCCTTCTTTAAACAGACCTTGACAACTCTTTGCTTGGTCTCGATTCTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTCTTTAAACAGACCTTGACAACTCTTTGCTTGGTCTCGATTCTTC  900

seq1  CACCCATCCCACCCCCCCCCCCCCGGCCCTTTCTCTTTCAGGTTTGCAGT  950
      || |||||||||||||||||||||||||||||||| |||| |||||||||
seq2  CA-CCATCCCACCCCCCCCCCCCCGGCCCTTTCTCCTTCA-GTTTGCAGT  948

seq1  CCCCCTCATACCCACAAATAACTGGGTCCTGCTGGACGGGACAGGTGAGC  1000
       |||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  -CCCCTCATACCCACAAAT-ACTGGGTCCTGCTGGACGGGACAGGTGAGC  996

seq1  GAAAGCTTTACCTATTCTTTCCACTTTCTCTCTATTTTGGGGTTATCCAA  1050
      | ||||||||| |||||||||||||||||||||||||||||  |||||||
seq2  G-AAGCTTTACTTATTCTTTCCACTTTCTCTCTATTTTGGG--TATCCAA  1043

seq1  AGAACCCTGAAACCTTTCCAACAAA  1075
      ||| |||||||  ||||||||||||
seq2  AGATCCCTGAA--CTTTCCAACAAA  1066

seq1: chr7_3205950_3206878
seq2: B6Ng01-151E02.g_68_996 (reverse)

seq1  TATA-CACAAAAACCCTGTC-TCGGAAAAAAAAAAAAAAAAAAAGAAAGA  48
      |||| ||||||||||||||| |||| ||||||||||||||||||  ||||
seq2  TATACCACAAAAACCCTGTCATCGGGAAAAAAAAAAAAAAAAAAAGAAGA  50

seq1  AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAG  98
      ||||||| ||||||||||||||| ||||||||||||||||||||||||||
seq2  AAGAAAG-AAGAAAGAAAGAAAG-AAGAAAGAAAGAAAGAAAGAAAGAAG  98

seq1  GGGGGGAAGTGGTCAGGCCAGGTATAGTGATACACAGGCAGGGACACTCT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGAAGTGGTCAGGCCAGGTATAGTGATACACAGGCAGGGACACTCT  148

seq1  TATTAGAGTTTGGAGCTAGCCTGATCTACACAGTGGGTCTTATTAAACAG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGAGTTTGGAGCTAGCCTGATCTACACAGTGGGTCTTATTAAACAG  198

seq1  CCAGAGCTATATGATCAAGACCTTGTCTCGAAAAAGAAAATTATTCAGTA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGCTATATGATCAAGACCTTGTCTCGAAAAAGAAAATTATTCAGTA  248

seq1  AAAGAGGAAATATACATTGTTCACTAGACTGGTATGGTGTTCAGCAGGAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGGAAATATACATTGTTCACTAGACTGGTATGGTGTTCAGCAGGAT  298

seq1  GTGTGTTTCATACTGGAACGTCATGGGAAGGCAAATTAATTCTACTTCAC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTTTCATACTGGAACGTCATGGGAAGGCAAATTAATTCTACTTCAC  348

seq1  GGTAGTCCCTACAGCTACTTGCTTCTGAACATACTTTTAACTCTCTCATC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTCCCTACAGCTACTTGCTTCTGAACATACTTTTAACTCTCTCATC  398

seq1  CATTCAACTAGCACTCAAGAACTGTGTATGATTCGGGAGGCTGTAAGTGA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAACTAGCACTCAAGAACTGTGTATGATTCGGGAGGCTGTAAGTGA  448

seq1  ATCGGTTAAGGCCAGACCCTGGGTCCAGCAGCCCGAAACAGGTGAGACTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGGTTAAGGCCAGACCCTGGGTCCAGCAGCCCGAAACAGGTGAGACTG  498

seq1  GCTACGTGTCTAAAGTAAGGTAACCAAACCAGCAGAGTAGCCAAATTACA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACGTGTCTAAAGTAAGGTAACCAAACCAGCAGAGTAGCCAAATTACA  548

seq1  AAAGGTGTGATCCCCACCTCTCTAACCTATCTGGTCACCTTGGCTCCCAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTGTGATCCCCACCTCTCTAACCTATCTGGTCACCTTGGCTCCCAG  598

seq1  CAAGGTGACCAGAGCAGTTTGGAATCTCTTCCTAGGGGACAGGTTCCCTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTGACCAGAGCAGTTTGGAATCTCTTCCTAGGGGACAGGTTCCCTC  648

seq1  CTCTGGCTGACACCAGGCTCCAGCCTTTCCCCTTTGCCCAGCATGGGATT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGCTGACACCAGGCTCCAGCCTTTCCCCTTTGCCCAGCATGGGATT  698

seq1  CCTGAGGAAATTCCATTTCCTTGAGAACCATTGTCTCAATAATCTGTTAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGGAAATTCCATTTCCTTGAGAACCATTGTCTCAATAATCTGTTAG  748

seq1  CCCTCGGGAAGGGCGCAGGTGTCTTTAGAATCTCTTCCTAGGGATCCGGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCGGGAAGGGCGCAGGTGTCTTTAGAATCTCTTCCTAGGGATCCGGA  798

seq1  TTGTCACAATGCTCTGCCCTGGATGGGGCAAACCTCCCAGTGTGTTGGGG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCACAATGCTCTGCCCTGGATGGGGCAAACCTCCCAGTGTGTTGGGG  848

seq1  GGCAGGGCGGGGAGCAGCACAGCCCCAGTGTTCTGGGCAATGGAATTTAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGGCGGGGAGCAGCACAGCCCCAGTGTTCTGGGCAATGGAATTTAT  898

seq1  CTAAGGAGCTGGCAATTTCAAGGAGGAATTC  929
      |||||||||||||||||||||||||||||||
seq2  CTAAGGAGCTGGCAATTTCAAGGAGGAATTC  929